RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 A0A1B0GVY2 172 aa9.36□□□□□ -0.91
SMAD6-204ENST00000559931 COX7B2Q8TF08 81 aa9.36□□□□□ -0.91
SMAD6-204ENST00000559931 C14orf144Q96I85 54 aa9.36□□□□□ -0.91
SMAD6-204ENST00000559931 TMEM223A0PJW6 202 aa9.35□□□□□ -0.91
SMAD6-204ENST00000559931 HERVK_113P61574 105 aa9.35□□□□□ -0.91
SMAD6-204ENST00000559931 SYCNQ0VAF6 134 aa9.35□□□□□ -0.91
SMAD6-204ENST00000559931 C2orf48Q96LS8 159 aa9.35□□□□□ -0.91
SMAD6-204ENST00000559931 MIEN1Q9BRT3 115 aa9.35□□□□□ -0.91
SMAD6-204ENST00000559931 PAM16Q9Y3D7 125 aa9.35□□□□□ -0.91
SMAD6-204ENST00000559931 NDUFA1O15239 70 aa9.34□□□□□ -0.91
SMAD6-204ENST00000559931 SLPIP03973 132 aa9.34□□□□□ -0.91
SMAD6-204ENST00000559931 Q8IZM0 81 aa9.34□□□□□ -0.91
SMAD6-204ENST00000559931 BIRC6Q9NR09 4857 aa9.34□□□□□ -0.91
SMAD6-204ENST00000559931 F8WDY8 70 aa9.33□□□□□ -0.92
SMAD6-204ENST00000559931 CNBPP62633 177 aaKnown RBP9.33□□□□□ -0.92
SMAD6-204ENST00000559931 KIAA0087Q14695 138 aa9.33□□□□□ -0.92
SMAD6-204ENST00000559931 SPATA45Q537H7 98 aa9.33□□□□□ -0.92
SMAD6-204ENST00000559931 C2orf82Q6UX34 121 aa9.33□□□□□ -0.92
SMAD6-204ENST00000559931 ATOH7Q8N100 152 aa9.33□□□□□ -0.92
SMAD6-204ENST00000559931 CARD19Q96LW7 228 aa9.33□□□□□ -0.92
SMAD6-204ENST00000559931 DYNC1H1Q14204 4646 aaKnown RBP9.32□□□□□ -0.92
SMAD6-204ENST00000559931 IGLV5-39A0A0G2JS06 123 aa9.32□□□□□ -0.92
SMAD6-204ENST00000559931 C16orf90A8MZG2 172 aa9.32□□□□□ -0.92
SMAD6-204ENST00000559931 HSBP1L1C9JCN9 74 aa9.32□□□□□ -0.92
SMAD6-204ENST00000559931 LINC01620Q4KN68 170 aa9.32□□□□□ -0.92
SMAD6-204ENST00000559931 UNQ6190/PRO20217Q6UXQ8 127 aa9.32□□□□□ -0.92
SMAD6-204ENST00000559931 Q6ZRU5 148 aa9.32□□□□□ -0.92
SMAD6-204ENST00000559931 UQCR10Q9UDW1 63 aa9.32□□□□□ -0.92
SMAD6-204ENST00000559931 M0R143 59 aa9.31□□□□□ -0.92
SMAD6-204ENST00000559931 GCSHP23434 173 aa9.31□□□□□ -0.92
SMAD6-204ENST00000559931 STPG4Q8N801 248 aa9.31□□□□□ -0.92
SMAD6-204ENST00000559931 LEPROTO15243 131 aa9.3□□□□□ -0.92
SMAD6-204ENST00000559931 CXCL5P42830 114 aa9.3□□□□□ -0.92
SMAD6-204ENST00000559931 C9orf163Q8N9P6 203 aa9.3□□□□□ -0.92
SMAD6-204ENST00000559931 PLEKHB2Q96CS7 222 aa9.3□□□□□ -0.92
SMAD6-204ENST00000559931 C10orf25Q5T742 122 aa9.29□□□□□ -0.92
SMAD6-204ENST00000559931 LGALS3P17931 250 aaKnown RBP9.28□□□□□ -0.92
SMAD6-204ENST00000559931 TRBV30A0A0K0K1B3 111 aa9.27□□□□□ -0.93
SMAD6-204ENST00000559931 J3QQQ9 107 aa9.27□□□□□ -0.93
SMAD6-204ENST00000559931 RNF151Q2KHN1 245 aa9.27□□□□□ -0.93
SMAD6-204ENST00000559931 C6orf48Q9UBA6 75 aa9.27□□□□□ -0.93
SMAD6-204ENST00000559931 DNAH5Q8TE73 4624 aa9.27□□□□□ -0.93
SMAD6-204ENST00000559931 E9PLD3 99 aa9.26□□□□□ -0.93
SMAD6-204ENST00000559931 HNRNPA3P51991 378 aaKnown RBP9.26□□□□□ -0.93
SMAD6-204ENST00000559931 DPH3Q96FX2 82 aa9.26□□□□□ -0.93
SMAD6-204ENST00000559931 ZNF625Q96I27 306 aaPredicted RBP9.26□□□□□ -0.93
SMAD6-204ENST00000559931 NDUFA12Q9UI09 145 aa9.26□□□□□ -0.93
SMAD6-204ENST00000559931 PKIGQ9Y2B9 76 aa9.26□□□□□ -0.93
SMAD6-204ENST00000559931 LOC107984640A0A0U1RRK4 108 aa9.25□□□□□ -0.93
SMAD6-204ENST00000559931 MYMXA0A1B0GTQ4 84 aa9.25□□□□□ -0.93
SMAD6-204ENST00000559931 KRTAP10-1P60331 282 aa9.25□□□□□ -0.93
SMAD6-204ENST00000559931 C9orf116Q5BN46 136 aaPredicted RBP9.25□□□□□ -0.93
SMAD6-204ENST00000559931 SFTA2Q6UW10 78 aa9.25□□□□□ -0.93
SMAD6-204ENST00000559931 NMUP48645 174 aa9.24□□□□□ -0.93
SMAD6-204ENST00000559931 TSPEAR-AS2P59090 65 aa9.24□□□□□ -0.93
SMAD6-204ENST00000559931 RPL18AQ02543 176 aaKnown RBP9.24□□□□□ -0.93
SMAD6-204ENST00000559931 SDIM1Q6ZPB5 146 aa9.24□□□□□ -0.93
SMAD6-204ENST00000559931 GAGE2BQ13066 116 aa9.23□□□□□ -0.93
SMAD6-204ENST00000559931 MAJINQ3KP22 176 aa9.23□□□□□ -0.93
SMAD6-204ENST00000559931 ANKRD39Q53RE8 183 aa9.23□□□□□ -0.93
SMAD6-204ENST00000559931 IGKV2D-26A0A0A0MRZ7 120 aa9.22□□□□□ -0.93
SMAD6-204ENST00000559931 IGKV2-24A0A0C4DH68 120 aa9.22□□□□□ -0.93
SMAD6-204ENST00000559931 PFN2P35080 140 aa9.22□□□□□ -0.93
SMAD6-204ENST00000559931 HERV-K104P63124 156 aa9.22□□□□□ -0.93
SMAD6-204ENST00000559931 GAGE2EQ4V326 116 aa9.22□□□□□ -0.93
SMAD6-204ENST00000559931 SNHG12Q9BXW3 62 aa9.22□□□□□ -0.93
SMAD6-204ENST00000559931 GAGE2DQ9UEU5 116 aa9.22□□□□□ -0.93
SMAD6-204ENST00000559931 LRP1BQ9NZR2 4599 aa9.22□□□□□ -0.93
SMAD6-204ENST00000559931 MEIG1Q5JSS6 88 aa9.21□□□□□ -0.94
SMAD6-204ENST00000559931 ERG28Q9UKR5 140 aa9.21□□□□□ -0.94
SMAD6-204ENST00000559931 A0A0U1RRA0 63 aa9.2□□□□□ -0.94
SMAD6-204ENST00000559931 NDUFC2-KCTD14E9PQ53 114 aa9.2□□□□□ -0.94
SMAD6-204ENST00000559931 LINC00158P58513 81 aa9.2□□□□□ -0.94
SMAD6-204ENST00000559931 SLC25A34Q6PIV7 304 aa9.2□□□□□ -0.94
SMAD6-204ENST00000559931 A0A096LNI7 61 aa9.19□□□□□ -0.94
SMAD6-204ENST00000559931 ZNF815PA8K554 130 aa9.19□□□□□ -0.94
SMAD6-204ENST00000559931 CHTF8P0CG12 524 aa9.19□□□□□ -0.94
SMAD6-204ENST00000559931 TLX1NBP0CAT3 122 aa9.18□□□□□ -0.94
SMAD6-204ENST00000559931 PTTG1IPP53801 180 aa9.18□□□□□ -0.94
SMAD6-204ENST00000559931 COX17Q14061 63 aa9.18□□□□□ -0.94
SMAD6-204ENST00000559931 COL5A1-AS1Q5SY13 56 aa9.18□□□□□ -0.94
SMAD6-204ENST00000559931 Q6ZRP5 223 aa9.18□□□□□ -0.94
SMAD6-204ENST00000559931 TTTY13Q9BZ97 58 aa9.18□□□□□ -0.94
SMAD6-204ENST00000559931 LINC00474Q9P2X8 69 aa9.18□□□□□ -0.94
SMAD6-204ENST00000559931 SMIM13P0DJ93 91 aa9.17□□□□□ -0.94
SMAD6-204ENST00000559931 CIRBPQ14011 172 aaKnown RBP9.17□□□□□ -0.94
SMAD6-204ENST00000559931 FAM30AQ9NZY2 134 aa9.17□□□□□ -0.94
SMAD6-204ENST00000559931 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.17□□□□□ -0.94
SMAD6-204ENST00000559931 A0A1B0GV90 55 aa9.16□□□□□ -0.94
SMAD6-204ENST00000559931 PCP2Q8IVA1 136 aa9.16□□□□□ -0.94
SMAD6-204ENST00000559931 A0A0J9YXY3 114 aa9.15□□□□□ -0.94
SMAD6-204ENST00000559931 COX8AP10176 69 aa9.15□□□□□ -0.94
SMAD6-204ENST00000559931 BATFQ16520 125 aa9.15□□□□□ -0.94
SMAD6-204ENST00000559931 SCGB1D4Q6XE38 83 aa9.15□□□□□ -0.94
SMAD6-204ENST00000559931 XAGE1AQ9HD64 81 aa9.15□□□□□ -0.94
SMAD6-204ENST00000559931 KIAA1109Q2LD37 5005 aa9.15□□□□□ -0.94
SMAD6-204ENST00000559931 PANO1I0J062 215 aa9.14□□□□□ -0.95
SMAD6-204ENST00000559931 SPACA4Q8TDM5 124 aa9.14□□□□□ -0.95
SMAD6-204ENST00000559931 HAMPP81172 84 aa9.13□□□□□ -0.95
SMAD6-204ENST00000559931 APOBP04114 4563 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms