RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 CST9LQ9H4G1 147 aa6.24□□□□□ -1.41
TPM1-225ENST00000560679 IGLV4-69A0A075B6H9 119 aa6.23□□□□□ -1.41
TPM1-225ENST00000560679 KRTAP9-6A0A140TA67 174 aa6.23□□□□□ -1.41
TPM1-225ENST00000560679 CRPP02741 224 aa6.23□□□□□ -1.41
TPM1-225ENST00000560679 ZNF25P17030 456 aaPredicted RBP6.23□□□□□ -1.41
TPM1-225ENST00000560679 CNBPP62633 177 aaKnown RBP6.23□□□□□ -1.41
TPM1-225ENST00000560679 PRR3P79522 188 aaKnown RBP6.23□□□□□ -1.41
TPM1-225ENST00000560679 C11orf86A6NJI1 115 aa6.22□□□□□ -1.41
TPM1-225ENST00000560679 E9PLD3 99 aa6.22□□□□□ -1.41
TPM1-225ENST00000560679 NPSP0C0P6 89 aa6.22□□□□□ -1.41
TPM1-225ENST00000560679 UBE2D3P61077 147 aa6.22□□□□□ -1.41
TPM1-225ENST00000560679 HERVK_113P61574 105 aa6.22□□□□□ -1.41
TPM1-225ENST00000560679 UBE2D2P62837 147 aa6.22□□□□□ -1.41
TPM1-225ENST00000560679 LINC00469Q8N7U9 141 aa6.22□□□□□ -1.41
TPM1-225ENST00000560679 ORAOV1Q8WV07 137 aa6.22□□□□□ -1.41
TPM1-225ENST00000560679 TTTY13Q9BZ97 58 aa6.22□□□□□ -1.41
TPM1-225ENST00000560679 PLAC8Q9NZF1 115 aa6.22□□□□□ -1.41
TPM1-225ENST00000560679 PYGO1Q9Y3Y4 419 aa6.22□□□□□ -1.41
TPM1-225ENST00000560679 IGLV4-3A0A075B6K6 122 aa6.21□□□□□ -1.42
TPM1-225ENST00000560679 TRBV10-1A0A0K0K1A3 114 aa6.21□□□□□ -1.42
TPM1-225ENST00000560679 TAX1BP3O14907 124 aa6.21□□□□□ -1.42
TPM1-225ENST00000560679 ANGP03950 147 aaKnown RBP6.21□□□□□ -1.42
TPM1-225ENST00000560679 SLPIP03973 132 aa6.21□□□□□ -1.42
TPM1-225ENST00000560679 COTL1Q14019 142 aa6.21□□□□□ -1.42
TPM1-225ENST00000560679 MIAQ16674 131 aa6.21□□□□□ -1.42
TPM1-225ENST00000560679 CLPSL2Q6UWE3 100 aa6.21□□□□□ -1.42
TPM1-225ENST00000560679 SPANXA1Q9NS26 97 aa6.21□□□□□ -1.42
TPM1-225ENST00000560679 TRBV25-1A0A075B6N4 114 aa6.2□□□□□ -1.42
TPM1-225ENST00000560679 TRBV6-8A0A0A6YYG3 113 aa6.2□□□□□ -1.42
TPM1-225ENST00000560679 A6NDN8 102 aa6.2□□□□□ -1.42
TPM1-225ENST00000560679 TMEM262E9PQX1 116 aa6.2□□□□□ -1.42
TPM1-225ENST00000560679 PRR34Q9NV39 138 aa6.2□□□□□ -1.42
TPM1-225ENST00000560679 IGHV3-64A0A075B6Q5 118 aa6.19□□□□□ -1.42
TPM1-225ENST00000560679 MYMXA0A1B0GTQ4 84 aa6.19□□□□□ -1.42
TPM1-225ENST00000560679 RPL36AP83881 106 aaKnown RBP6.19□□□□□ -1.42
TPM1-225ENST00000560679 TAL2Q16559 108 aa6.19□□□□□ -1.42
TPM1-225ENST00000560679 C7orf33Q8WU49 177 aa6.19□□□□□ -1.42
TPM1-225ENST00000560679 RPL36ALQ969Q0 106 aaKnown RBP6.19□□□□□ -1.42
TPM1-225ENST00000560679 AMELXQ99217 191 aa6.19□□□□□ -1.42
TPM1-225ENST00000560679 OPRPNQ99935 248 aaPredicted RBP6.19□□□□□ -1.42
TPM1-225ENST00000560679 VCX2Q9H322 139 aa6.19□□□□□ -1.42
TPM1-225ENST00000560679 TRBV7-3A0A075B6L6 115 aa6.18□□□□□ -1.42
TPM1-225ENST00000560679 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.18□□□□□ -1.42
TPM1-225ENST00000560679 IGKV2-29A2NJV5 120 aaPredicted RBP6.18□□□□□ -1.42
TPM1-225ENST00000560679 TMEM170BQ5T4T1 132 aa6.18□□□□□ -1.42
TPM1-225ENST00000560679 Q6ZVH6 145 aa6.18□□□□□ -1.42
TPM1-225ENST00000560679 TIMM21Q9BVV7 248 aa6.18□□□□□ -1.42
TPM1-225ENST00000560679 UBE2D4Q9Y2X8 147 aa6.18□□□□□ -1.42
TPM1-225ENST00000560679 ZNF815PA8K554 130 aa6.17□□□□□ -1.42
TPM1-225ENST00000560679 H3BRM9 83 aa6.17□□□□□ -1.42
TPM1-225ENST00000560679 ZNF22P17026 224 aaPredicted RBP6.17□□□□□ -1.42
TPM1-225ENST00000560679 MRPS36P82909 103 aaKnown RBP6.17□□□□□ -1.42
TPM1-225ENST00000560679 LINC00269Q8N2A0 174 aa6.17□□□□□ -1.42
TPM1-225ENST00000560679 FAM104AQ969W3 186 aa6.17□□□□□ -1.42
TPM1-225ENST00000560679 IGLV10-54A0A075B6I4 117 aa6.16□□□□□ -1.42
TPM1-225ENST00000560679 TMEM223A0PJW6 202 aa6.16□□□□□ -1.42
TPM1-225ENST00000560679 LEPROTO15243 131 aa6.16□□□□□ -1.42
TPM1-225ENST00000560679 FXYD2P54710 66 aa6.16□□□□□ -1.42
TPM1-225ENST00000560679 RBX1P62877 108 aa6.16□□□□□ -1.42
TPM1-225ENST00000560679 SMAGPQ0VAQ4 97 aa6.16□□□□□ -1.42
TPM1-225ENST00000560679 SPINK6Q6UWN8 80 aa6.16□□□□□ -1.42
TPM1-225ENST00000560679 NTM-AS1Q6ZSK4 140 aa6.16□□□□□ -1.42
TPM1-225ENST00000560679 Q6ZUT4 128 aa6.16□□□□□ -1.42
TPM1-225ENST00000560679 CEND1Q8N111 149 aa6.16□□□□□ -1.42
TPM1-225ENST00000560679 DPH3Q96FX2 82 aa6.16□□□□□ -1.42
TPM1-225ENST00000560679 CHCHD5Q9BSY4 110 aa6.16□□□□□ -1.42
TPM1-225ENST00000560679 TINCRA0A1B0GVN0 87 aa6.15□□□□□ -1.42
TPM1-225ENST00000560679 J3QQQ9 107 aa6.15□□□□□ -1.42
TPM1-225ENST00000560679 TSPEAR-AS2P59090 65 aa6.15□□□□□ -1.42
TPM1-225ENST00000560679 SRSF9Q13242 221 aaKnown RBP eCLIP6.15□□□□□ -1.42
TPM1-225ENST00000560679 REG3GQ6UW15 175 aa6.15□□□□□ -1.42
TPM1-225ENST00000560679 PLEKHB2Q96CS7 222 aa6.15□□□□□ -1.42
TPM1-225ENST00000560679 HIST1H4GQ99525 98 aa6.15□□□□□ -1.42
TPM1-225ENST00000560679 C9orf118A6NHY6 69 aa6.14□□□□□ -1.43
TPM1-225ENST00000560679 SMIM13P0DJ93 91 aa6.14□□□□□ -1.43
TPM1-225ENST00000560679 LGALS3P17931 250 aaKnown RBP6.14□□□□□ -1.43
TPM1-225ENST00000560679 PTTG1IPP53801 180 aa6.14□□□□□ -1.43
TPM1-225ENST00000560679 COX6A2Q02221 97 aa6.14□□□□□ -1.43
TPM1-225ENST00000560679 GAGE6Q13070 117 aa6.14□□□□□ -1.43
TPM1-225ENST00000560679 VAMP3Q15836 100 aa6.14□□□□□ -1.43
TPM1-225ENST00000560679 SCGB1D4Q6XE38 83 aa6.14□□□□□ -1.43
TPM1-225ENST00000560679 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.13□□□□□ -1.43
TPM1-225ENST00000560679 IGKV2-24A0A0C4DH68 120 aa6.13□□□□□ -1.43
TPM1-225ENST00000560679 REG3AQ06141 175 aa6.13□□□□□ -1.43
TPM1-225ENST00000560679 UBE2V1Q13404 147 aa6.13□□□□□ -1.43
TPM1-225ENST00000560679 RNASE13Q5GAN3 156 aaKnown RBP6.13□□□□□ -1.43
TPM1-225ENST00000560679 LCE2AQ5TA79 106 aaPredicted RBP6.13□□□□□ -1.43
TPM1-225ENST00000560679 C15orf56Q8N910 161 aa6.13□□□□□ -1.43
TPM1-225ENST00000560679 OR5A1Q8NGJ0 315 aa6.13□□□□□ -1.43
TPM1-225ENST00000560679 TMEM243Q9BU79 118 aa6.13□□□□□ -1.43
TPM1-225ENST00000560679 UBE2D1P51668 147 aa6.12□□□□□ -1.43
TPM1-225ENST00000560679 SPANXB1Q9NS25 103 aaPredicted RBP6.12□□□□□ -1.43
TPM1-225ENST00000560679 NHP2Q9NX24 153 aaKnown RBP6.12□□□□□ -1.43
TPM1-225ENST00000560679 CSDC2Q9Y534 153 aaKnown RBP6.12□□□□□ -1.43
TPM1-225ENST00000560679 IGLV5-45A0A087WSX0 123 aa6.11□□□□□ -1.43
TPM1-225ENST00000560679 A0A096LNI7 61 aa6.11□□□□□ -1.43
TPM1-225ENST00000560679 TMEM238LA0A1B0GVL6 79 aa6.11□□□□□ -1.43
TPM1-225ENST00000560679 A0A1B0GWB2 263 aa6.11□□□□□ -1.43
TPM1-225ENST00000560679 A6NJY4 79 aa6.11□□□□□ -1.43
TPM1-225ENST00000560679 H7C423 109 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms