RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 SERP2Q8N6R1 65 aa6.14□□□□□ -1.43
CCDC33-209ENST00000560565 ZNF625Q96I27 306 aaPredicted RBP6.14□□□□□ -1.43
CCDC33-209ENST00000560565 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.13□□□□□ -1.43
CCDC33-209ENST00000560565 hADV29S1A0JD25 119 aa6.13□□□□□ -1.43
CCDC33-209ENST00000560565 IGKV2-29A2NJV5 120 aaPredicted RBP6.13□□□□□ -1.43
CCDC33-209ENST00000560565 SMIM1B2RUZ4 78 aa6.13□□□□□ -1.43
CCDC33-209ENST00000560565 CCL24O00175 119 aa6.13□□□□□ -1.43
CCDC33-209ENST00000560565 NDUFC2O95298 119 aa6.13□□□□□ -1.43
CCDC33-209ENST00000560565 IGKV3-20P01619 116 aa6.13□□□□□ -1.43
CCDC33-209ENST00000560565 DEFB1P60022 68 aa6.13□□□□□ -1.43
CCDC33-209ENST00000560565 LINC00242Q5T6M2 205 aa6.13□□□□□ -1.43
CCDC33-209ENST00000560565 MUC7Q8TAX7 377 aa6.13□□□□□ -1.43
CCDC33-209ENST00000560565 K7EQD1 137 aa6.12□□□□□ -1.43
CCDC33-209ENST00000560565 SLURP1P55000 103 aa6.12□□□□□ -1.43
CCDC33-209ENST00000560565 LINC01561Q8N1V8 128 aa6.12□□□□□ -1.43
CCDC33-209ENST00000560565 OBSCN-AS1Q96MR7 158 aa6.12□□□□□ -1.43
CCDC33-209ENST00000560565 TMEM243Q9BU79 118 aa6.12□□□□□ -1.43
CCDC33-209ENST00000560565 DNAH3Q8TD57 4116 aa6.11□□□□□ -1.43
CCDC33-209ENST00000560565 NPC2P61916 151 aa6.11□□□□□ -1.43
CCDC33-209ENST00000560565 DEFB136Q30KP8 78 aa6.11□□□□□ -1.43
CCDC33-209ENST00000560565 C18orf65Q6ZTR6 163 aa6.11□□□□□ -1.43
CCDC33-209ENST00000560565 COX7B2Q8TF08 81 aa6.11□□□□□ -1.43
CCDC33-209ENST00000560565 DYNLRB2Q8TF09 96 aa6.11□□□□□ -1.43
CCDC33-209ENST00000560565 FAM104AQ969W3 186 aa6.11□□□□□ -1.43
CCDC33-209ENST00000560565 SND1-IT1Q9HBX3 110 aa6.11□□□□□ -1.43
CCDC33-209ENST00000560565 ORMDL1Q9P0S3 153 aa6.11□□□□□ -1.43
CCDC33-209ENST00000560565 IGHV3OR16-12A0A075B7B8 117 aa6.1□□□□□ -1.43
CCDC33-209ENST00000560565 TMEM256-PLSCR3K7ERE1 68 aa6.1□□□□□ -1.43
CCDC33-209ENST00000560565 DEFB131AP59861 70 aa6.1□□□□□ -1.43
CCDC33-209ENST00000560565 WFDC9Q8NEX5 89 aa6.1□□□□□ -1.43
CCDC33-209ENST00000560565 CDC42SE2Q9NRR3 84 aa6.1□□□□□ -1.43
CCDC33-209ENST00000560565 KLK5Q9Y337 293 aaPredicted RBP6.1□□□□□ -1.43
CCDC33-209ENST00000560565 IGHV3-73A0A0B4J1V6 119 aa6.09□□□□□ -1.43
CCDC33-209ENST00000560565 SMIM9A6NGZ8 99 aa6.09□□□□□ -1.43
CCDC33-209ENST00000560565 LINC00694P0DN24 101 aa6.09□□□□□ -1.43
CCDC33-209ENST00000560565 PDE6GP18545 87 aa6.09□□□□□ -1.43
CCDC33-209ENST00000560565 OXLD1Q5BKU9 147 aa6.09□□□□□ -1.43
CCDC33-209ENST00000560565 CEMP1Q6PRD7 247 aaPredicted RBP6.09□□□□□ -1.43
CCDC33-209ENST00000560565 C11orf72Q8NBR9 251 aa6.09□□□□□ -1.43
CCDC33-209ENST00000560565 HTN1P15515 57 aa6.08□□□□□ -1.44
CCDC33-209ENST00000560565 DEFB114Q30KQ6 69 aa6.08□□□□□ -1.44
CCDC33-209ENST00000560565 UBL5Q9BZL1 73 aa6.08□□□□□ -1.44
CCDC33-209ENST00000560565 TRAV13-1A0A0B4J241 112 aa6.07□□□□□ -1.44
CCDC33-209ENST00000560565 TRBV6-4A0A1B0GX49 114 aa6.07□□□□□ -1.44
CCDC33-209ENST00000560565 F5H768 121 aa6.07□□□□□ -1.44
CCDC33-209ENST00000560565 CCKP06307 115 aa6.07□□□□□ -1.44
CCDC33-209ENST00000560565 LINC00158P58513 81 aa6.07□□□□□ -1.44
CCDC33-209ENST00000560565 RNASE13Q5GAN3 156 aaKnown RBP6.07□□□□□ -1.44
CCDC33-209ENST00000560565 KPRPQ5T749 579 aaPredicted RBP6.07□□□□□ -1.44
CCDC33-209ENST00000560565 STHQ8IWL8 128 aa6.07□□□□□ -1.44
CCDC33-209ENST00000560565 SMCR5Q8TEV8 140 aa6.07□□□□□ -1.44
CCDC33-209ENST00000560565 DEFB104AQ8WTQ1 72 aa6.07□□□□□ -1.44
CCDC33-209ENST00000560565 C16orf74Q96GX8 76 aa6.07□□□□□ -1.44
CCDC33-209ENST00000560565 C2orf48Q96LS8 159 aa6.07□□□□□ -1.44
CCDC33-209ENST00000560565 KNCNA6PVL3 124 aa6.06□□□□□ -1.44
CCDC33-209ENST00000560565 EDN2P20800 178 aa6.06□□□□□ -1.44
CCDC33-209ENST00000560565 ATP5EP56381 51 aaPredicted RBP6.06□□□□□ -1.44
CCDC33-209ENST00000560565 COX17Q14061 63 aa6.06□□□□□ -1.44
CCDC33-209ENST00000560565 MIR7-3HGQ8N6C7 128 aa6.06□□□□□ -1.44
CCDC33-209ENST00000560565 LINC00482Q8N8I6 264 aa6.06□□□□□ -1.44
CCDC33-209ENST00000560565 IL17DQ8TAD2 202 aa6.06□□□□□ -1.44
CCDC33-209ENST00000560565 MAP6D1Q9H9H5 199 aa6.06□□□□□ -1.44
CCDC33-209ENST00000560565 TRGV1A0A0A0MS02 117 aa6.05□□□□□ -1.44
CCDC33-209ENST00000560565 USP17L23D6RBM5 183 aa6.05□□□□□ -1.44
CCDC33-209ENST00000560565 NDUFC1O43677 76 aa6.05□□□□□ -1.44
CCDC33-209ENST00000560565 IGLV1-51P01701 117 aa6.05□□□□□ -1.44
CCDC33-209ENST00000560565 PRB2P02812 416 aaPredicted RBP6.05□□□□□ -1.44
CCDC33-209ENST00000560565 FAM19A5Q7Z5A7 132 aaPredicted RBP6.05□□□□□ -1.44
CCDC33-209ENST00000560565 MRAPQ8TCY5 172 aa6.05□□□□□ -1.44
CCDC33-209ENST00000560565 COL7A1Q02388 2944 aa6.05□□□□□ -1.44
CCDC33-209ENST00000560565 A0A087WZ39 114 aa6.04□□□□□ -1.44
CCDC33-209ENST00000560565 IGHV3-38A0A0C4DH36 116 aa6.04□□□□□ -1.44
CCDC33-209ENST00000560565 A8MZ25 164 aa6.04□□□□□ -1.44
CCDC33-209ENST00000560565 PAX4O43316 350 aa6.04□□□□□ -1.44
CCDC33-209ENST00000560565 COX6A2Q02221 97 aa6.04□□□□□ -1.44
CCDC33-209ENST00000560565 RBMY1FQ15415 496 aaKnown RBP6.04□□□□□ -1.44
CCDC33-209ENST00000560565 SOSTDC1Q6X4U4 206 aa6.04□□□□□ -1.44
CCDC33-209ENST00000560565 SMIM11BQ8TCY0 68 aa6.04□□□□□ -1.44
CCDC33-209ENST00000560565 LINC00167Q96N53 147 aa6.04□□□□□ -1.44
CCDC33-209ENST00000560565 LOC107984640A0A0U1RRK4 108 aa6.03□□□□□ -1.44
CCDC33-209ENST00000560565 SS18Q15532 418 aa6.03□□□□□ -1.44
CCDC33-209ENST00000560565 C9orf66Q5T8R8 295 aa6.03□□□□□ -1.44
CCDC33-209ENST00000560565 MUC4Q99102 2169 aa6.02□□□□□ -1.45
CCDC33-209ENST00000560565 LECT2O14960 151 aa6.02□□□□□ -1.45
CCDC33-209ENST00000560565 Q6ZSN1 163 aa6.02□□□□□ -1.45
CCDC33-209ENST00000560565 Q8IZM0 81 aa6.02□□□□□ -1.45
CCDC33-209ENST00000560565 DPH3Q96FX2 82 aa6.02□□□□□ -1.45
CCDC33-209ENST00000560565 FAM218AQ96MZ4 157 aa6.02□□□□□ -1.45
CCDC33-209ENST00000560565 C14orf132Q9NPU4 83 aa6.02□□□□□ -1.45
CCDC33-209ENST00000560565 TRGV2A0A075B6R0 118 aa6.01□□□□□ -1.45
CCDC33-209ENST00000560565 A0A0U1RRA0 63 aa6.01□□□□□ -1.45
CCDC33-209ENST00000560565 CCL18P55774 89 aa6.01□□□□□ -1.45
CCDC33-209ENST00000560565 KRTAP10-11P60412 298 aa6.01□□□□□ -1.45
CCDC33-209ENST00000560565 EGFEM1PQ0D2K5 195 aa6.01□□□□□ -1.45
CCDC33-209ENST00000560565 C6orf226Q5I0X4 101 aa6.01□□□□□ -1.45
CCDC33-209ENST00000560565 LYPD5Q6UWN5 251 aa6.01□□□□□ -1.45
CCDC33-209ENST00000560565 LINC00337Q8N6G1 96 aa6.01□□□□□ -1.45
CCDC33-209ENST00000560565 Q9HAA7 133 aa6.01□□□□□ -1.45
CCDC33-209ENST00000560565 DNAH9Q9NYC9 4486 aa6□□□□□ -1.45
CCDC33-209ENST00000560565 IGKV2-28A0A075B6P5 120 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms