RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 SRP19P09132 144 aaKnown RBP10.66□□□□□ -0.7
TPM1-226ENST00000560959 LINC01547P58512 204 aaPredicted RBP10.66□□□□□ -0.7
TPM1-226ENST00000560959 AMELXQ99217 191 aa10.66□□□□□ -0.7
TPM1-226ENST00000560959 RPL37AP8A6NKH3 93 aa10.65□□□□□ -0.7
TPM1-226ENST00000560959 PRSS47A8MTI9 375 aa10.65□□□□□ -0.7
TPM1-226ENST00000560959 NPSP0C0P6 89 aa10.65□□□□□ -0.7
TPM1-226ENST00000560959 UBE2AP49459 152 aa10.64□□□□□ -0.71
TPM1-226ENST00000560959 RPL23P62829 140 aaKnown RBP10.64□□□□□ -0.71
TPM1-226ENST00000560959 ALKAL2Q6UX46 152 aa10.64□□□□□ -0.71
TPM1-226ENST00000560959 ORMDL3Q8N138 153 aa10.64□□□□□ -0.71
TPM1-226ENST00000560959 VCX2Q9H322 139 aa10.64□□□□□ -0.71
TPM1-226ENST00000560959 IGLV5-37A0A075B6J1 123 aa10.63□□□□□ -0.71
TPM1-226ENST00000560959 CXCL5P42830 114 aa10.63□□□□□ -0.71
TPM1-226ENST00000560959 C2orf66Q6UXQ4 117 aa10.63□□□□□ -0.71
TPM1-226ENST00000560959 A0A1B0GXF2 115 aa10.62□□□□□ -0.71
TPM1-226ENST00000560959 SEC11AP67812 179 aa10.62□□□□□ -0.71
TPM1-226ENST00000560959 TMEM136Q6ZRR5 245 aa10.62□□□□□ -0.71
TPM1-226ENST00000560959 HERVK_113P63121 156 aa10.61□□□□□ -0.71
TPM1-226ENST00000560959 FP248Q71RG6 208 aaPredicted RBP10.61□□□□□ -0.71
TPM1-226ENST00000560959 CYSLTR1Q9Y271 337 aa10.61□□□□□ -0.71
TPM1-226ENST00000560959 ASB16-AS1Q495Z4 193 aa10.6□□□□□ -0.71
TPM1-226ENST00000560959 SPAG11AQ6PDA7 123 aa10.6□□□□□ -0.71
TPM1-226ENST00000560959 PRELID3AQ96N28 172 aa10.6□□□□□ -0.71
TPM1-226ENST00000560959 PNRC1Q12796 327 aaPredicted RBP10.59□□□□□ -0.71
TPM1-226ENST00000560959 ADIRFQ15847 76 aa10.59□□□□□ -0.71
TPM1-226ENST00000560959 ZC2HC1BQ5TFG8 222 aa10.59□□□□□ -0.71
TPM1-226ENST00000560959 MRPL54Q6P161 138 aaKnown RBP10.59□□□□□ -0.71
TPM1-226ENST00000560959 LAMTOR2Q9Y2Q5 125 aa10.59□□□□□ -0.71
TPM1-226ENST00000560959 GAGE10A6NGK3 116 aa10.58□□□□□ -0.72
TPM1-226ENST00000560959 CDKN2A-AS1Q9UH64 79 aa10.58□□□□□ -0.72
TPM1-226ENST00000560959 NAT8Q9UHE5 227 aa10.58□□□□□ -0.72
TPM1-226ENST00000560959 IGIPA6NJ69 53 aa10.57□□□□□ -0.72
TPM1-226ENST00000560959 LINC00337Q8N6G1 96 aa10.57□□□□□ -0.72
TPM1-226ENST00000560959 PAPPA-AS1Q5QFB9 102 aa10.56□□□□□ -0.72
TPM1-226ENST00000560959 NKAPP1Q8N9T2 125 aa10.56□□□□□ -0.72
TPM1-226ENST00000560959 K7EMI3 77 aa10.55□□□□□ -0.72
TPM1-226ENST00000560959 ORMDL2Q53FV1 153 aa10.55□□□□□ -0.72
TPM1-226ENST00000560959 ATP5L2Q7Z4Y8 100 aa10.55□□□□□ -0.72
TPM1-226ENST00000560959 Q8N8P6 123 aa10.54□□□□□ -0.72
TPM1-226ENST00000560959 MAP1LC3AQ9H492 121 aa10.54□□□□□ -0.72
TPM1-226ENST00000560959 GEMIN7Q9H840 131 aaKnown RBP10.54□□□□□ -0.72
TPM1-226ENST00000560959 LOC389332A0A1B0GUA5 103 aa10.53□□□□□ -0.72
TPM1-226ENST00000560959 KRTAP13-3Q3SY46 172 aa10.53□□□□□ -0.72
TPM1-226ENST00000560959 PLEKHB2Q96CS7 222 aa10.53□□□□□ -0.72
TPM1-226ENST00000560959 PDZD11Q5EBL8 140 aa10.52□□□□□ -0.73
TPM1-226ENST00000560959 SEC61BP60468 96 aaKnown RBP10.51□□□□□ -0.73
TPM1-226ENST00000560959 GNB1LQ9BYB4 327 aa10.51□□□□□ -0.73
TPM1-226ENST00000560959 IGKV2-28A0A075B6P5 120 aa10.5□□□□□ -0.73
TPM1-226ENST00000560959 SMIM1B2RUZ4 78 aa10.5□□□□□ -0.73
TPM1-226ENST00000560959 IGKV2D-28P01615 120 aa10.5□□□□□ -0.73
TPM1-226ENST00000560959 G0S2P27469 103 aa10.5□□□□□ -0.73
TPM1-226ENST00000560959 PRLHP81277 87 aa10.5□□□□□ -0.73
TPM1-226ENST00000560959 C3orf22Q8N5N4 141 aa10.5□□□□□ -0.73
TPM1-226ENST00000560959 COX7B2Q8TF08 81 aa10.5□□□□□ -0.73
TPM1-226ENST00000560959 KRTAP4-1Q9BYQ7 146 aa10.5□□□□□ -0.73
TPM1-226ENST00000560959 FAM19A1Q7Z5A9 133 aa10.49□□□□□ -0.73
TPM1-226ENST00000560959 TIMM17AQ99595 171 aa10.49□□□□□ -0.73
TPM1-226ENST00000560959 SRSF3P84103 164 aaKnown RBP10.48□□□□□ -0.73
TPM1-226ENST00000560959 C4orf48Q5BLP8 95 aa10.48□□□□□ -0.73
TPM1-226ENST00000560959 TMEM126AQ9H061 195 aa10.48□□□□□ -0.73
TPM1-226ENST00000560959 C9JQL5 133 aa10.47□□□□□ -0.73
TPM1-226ENST00000560959 RAB5BP61020 215 aa10.47□□□□□ -0.73
TPM1-226ENST00000560959 IGLV5-45A0A087WSX0 123 aa10.46□□□□□ -0.73
TPM1-226ENST00000560959 TINCRA0A1B0GVN0 87 aa10.46□□□□□ -0.73
TPM1-226ENST00000560959 CBLN2Q8IUK8 224 aa10.46□□□□□ -0.73
TPM1-226ENST00000560959 NXT2Q9NPJ8 142 aaKnown RBP10.45□□□□□ -0.74
TPM1-226ENST00000560959 M0R378 163 aa10.44□□□□□ -0.74
TPM1-226ENST00000560959 SCO1O75880 301 aa10.44□□□□□ -0.74
TPM1-226ENST00000560959 TOMM6Q96B49 74 aa10.44□□□□□ -0.74
TPM1-226ENST00000560959 TMEM238C9JI98 176 aa10.43□□□□□ -0.74
TPM1-226ENST00000560959 VPREB1P12018 145 aa10.43□□□□□ -0.74
TPM1-226ENST00000560959 PEA15Q15121 130 aa10.43□□□□□ -0.74
TPM1-226ENST00000560959 ERASQ7Z444 233 aa10.42□□□□□ -0.74
TPM1-226ENST00000560959 ATP5LO75964 103 aa10.41□□□□□ -0.74
TPM1-226ENST00000560959 SPINK1P00995 79 aa10.41□□□□□ -0.74
TPM1-226ENST00000560959 RPL24P83731 157 aaKnown RBP10.41□□□□□ -0.74
TPM1-226ENST00000560959 SPRR4Q96PI1 79 aa10.41□□□□□ -0.74
TPM1-226ENST00000560959 A0A1B0GVG6 124 aa10.39□□□□□ -0.75
TPM1-226ENST00000560959 AKAP14Q86UN6 197 aa10.39□□□□□ -0.75
TPM1-226ENST00000560959 MRPL18Q9H0U6 180 aaKnown RBP10.39□□□□□ -0.75
TPM1-226ENST00000560959 ZNF706Q9Y5V0 76 aaPredicted RBP10.39□□□□□ -0.75
TPM1-226ENST00000560959 LCE2CQ5TA81 110 aa10.38□□□□□ -0.75
TPM1-226ENST00000560959 SCGB3A1Q96QR1 104 aa10.38□□□□□ -0.75
TPM1-226ENST00000560959 HIGD2AQ9BW72 106 aa10.38□□□□□ -0.75
TPM1-226ENST00000560959 LINC01549A6NIU2 74 aa10.37□□□□□ -0.75
TPM1-226ENST00000560959 SPINK8P0C7L1 97 aa10.37□□□□□ -0.75
TPM1-226ENST00000560959 COX17Q14061 63 aa10.37□□□□□ -0.75
TPM1-226ENST00000560959 Q8NBF4 154 aa10.37□□□□□ -0.75
TPM1-226ENST00000560959 SND1-IT1Q9HBX3 110 aa10.37□□□□□ -0.75
TPM1-226ENST00000560959 PFN2P35080 140 aa10.36□□□□□ -0.75
TPM1-226ENST00000560959 DAND5Q8N907 189 aa10.36□□□□□ -0.75
TPM1-226ENST00000560959 CST9LQ9H4G1 147 aa10.36□□□□□ -0.75
TPM1-226ENST00000560959 NDUFA12Q9UI09 145 aa10.36□□□□□ -0.75
TPM1-226ENST00000560959 H3BRM9 83 aa10.34□□□□□ -0.75
TPM1-226ENST00000560959 RPS29P62273 56 aaKnown RBP10.34□□□□□ -0.75
TPM1-226ENST00000560959 XP32Q5T750 250 aa10.34□□□□□ -0.75
TPM1-226ENST00000560959 CFC1BP0CG36 223 aa10.33□□□□□ -0.76
TPM1-226ENST00000560959 FAM19A2Q8N3H0 131 aa10.33□□□□□ -0.76
TPM1-226ENST00000560959 ADCYAP1P18509 176 aa10.32□□□□□ -0.76
TPM1-226ENST00000560959 ERG28Q9UKR5 140 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms