RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CRIP2P52943 208 aaPredicted RBP9.75□□□□□ -0.85
TRAF3-208ENST00000560371 CIRBP-AS1Q8TBR5 109 aa9.75□□□□□ -0.85
TRAF3-208ENST00000560371 Q8IZM0 81 aa9.75□□□□□ -0.85
TRAF3-208ENST00000560371 Q6ZQY7 126 aa9.74□□□□□ -0.85
TRAF3-208ENST00000560371 CNFNQ9BYD5 112 aa9.74□□□□□ -0.85
TRAF3-208ENST00000560371 Q8N9L7 120 aa9.74□□□□□ -0.85
TRAF3-208ENST00000560371 CFAP46Q8IYW2 2715 aa9.74□□□□□ -0.85
TRAF3-208ENST00000560371 TRBV30A0A0K0K1B3 111 aa9.73□□□□□ -0.85
TRAF3-208ENST00000560371 FAM240AA0A1B0GVK7 77 aa9.73□□□□□ -0.85
TRAF3-208ENST00000560371 G3V4G9 280 aa9.73□□□□□ -0.85
TRAF3-208ENST00000560371 CHCHD7Q9BUK0 85 aa9.73□□□□□ -0.85
TRAF3-208ENST00000560371 AKAP13Q12802 2813 aa9.73□□□□□ -0.85
TRAF3-208ENST00000560371 NDUFV3P56181 108 aaKnown RBP9.73□□□□□ -0.85
TRAF3-208ENST00000560371 MUC7Q8TAX7 377 aa9.73□□□□□ -0.85
TRAF3-208ENST00000560371 SNURFQ9Y675 71 aa9.72□□□□□ -0.85
TRAF3-208ENST00000560371 IGLV5-52A0A0A0MRZ9 124 aa9.72□□□□□ -0.85
TRAF3-208ENST00000560371 FAM30AQ9NZY2 134 aa9.71□□□□□ -0.85
TRAF3-208ENST00000560371 NDUFC2-KCTD14E9PQ53 114 aa9.71□□□□□ -0.86
TRAF3-208ENST00000560371 SMIM11BQ8TCY0 68 aa9.71□□□□□ -0.86
TRAF3-208ENST00000560371 ZNF580Q9UK33 172 aa9.71□□□□□ -0.86
TRAF3-208ENST00000560371 M0QXV9 152 aa9.7□□□□□ -0.86
TRAF3-208ENST00000560371 GAS8-AS1O95177 125 aa9.7□□□□□ -0.86
TRAF3-208ENST00000560371 RPL28P46779 137 aaKnown RBP9.7□□□□□ -0.86
TRAF3-208ENST00000560371 HELZ2Q9BYK8 2649 aaKnown RBP9.69□□□□□ -0.86
TRAF3-208ENST00000560371 UNQ6190/PRO20217Q6UXQ8 127 aa9.69□□□□□ -0.86
TRAF3-208ENST00000560371 ZNF73O43830 326 aaPredicted RBP9.69□□□□□ -0.86
TRAF3-208ENST00000560371 NHLRC4P0CG21 123 aaPredicted RBP9.69□□□□□ -0.86
TRAF3-208ENST00000560371 POM121L12Q8N7R1 296 aa9.69□□□□□ -0.86
TRAF3-208ENST00000560371 RNASE8Q8TDE3 154 aaKnown RBP9.69□□□□□ -0.86
TRAF3-208ENST00000560371 MRPS12O15235 138 aaKnown RBP9.69□□□□□ -0.86
TRAF3-208ENST00000560371 SPINK1P00995 79 aa9.68□□□□□ -0.86
TRAF3-208ENST00000560371 ATP5EP2Q5VTU8 51 aa9.68□□□□□ -0.86
TRAF3-208ENST00000560371 FHL2Q14192 279 aa9.67□□□□□ -0.86
TRAF3-208ENST00000560371 C10orf25Q5T742 122 aa9.67□□□□□ -0.86
TRAF3-208ENST00000560371 C6orf223Q8N319 242 aa9.67□□□□□ -0.86
TRAF3-208ENST00000560371 EGFEM1PQ0D2K5 195 aa9.67□□□□□ -0.86
TRAF3-208ENST00000560371 TP73-AS1Q9UF72 201 aa9.67□□□□□ -0.86
TRAF3-208ENST00000560371 LINC00242Q5T6M2 205 aa9.66□□□□□ -0.86
TRAF3-208ENST00000560371 IGIPA6NJ69 53 aa9.66□□□□□ -0.86
TRAF3-208ENST00000560371 C1orf134Q5TEV5 83 aa9.65□□□□□ -0.86
TRAF3-208ENST00000560371 C9orf116Q5BN46 136 aaPredicted RBP9.65□□□□□ -0.86
TRAF3-208ENST00000560371 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.64□□□□□ -0.87
TRAF3-208ENST00000560371 IGLV4-60A0A075B6I1 120 aa9.64□□□□□ -0.87
TRAF3-208ENST00000560371 FSHBP01225 129 aa9.64□□□□□ -0.87
TRAF3-208ENST00000560371 V9GYY9 64 aa9.63□□□□□ -0.87
TRAF3-208ENST00000560371 ESRGQ1W209 222 aa9.63□□□□□ -0.87
TRAF3-208ENST00000560371 REG3GQ6UW15 175 aa9.63□□□□□ -0.87
TRAF3-208ENST00000560371 ITPR3Q14573 2671 aa9.62□□□□□ -0.87
TRAF3-208ENST00000560371 COX6A2Q02221 97 aa9.61□□□□□ -0.87
TRAF3-208ENST00000560371 LINC00694P0DN24 101 aa9.61□□□□□ -0.87
TRAF3-208ENST00000560371 CSDC2Q9Y534 153 aaKnown RBP9.61□□□□□ -0.87
TRAF3-208ENST00000560371 FLNAP21333 2647 aaKnown RBP9.61□□□□□ -0.87
TRAF3-208ENST00000560371 YPEL4Q96NS1 127 aa9.61□□□□□ -0.87
TRAF3-208ENST00000560371 LST1O00453 97 aa9.61□□□□□ -0.87
TRAF3-208ENST00000560371 FHL3Q13643 280 aa9.61□□□□□ -0.87
TRAF3-208ENST00000560371 SMIM1B2RUZ4 78 aa9.6□□□□□ -0.87
TRAF3-208ENST00000560371 LINC01556Q5JQF7 62 aa9.6□□□□□ -0.87
TRAF3-208ENST00000560371 LYPD5Q6UWN5 251 aa9.6□□□□□ -0.87
TRAF3-208ENST00000560371 A0A1B0GUV1 79 aa9.59□□□□□ -0.87
TRAF3-208ENST00000560371 Q6Q795 121 aa9.59□□□□□ -0.87
TRAF3-208ENST00000560371 BEAN1Q3B7T3 259 aa9.59□□□□□ -0.87
TRAF3-208ENST00000560371 TRBV10-3A0A0K0K1G6 114 aa9.58□□□□□ -0.88
TRAF3-208ENST00000560371 COL4A2P08572 1712 aa9.58□□□□□ -0.88
TRAF3-208ENST00000560371 FAM19A3Q7Z5A8 133 aa9.58□□□□□ -0.88
TRAF3-208ENST00000560371 C2orf91Q6ZV80 131 aa9.58□□□□□ -0.88
TRAF3-208ENST00000560371 IGHV6-1A0A0B4J1U7 121 aa9.57□□□□□ -0.88
TRAF3-208ENST00000560371 TRBV7-6A0A0J9YX20 115 aa9.57□□□□□ -0.88
TRAF3-208ENST00000560371 PRR3P79522 188 aaKnown RBP9.57□□□□□ -0.88
TRAF3-208ENST00000560371 C1orf137Q5JT78 98 aa9.57□□□□□ -0.88
TRAF3-208ENST00000560371 UQCRQO14949 82 aa9.57□□□□□ -0.88
TRAF3-208ENST00000560371 LAMA2P24043 3122 aaKnown RBP9.56□□□□□ -0.88
TRAF3-208ENST00000560371 CELA1Q9UNI1 258 aa9.56□□□□□ -0.88
TRAF3-208ENST00000560371 MT-ATP8P03928 68 aa9.56□□□□□ -0.88
TRAF3-208ENST00000560371 F8WDY8 70 aa9.55□□□□□ -0.88
TRAF3-208ENST00000560371 COX8CQ7Z4L0 72 aa9.54□□□□□ -0.88
TRAF3-208ENST00000560371 Q6ZSN1 163 aa9.54□□□□□ -0.88
TRAF3-208ENST00000560371 CFAP54Q96N23 3096 aa9.54□□□□□ -0.88
TRAF3-208ENST00000560371 NTM-AS1Q6ZSK4 140 aa9.54□□□□□ -0.88
TRAF3-208ENST00000560371 Q8N2B8 174 aa9.54□□□□□ -0.88
TRAF3-208ENST00000560371 LINC00337Q8N6G1 96 aa9.54□□□□□ -0.88
TRAF3-208ENST00000560371 Q8N814 137 aa9.53□□□□□ -0.88
TRAF3-208ENST00000560371 C2orf48Q96LS8 159 aa9.52□□□□□ -0.88
TRAF3-208ENST00000560371 AMELXQ99217 191 aa9.52□□□□□ -0.89
TRAF3-208ENST00000560371 NDUFC1O43677 76 aa9.52□□□□□ -0.89
TRAF3-208ENST00000560371 PCOTHQ58A44 107 aa9.51□□□□□ -0.89
TRAF3-208ENST00000560371 IMUPQ9GZP8 106 aa9.5□□□□□ -0.89
TRAF3-208ENST00000560371 PMAIP1Q13794 54 aa9.49□□□□□ -0.89
TRAF3-208ENST00000560371 MDFIQ99750 246 aa9.49□□□□□ -0.89
TRAF3-208ENST00000560371 FLG2Q5D862 2391 aaPredicted RBP9.49□□□□□ -0.89
TRAF3-208ENST00000560371 LINC00208Q96KT6 92 aa9.49□□□□□ -0.89
TRAF3-208ENST00000560371 Q9BRP9 147 aa9.49□□□□□ -0.89
TRAF3-208ENST00000560371 A0A0C4DFX4 3053 aa9.48□□□□□ -0.89
TRAF3-208ENST00000560371 SBSPONQ8IVN8 264 aa9.48□□□□□ -0.89
TRAF3-208ENST00000560371 PRLHP81277 87 aa9.48□□□□□ -0.89
TRAF3-208ENST00000560371 Q6JHZ5 121 aa9.48□□□□□ -0.89
TRAF3-208ENST00000560371 CHD7Q9P2D1 2997 aa9.47□□□□□ -0.89
TRAF3-208ENST00000560371 ATP5EP56381 51 aaPredicted RBP9.47□□□□□ -0.89
TRAF3-208ENST00000560371 RANBP2P49792 3224 aaKnown RBP9.47□□□□□ -0.89
TRAF3-208ENST00000560371 DEFB116Q30KQ4 102 aa9.47□□□□□ -0.89
TRAF3-208ENST00000560371 SERTAD4-AS1Q5TG53 156 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms