RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 C14orf144Q96I85 54 aa4.32□□□□□ -1.72
SPG11-221ENST00000560299 DNAH10Q8IVF4 4471 aa4.32□□□□□ -1.72
SPG11-221ENST00000560299 DNAH2Q9P225 4427 aa4.31□□□□□ -1.72
SPG11-221ENST00000560299 KMT2AQ03164 3969 aa4.31□□□□□ -1.72
SPG11-221ENST00000560299 IGHV3-64A0A075B6Q5 118 aa4.31□□□□□ -1.72
SPG11-221ENST00000560299 IGLV5-39A0A0G2JS06 123 aa4.31□□□□□ -1.72
SPG11-221ENST00000560299 MYMXA0A1B0GTQ4 84 aa4.31□□□□□ -1.72
SPG11-221ENST00000560299 ZNF815PA8K554 130 aa4.31□□□□□ -1.72
SPG11-221ENST00000560299 LINC00587B1AMM8 73 aa4.31□□□□□ -1.72
SPG11-221ENST00000560299 PSCAO43653 123 aa4.31□□□□□ -1.72
SPG11-221ENST00000560299 CXCL5P42830 114 aa4.31□□□□□ -1.72
SPG11-221ENST00000560299 Q8IZM0 81 aa4.31□□□□□ -1.72
SPG11-221ENST00000560299 COX7B2Q8TF08 81 aa4.31□□□□□ -1.72
SPG11-221ENST00000560299 MIEN1Q9BRT3 115 aa4.31□□□□□ -1.72
SPG11-221ENST00000560299 PRO1933Q9H354 126 aa4.31□□□□□ -1.72
SPG11-221ENST00000560299 TOMM7Q9P0U1 55 aa4.31□□□□□ -1.72
SPG11-221ENST00000560299 NDUFA12Q9UI09 145 aa4.31□□□□□ -1.72
SPG11-221ENST00000560299 IGKV2D-26A0A0A0MRZ7 120 aa4.3□□□□□ -1.72
SPG11-221ENST00000560299 F8WDY8 70 aa4.3□□□□□ -1.72
SPG11-221ENST00000560299 ZNF561-AS1K7EIQ3 104 aa4.3□□□□□ -1.72
SPG11-221ENST00000560299 CKS1BP61024 79 aa4.3□□□□□ -1.72
SPG11-221ENST00000560299 HERV-K104P63124 156 aa4.3□□□□□ -1.72
SPG11-221ENST00000560299 CIRBPQ14011 172 aaKnown RBP4.3□□□□□ -1.72
SPG11-221ENST00000560299 SCGB1D4Q6XE38 83 aa4.3□□□□□ -1.72
SPG11-221ENST00000560299 BOD1L2Q8IYS8 172 aa4.3□□□□□ -1.72
SPG11-221ENST00000560299 ORAOV1Q8WV07 137 aa4.3□□□□□ -1.72
SPG11-221ENST00000560299 DNAH17Q9UFH2 4485 aa4.3□□□□□ -1.72
SPG11-221ENST00000560299 A6NJY4 79 aa4.29□□□□□ -1.72
SPG11-221ENST00000560299 NDUFA1O15239 70 aa4.29□□□□□ -1.72
SPG11-221ENST00000560299 HNRNPA3P51991 378 aaKnown RBP4.29□□□□□ -1.72
SPG11-221ENST00000560299 SPAG11BQ08648 103 aa4.29□□□□□ -1.72
SPG11-221ENST00000560299 C14orf177Q52M58 125 aa4.29□□□□□ -1.72
SPG11-221ENST00000560299 KRTAP26-1Q6PEX3 210 aa4.29□□□□□ -1.72
SPG11-221ENST00000560299 Q6ZR54 194 aa4.29□□□□□ -1.72
SPG11-221ENST00000560299 LINC00336Q6ZUF6 198 aa4.29□□□□□ -1.72
SPG11-221ENST00000560299 PCP2Q8IVA1 136 aa4.29□□□□□ -1.72
SPG11-221ENST00000560299 FAT2Q9NYQ8 4349 aa4.28□□□□□ -1.72
SPG11-221ENST00000560299 TMEM238C9JI98 176 aa4.28□□□□□ -1.72
SPG11-221ENST00000560299 M0R2N4 97 aa4.28□□□□□ -1.72
SPG11-221ENST00000560299 GCSHP23434 173 aa4.28□□□□□ -1.72
SPG11-221ENST00000560299 DDTP30046 118 aa4.28□□□□□ -1.72
SPG11-221ENST00000560299 MAPKAPK5-AS1Q8N8E1 139 aa4.28□□□□□ -1.72
SPG11-221ENST00000560299 COPS9Q8WXC6 57 aa4.28□□□□□ -1.72
SPG11-221ENST00000560299 HIGD1BQ9P298 99 aa4.28□□□□□ -1.72
SPG11-221ENST00000560299 PCP4L1A6NKN8 68 aa4.27□□□□□ -1.73
SPG11-221ENST00000560299 TSPEAR-AS2P59090 65 aa4.27□□□□□ -1.73
SPG11-221ENST00000560299 SRSF9Q13242 221 aaKnown RBP eCLIP4.27□□□□□ -1.73
SPG11-221ENST00000560299 MEIG1Q5JSS6 88 aa4.27□□□□□ -1.73
SPG11-221ENST00000560299 C1orf134Q5TEV5 83 aa4.27□□□□□ -1.73
SPG11-221ENST00000560299 C6orf223Q8N319 242 aa4.27□□□□□ -1.73
SPG11-221ENST00000560299 SVIPQ8NHG7 77 aa4.27□□□□□ -1.73
SPG11-221ENST00000560299 C2orf48Q96LS8 159 aa4.27□□□□□ -1.73
SPG11-221ENST00000560299 CAMK2N2Q96S95 79 aa4.27□□□□□ -1.73
SPG11-221ENST00000560299 KRTAP1-5Q9BYS1 174 aa4.27□□□□□ -1.73
SPG11-221ENST00000560299 EPPK1P58107 5090 aaKnown RBP4.26□□□□□ -1.73
SPG11-221ENST00000560299 GVQW2A0A096LPI5 108 aaPredicted RBP4.26□□□□□ -1.73
SPG11-221ENST00000560299 A0A0J9YXY3 114 aa4.26□□□□□ -1.73
SPG11-221ENST00000560299 USP17L23D6RBM5 183 aa4.26□□□□□ -1.73
SPG11-221ENST00000560299 TIMM17BO60830 172 aa4.26□□□□□ -1.73
SPG11-221ENST00000560299 COX17Q14061 63 aa4.26□□□□□ -1.73
SPG11-221ENST00000560299 KIAA0087Q14695 138 aa4.26□□□□□ -1.73
SPG11-221ENST00000560299 HIGD2BQ4VC39 106 aa4.26□□□□□ -1.73
SPG11-221ENST00000560299 Q6ZVH6 145 aa4.26□□□□□ -1.73
SPG11-221ENST00000560299 NTN5Q8WTR8 489 aaPredicted RBP4.26□□□□□ -1.73
SPG11-221ENST00000560299 ZNF625Q96I27 306 aaPredicted RBP4.26□□□□□ -1.73
SPG11-221ENST00000560299 HIST1H4GQ99525 98 aa4.26□□□□□ -1.73
SPG11-221ENST00000560299 TTTY13Q9BZ97 58 aa4.26□□□□□ -1.73
SPG11-221ENST00000560299 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.25□□□□□ -1.73
SPG11-221ENST00000560299 TRBV30A0A0K0K1B3 111 aa4.25□□□□□ -1.73
SPG11-221ENST00000560299 M0R143 59 aa4.25□□□□□ -1.73
SPG11-221ENST00000560299 EREGO14944 169 aa4.25□□□□□ -1.73
SPG11-221ENST00000560299 LINC00158P58513 81 aa4.25□□□□□ -1.73
SPG11-221ENST00000560299 SYCNQ0VAF6 134 aa4.25□□□□□ -1.73
SPG11-221ENST00000560299 TAL2Q16559 108 aa4.25□□□□□ -1.73
SPG11-221ENST00000560299 C2orf82Q6UX34 121 aa4.25□□□□□ -1.73
SPG11-221ENST00000560299 C15orf56Q8N910 161 aa4.25□□□□□ -1.73
SPG11-221ENST00000560299 SPANXB1Q9NS25 103 aaPredicted RBP4.25□□□□□ -1.73
SPG11-221ENST00000560299 HECTD4Q9Y4D8 3996 aa4.24□□□□□ -1.73
SPG11-221ENST00000560299 TMEM238LA0A1B0GVL6 79 aa4.24□□□□□ -1.73
SPG11-221ENST00000560299 IFITM1P13164 125 aa4.24□□□□□ -1.73
SPG11-221ENST00000560299 CTAG1AP78358 180 aa4.24□□□□□ -1.73
SPG11-221ENST00000560299 HSD52Q0P140 79 aa4.24□□□□□ -1.73
SPG11-221ENST00000560299 RNF151Q2KHN1 245 aa4.24□□□□□ -1.73
SPG11-221ENST00000560299 UNQ6190/PRO20217Q6UXQ8 127 aa4.24□□□□□ -1.73
SPG11-221ENST00000560299 C2orf91Q6ZV80 131 aa4.24□□□□□ -1.73
SPG11-221ENST00000560299 ERG28Q9UKR5 140 aa4.24□□□□□ -1.73
SPG11-221ENST00000560299 PKIGQ9Y2B9 76 aa4.24□□□□□ -1.73
SPG11-221ENST00000560299 PKD1P98161 4303 aa4.23□□□□□ -1.73
SPG11-221ENST00000560299 LECT2O14960 151 aa4.23□□□□□ -1.73
SPG11-221ENST00000560299 SMIM13P0DJ93 91 aa4.23□□□□□ -1.73
SPG11-221ENST00000560299 PFN2P35080 140 aa4.23□□□□□ -1.73
SPG11-221ENST00000560299 PTTG1IPP53801 180 aa4.23□□□□□ -1.73
SPG11-221ENST00000560299 RPL24P83731 157 aaKnown RBP4.23□□□□□ -1.73
SPG11-221ENST00000560299 LINC00526Q96FQ7 95 aa4.23□□□□□ -1.73
SPG11-221ENST00000560299 CARD19Q96LW7 228 aa4.23□□□□□ -1.73
SPG11-221ENST00000560299 SPANXDQ9BXN6 97 aa4.23□□□□□ -1.73
SPG11-221ENST00000560299 SPANXCQ9NY87 97 aa4.23□□□□□ -1.73
SPG11-221ENST00000560299 TP73-AS1Q9UF72 201 aa4.23□□□□□ -1.73
SPG11-221ENST00000560299 DNAH11Q96DT5 4516 aa4.23□□□□□ -1.73
SPG11-221ENST00000560299 FRAS1Q86XX4 4008 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms