RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 TMEM131LA2VDJ0 1609 aa1□□□□□ -2.25
SPG11-218ENST00000559754 ALKQ9UM73 1620 aa1□□□□□ -2.25
SPG11-218ENST00000559754 SETD2Q9BYW2 2564 aaPredicted RBP1□□□□□ -2.25
SPG11-218ENST00000559754 HMGN2P05204 90 aaKnown RBP1□□□□□ -2.25
SPG11-218ENST00000559754 SNRPFP62306 86 aaKnown RBP1□□□□□ -2.25
SPG11-218ENST00000559754 ASH1LQ9NR48 2969 aaKnown RBP1□□□□□ -2.25
SPG11-218ENST00000559754 A0A0G2JMZ2 1700 aa1□□□□□ -2.25
SPG11-218ENST00000559754 PKD1L3Q7Z443 1732 aa1□□□□□ -2.25
SPG11-218ENST00000559754 LAMC1P11047 1609 aa1□□□□□ -2.25
SPG11-218ENST00000559754 ERCC6L2Q5T890 1561 aa1□□□□□ -2.25
SPG11-218ENST00000559754 PTPN13Q12923 2485 aa0.99□□□□□ -2.25
SPG11-218ENST00000559754 ABCA2Q9BZC7 2435 aa0.99□□□□□ -2.25
SPG11-218ENST00000559754 TRBV6-1A0A0K0K1D8 114 aa0.99□□□□□ -2.25
SPG11-218ENST00000559754 H3BQF6 201 aa0.99□□□□□ -2.25
SPG11-218ENST00000559754 S100A3P33764 101 aa0.99□□□□□ -2.25
SPG11-218ENST00000559754 PSENENQ9NZ42 101 aa0.99□□□□□ -2.25
SPG11-218ENST00000559754 NCOR2Q9Y618 2525 aa0.99□□□□□ -2.25
SPG11-218ENST00000559754 DNAJC13O75165 2243 aa0.99□□□□□ -2.25
SPG11-218ENST00000559754 KIF20BQ96Q89 1820 aa0.99□□□□□ -2.25
SPG11-218ENST00000559754 RRBP1Q9P2E9 1410 aaKnown RBP0.98□□□□□ -2.25
SPG11-218ENST00000559754 NHSL1Q5SYE7 1610 aa0.98□□□□□ -2.25
SPG11-218ENST00000559754 SPATA8Q6RVD6 105 aa0.98□□□□□ -2.25
SPG11-218ENST00000559754 SSBP3-AS1Q7Z2R9 100 aa0.98□□□□□ -2.25
SPG11-218ENST00000559754 FDCSPQ8NFU4 85 aa0.98□□□□□ -2.25
SPG11-218ENST00000559754 PLAC8Q9NZF1 115 aa0.98□□□□□ -2.25
SPG11-218ENST00000559754 SPCS1Q9Y6A9 102 aa0.98□□□□□ -2.25
SPG11-218ENST00000559754 ASXL3Q9C0F0 2248 aa0.98□□□□□ -2.25
SPG11-218ENST00000559754 JMJD1CQ15652 2540 aa0.98□□□□□ -2.25
SPG11-218ENST00000559754 TTC28Q96AY4 2481 aa0.98□□□□□ -2.25
SPG11-218ENST00000559754 NEXMIFQ5QGS0 1516 aa0.98□□□□□ -2.25
SPG11-218ENST00000559754 NCOR1O75376 2440 aa0.98□□□□□ -2.25
SPG11-218ENST00000559754 SETXQ7Z333 2677 aaKnown RBP0.98□□□□□ -2.25
SPG11-218ENST00000559754 LRRC9Q6ZRR7 1453 aa0.98□□□□□ -2.25
SPG11-218ENST00000559754 RYR2Q92736 4967 aa0.98□□□□□ -2.25
SPG11-218ENST00000559754 COL6A5A8TX70 2615 aa0.98□□□□□ -2.25
SPG11-218ENST00000559754 D6R8Y8 96 aa0.97□□□□□ -2.25
SPG11-218ENST00000559754 LEPROTL1O95214 131 aa0.97□□□□□ -2.25
SPG11-218ENST00000559754 ACYP1P07311 99 aa0.97□□□□□ -2.25
SPG11-218ENST00000559754 NMSQ5H8A3 153 aa0.97□□□□□ -2.25
SPG11-218ENST00000559754 LINC00643Q86TS7 51 aa0.97□□□□□ -2.25
SPG11-218ENST00000559754 MUSTN1Q8IVN3 82 aa0.97□□□□□ -2.25
SPG11-218ENST00000559754 FAM103A1Q9BTL3 118 aaKnown RBP0.97□□□□□ -2.25
SPG11-218ENST00000559754 ST20Q9HBF5 79 aa0.97□□□□□ -2.25
SPG11-218ENST00000559754 KCPQ6ZWJ8 1503 aa0.97□□□□□ -2.25
SPG11-218ENST00000559754 KDM5DQ9BY66 1539 aa0.97□□□□□ -2.25
SPG11-218ENST00000559754 SRCAPQ6ZRS2 3230 aa0.97□□□□□ -2.25
SPG11-218ENST00000559754 KMT2DO14686 5537 aa0.97□□□□□ -2.25
SPG11-218ENST00000559754 MAP3K1Q13233 1512 aa0.96□□□□□ -2.26
SPG11-218ENST00000559754 LRRIQ1Q96JM4 1722 aa0.96□□□□□ -2.26
SPG11-218ENST00000559754 KANTRA0A1W2PQU2 76 aa0.96□□□□□ -2.26
SPG11-218ENST00000559754 H0Y9P7 68 aa0.96□□□□□ -2.26
SPG11-218ENST00000559754 ADIRFQ15847 76 aa0.96□□□□□ -2.26
SPG11-218ENST00000559754 CFAP74Q9C0B2 1584 aa0.96□□□□□ -2.26
SPG11-218ENST00000559754 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.95□□□□□ -2.26
SPG11-218ENST00000559754 MAST4O15021 2626 aa0.95□□□□□ -2.26
SPG11-218ENST00000559754 DEFB107AQ8IZN7 70 aa0.95□□□□□ -2.26
SPG11-218ENST00000559754 UBE2D4Q9Y2X8 147 aa0.95□□□□□ -2.26
SPG11-218ENST00000559754 PTPN23Q9H3S7 1636 aa0.95□□□□□ -2.26
SPG11-218ENST00000559754 MDN1Q9NU22 5596 aa0.95□□□□□ -2.26
SPG11-218ENST00000559754 RGPD8O14715 1765 aaPredicted RBP0.95□□□□□ -2.26
SPG11-218ENST00000559754 RGPD5Q99666 1765 aa0.95□□□□□ -2.26
SPG11-218ENST00000559754 TULP4Q9NRJ4 1543 aa0.94□□□□□ -2.26
SPG11-218ENST00000559754 ANKHD1Q8IWZ3 2542 aaKnown RBP0.94□□□□□ -2.26
SPG11-218ENST00000559754 AHCTF1Q8WYP5 2266 aa0.94□□□□□ -2.26
SPG11-218ENST00000559754 LTN1O94822 1766 aa0.94□□□□□ -2.26
SPG11-218ENST00000559754 A0A0D9SFI3 127 aa0.94□□□□□ -2.26
SPG11-218ENST00000559754 IQCF6A8MYZ5 107 aa0.94□□□□□ -2.26
SPG11-218ENST00000559754 WFDC2Q14508 124 aa0.94□□□□□ -2.26
SPG11-218ENST00000559754 PAPPAQ13219 1627 aa0.93□□□□□ -2.26
SPG11-218ENST00000559754 SAMD9Q5K651 1589 aa0.93□□□□□ -2.26
SPG11-218ENST00000559754 USP9XQ93008 2570 aaPredicted RBP0.93□□□□□ -2.26
SPG11-218ENST00000559754 MYMXA0A1B0GTQ4 84 aa0.93□□□□□ -2.26
SPG11-218ENST00000559754 SPINK7P58062 85 aa0.93□□□□□ -2.26
SPG11-218ENST00000559754 GNGT1P63211 74 aa0.93□□□□□ -2.26
SPG11-218ENST00000559754 COX6A2Q02221 97 aa0.93□□□□□ -2.26
SPG11-218ENST00000559754 C6orf201Q7Z4U5 140 aa0.93□□□□□ -2.26
SPG11-218ENST00000559754 CNFNQ9BYD5 112 aa0.93□□□□□ -2.26
SPG11-218ENST00000559754 KIAA0556O60303 1618 aa0.93□□□□□ -2.26
SPG11-218ENST00000559754 LRRC37AA6NMS7 1700 aa0.92□□□□□ -2.26
SPG11-218ENST00000559754 PPRC1Q5VV67 1664 aaKnown RBP0.92□□□□□ -2.26
SPG11-218ENST00000559754 PLGLAQ15195 96 aa0.92□□□□□ -2.26
SPG11-218ENST00000559754 KRTAP5-10Q6L8G5 202 aa0.92□□□□□ -2.26
SPG11-218ENST00000559754 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
SPG11-218ENST00000559754 ATP7BP35670 1465 aa0.92□□□□□ -2.26
SPG11-218ENST00000559754 FAM208BQ5VWN6 2430 aa0.91□□□□□ -2.26
SPG11-218ENST00000559754 RGPD2P0DJD1 1756 aa0.91□□□□□ -2.26
SPG11-218ENST00000559754 ABCC1P33527 1531 aa0.91□□□□□ -2.26
SPG11-218ENST00000559754 TRBV7-4A0A0J9YYF1 115 aa0.91□□□□□ -2.26
SPG11-218ENST00000559754 ABCA13Q86UQ4 5058 aa0.91□□□□□ -2.26
SPG11-218ENST00000559754 QSER1Q2KHR3 1735 aa0.9□□□□□ -2.27
SPG11-218ENST00000559754 HYDINQ4G0P3 5121 aa0.9□□□□□ -2.27
SPG11-218ENST00000559754 TENM4Q6N022 2769 aa0.9□□□□□ -2.27
SPG11-218ENST00000559754 A0A1B0GU69 56 aa0.9□□□□□ -2.27
SPG11-218ENST00000559754 TP53AIP1Q9HCN2 124 aa0.9□□□□□ -2.27
SPG11-218ENST00000559754 MUC5ACP98088 5654 aa0.9□□□□□ -2.27
SPG11-218ENST00000559754 ABCA8O94911 1581 aa0.9□□□□□ -2.27
SPG11-218ENST00000559754 COL14A1Q05707 1796 aaKnown RBP0.9□□□□□ -2.27
SPG11-218ENST00000559754 SCN11AQ9UI33 1791 aa0.9□□□□□ -2.27
SPG11-218ENST00000559754 EPPK1P58107 5090 aaKnown RBP0.9□□□□□ -2.27
SPG11-218ENST00000559754 ZFHX3Q15911 3703 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms