RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 TOMM7Q9P0U1 55 aa5.6□□□□□ -1.51
SMAD3-212ENST00000559937 IGKV3OR2-268A0A0C4DH90 116 aa5.59□□□□□ -1.51
SMAD3-212ENST00000559937 TRACP01848 142 aa5.59□□□□□ -1.51
SMAD3-212ENST00000559937 CRPP02741 224 aa5.59□□□□□ -1.51
SMAD3-212ENST00000559937 MRPL23Q16540 153 aaKnown RBP5.59□□□□□ -1.51
SMAD3-212ENST00000559937 C21orf62-AS1Q17RA5 79 aa5.59□□□□□ -1.51
SMAD3-212ENST00000559937 MIR7-3HGQ8N6C7 128 aa5.59□□□□□ -1.51
SMAD3-212ENST00000559937 UBE2WQ96B02 151 aa5.59□□□□□ -1.51
SMAD3-212ENST00000559937 A0A0U1RRA0 63 aa5.58□□□□□ -1.52
SMAD3-212ENST00000559937 IGHV4-30-4P0DP06 118 aa5.58□□□□□ -1.52
SMAD3-212ENST00000559937 RPL28P46779 137 aaKnown RBP5.58□□□□□ -1.52
SMAD3-212ENST00000559937 LINC00158P58513 81 aa5.58□□□□□ -1.52
SMAD3-212ENST00000559937 C6orf226Q5I0X4 101 aa5.58□□□□□ -1.52
SMAD3-212ENST00000559937 LELP1Q5T871 98 aa5.58□□□□□ -1.52
SMAD3-212ENST00000559937 CD164L2Q6UWJ8 174 aa5.58□□□□□ -1.52
SMAD3-212ENST00000559937 C2orf82Q6UX34 121 aa5.58□□□□□ -1.52
SMAD3-212ENST00000559937 C5orf38Q86SI9 138 aa5.58□□□□□ -1.52
SMAD3-212ENST00000559937 NTN5Q8WTR8 489 aaPredicted RBP5.58□□□□□ -1.52
SMAD3-212ENST00000559937 CLEC2BQ92478 149 aa5.58□□□□□ -1.52
SMAD3-212ENST00000559937 CDIP1Q9H305 208 aa5.58□□□□□ -1.52
SMAD3-212ENST00000559937 SND1-IT1Q9HBX3 110 aa5.58□□□□□ -1.52
SMAD3-212ENST00000559937 H3BNG1 76 aa5.57□□□□□ -1.52
SMAD3-212ENST00000559937 DEFB121Q5J5C9 76 aa5.57□□□□□ -1.52
SMAD3-212ENST00000559937 MUC7Q8TAX7 377 aa5.57□□□□□ -1.52
SMAD3-212ENST00000559937 CELA1Q9UNI1 258 aa5.57□□□□□ -1.52
SMAD3-212ENST00000559937 PKD1L1Q8TDX9 2849 aa5.57□□□□□ -1.52
SMAD3-212ENST00000559937 VWFP04275 2813 aa5.56□□□□□ -1.52
SMAD3-212ENST00000559937 XCL1P47992 114 aa5.56□□□□□ -1.52
SMAD3-212ENST00000559937 CCL18P55774 89 aa5.56□□□□□ -1.52
SMAD3-212ENST00000559937 COX17Q14061 63 aa5.56□□□□□ -1.52
SMAD3-212ENST00000559937 IGKV2-28A0A075B6P5 120 aa5.55□□□□□ -1.52
SMAD3-212ENST00000559937 FAM240AA0A1B0GVK7 77 aa5.55□□□□□ -1.52
SMAD3-212ENST00000559937 H0YGX0 51 aa5.55□□□□□ -1.52
SMAD3-212ENST00000559937 DEFB4AO15263 64 aa5.55□□□□□ -1.52
SMAD3-212ENST00000559937 IGKV2D-28P01615 120 aa5.55□□□□□ -1.52
SMAD3-212ENST00000559937 ANGP03950 147 aaKnown RBP5.55□□□□□ -1.52
SMAD3-212ENST00000559937 REG3AQ06141 175 aa5.55□□□□□ -1.52
SMAD3-212ENST00000559937 KIAA0087Q14695 138 aa5.55□□□□□ -1.52
SMAD3-212ENST00000559937 CFAP161Q6P656 301 aa5.55□□□□□ -1.52
SMAD3-212ENST00000559937 LINC00269Q8N2A0 174 aa5.55□□□□□ -1.52
SMAD3-212ENST00000559937 LINC00337Q8N6G1 96 aa5.55□□□□□ -1.52
SMAD3-212ENST00000559937 CHCHD10Q8WYQ3 142 aaPredicted RBP5.55□□□□□ -1.52
SMAD3-212ENST00000559937 A0A096LPF7 62 aa5.54□□□□□ -1.52
SMAD3-212ENST00000559937 TRAV8-4A0A0B4J246 113 aa5.54□□□□□ -1.52
SMAD3-212ENST00000559937 NDUFC2O95298 119 aa5.54□□□□□ -1.52
SMAD3-212ENST00000559937 CKS1BP61024 79 aa5.54□□□□□ -1.52
SMAD3-212ENST00000559937 EGFEM1PQ0D2K5 195 aa5.54□□□□□ -1.52
SMAD3-212ENST00000559937 C11orf68Q9H3H3 251 aaKnown RBP5.54□□□□□ -1.52
SMAD3-212ENST00000559937 PRR34Q9NV39 138 aa5.54□□□□□ -1.52
SMAD3-212ENST00000559937 KLK5Q9Y337 293 aaPredicted RBP5.54□□□□□ -1.52
SMAD3-212ENST00000559937 NOTCH1P46531 2555 aa5.53□□□□□ -1.52
SMAD3-212ENST00000559937 TRRAPQ9Y4A5 3859 aa5.53□□□□□ -1.52
SMAD3-212ENST00000559937 TEX49A0A1B0GTD5 131 aa5.52□□□□□ -1.53
SMAD3-212ENST00000559937 MALP21145 153 aa5.52□□□□□ -1.53
SMAD3-212ENST00000559937 PFN2P35080 140 aa5.52□□□□□ -1.53
SMAD3-212ENST00000559937 XGP55808 180 aa5.52□□□□□ -1.53
SMAD3-212ENST00000559937 CLPSL2Q6UWE3 100 aa5.52□□□□□ -1.53
SMAD3-212ENST00000559937 A0A1B0GX51 115 aa5.51□□□□□ -1.53
SMAD3-212ENST00000559937 ACYP1P07311 99 aa5.51□□□□□ -1.53
SMAD3-212ENST00000559937 HTN3P15516 51 aa5.51□□□□□ -1.53
SMAD3-212ENST00000559937 SMIM11BQ8TCY0 68 aa5.51□□□□□ -1.53
SMAD3-212ENST00000559937 NBEAL2Q6ZNJ1 2754 aa5.5□□□□□ -1.53
SMAD3-212ENST00000559937 MT-ATP8P03928 68 aa5.5□□□□□ -1.53
SMAD3-212ENST00000559937 BAALC-AS2P0C853 105 aa5.5□□□□□ -1.53
SMAD3-212ENST00000559937 Q6Q795 121 aa5.5□□□□□ -1.53
SMAD3-212ENST00000559937 LYPD5Q6UWN5 251 aa5.5□□□□□ -1.53
SMAD3-212ENST00000559937 GVQW2A0A096LPI5 108 aaPredicted RBP5.49□□□□□ -1.53
SMAD3-212ENST00000559937 A0A0J9YWU9 116 aa5.49□□□□□ -1.53
SMAD3-212ENST00000559937 DNAL4O96015 105 aa5.49□□□□□ -1.53
SMAD3-212ENST00000559937 INAFM2P0DMQ5 153 aa5.49□□□□□ -1.53
SMAD3-212ENST00000559937 KRTAP10-11P60412 298 aa5.49□□□□□ -1.53
SMAD3-212ENST00000559937 SPAG11BQ08648 103 aa5.49□□□□□ -1.53
SMAD3-212ENST00000559937 FAM218AQ96MZ4 157 aa5.49□□□□□ -1.53
SMAD3-212ENST00000559937 MEGF8Q7Z7M0 2845 aa5.49□□□□□ -1.53
SMAD3-212ENST00000559937 IGLV10-54A0A075B6I4 117 aa5.48□□□□□ -1.53
SMAD3-212ENST00000559937 A0A1B0GV72 72 aa5.48□□□□□ -1.53
SMAD3-212ENST00000559937 SNCGO76070 127 aa5.48□□□□□ -1.53
SMAD3-212ENST00000559937 OXLD1Q5BKU9 147 aa5.48□□□□□ -1.53
SMAD3-212ENST00000559937 KPRPQ5T749 579 aaPredicted RBP5.48□□□□□ -1.53
SMAD3-212ENST00000559937 ENHOQ6UWT2 76 aa5.48□□□□□ -1.53
SMAD3-212ENST00000559937 Q8N3U1 123 aa5.48□□□□□ -1.53
SMAD3-212ENST00000559937 C3orf56Q8N813 242 aa5.48□□□□□ -1.53
SMAD3-212ENST00000559937 OR13C6PQ8NH95 151 aa5.48□□□□□ -1.53
SMAD3-212ENST00000559937 TMEM126AQ9H061 195 aa5.48□□□□□ -1.53
SMAD3-212ENST00000559937 KLK12Q9UKR0 248 aa5.48□□□□□ -1.53
SMAD3-212ENST00000559937 F8WDY8 70 aa5.47□□□□□ -1.53
SMAD3-212ENST00000559937 LINC00167Q96N53 147 aa5.47□□□□□ -1.53
SMAD3-212ENST00000559937 C22orf24Q9Y442 160 aa5.47□□□□□ -1.53
SMAD3-212ENST00000559937 TGP01266 2768 aa5.47□□□□□ -1.53
SMAD3-212ENST00000559937 C15orf53Q8NAA6 179 aa5.46□□□□□ -1.54
SMAD3-212ENST00000559937 RETNQ9HD89 108 aa5.46□□□□□ -1.54
SMAD3-212ENST00000559937 A0A087WYN8 130 aa5.45□□□□□ -1.54
SMAD3-212ENST00000559937 LECT2O14960 151 aa5.45□□□□□ -1.54
SMAD3-212ENST00000559937 NANOS2P60321 138 aaKnown RBP5.45□□□□□ -1.54
SMAD3-212ENST00000559937 UNQ6190/PRO20217Q6UXQ8 127 aa5.45□□□□□ -1.54
SMAD3-212ENST00000559937 Q6ZTC4 211 aa5.45□□□□□ -1.54
SMAD3-212ENST00000559937 OBSCN-AS1Q96MR7 158 aa5.45□□□□□ -1.54
SMAD3-212ENST00000559937 GAGE2BQ13066 116 aa5.44□□□□□ -1.54
SMAD3-212ENST00000559937 GAGE2EQ4V326 116 aa5.44□□□□□ -1.54
SMAD3-212ENST00000559937 LINC01556Q5JQF7 62 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms