RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 LOC389332A0A1B0GUA5 103 aa6.29□□□□□ -1.4
TRAF3-207ENST00000559734 TPRXLQ17RH7 258 aa6.29□□□□□ -1.4
TRAF3-207ENST00000559734 C9orf129Q5T035 196 aaKnown RBP6.29□□□□□ -1.4
TRAF3-207ENST00000559734 MAP1LC3AQ9H492 121 aa6.29□□□□□ -1.4
TRAF3-207ENST00000559734 ANAPC11Q9NYG5 84 aa6.29□□□□□ -1.4
TRAF3-207ENST00000559734 PYGO1Q9Y3Y4 419 aa6.29□□□□□ -1.4
TRAF3-207ENST00000559734 FSIP2Q5CZC0 6907 aa6.28□□□□□ -1.4
TRAF3-207ENST00000559734 IGLV4-3A0A075B6K6 122 aa6.28□□□□□ -1.4
TRAF3-207ENST00000559734 NUPR1O60356 82 aa6.28□□□□□ -1.4
TRAF3-207ENST00000559734 LINC00173Q6ZV60 143 aa6.28□□□□□ -1.4
TRAF3-207ENST00000559734 Q8N8P6 123 aa6.28□□□□□ -1.4
TRAF3-207ENST00000559734 ADCYAP1P18509 176 aa6.27□□□□□ -1.41
TRAF3-207ENST00000559734 RPL28P46779 137 aaKnown RBP6.27□□□□□ -1.41
TRAF3-207ENST00000559734 LINC00242Q5T6M2 205 aa6.27□□□□□ -1.41
TRAF3-207ENST00000559734 LINC00304Q8N9R0 145 aa6.27□□□□□ -1.41
TRAF3-207ENST00000559734 TMEM141Q96I45 108 aa6.27□□□□□ -1.41
TRAF3-207ENST00000559734 PACRGQ96M98 296 aaPredicted RBP6.27□□□□□ -1.41
TRAF3-207ENST00000559734 TGIF2-C20orf24A0A0A6YYL0 155 aa6.26□□□□□ -1.41
TRAF3-207ENST00000559734 NDUFC2-KCTD14E9PQ53 114 aa6.26□□□□□ -1.41
TRAF3-207ENST00000559734 IFITM2Q01629 132 aa6.26□□□□□ -1.41
TRAF3-207ENST00000559734 UQCC3Q6UW78 93 aa6.26□□□□□ -1.41
TRAF3-207ENST00000559734 C2orf82Q6UX34 121 aa6.26□□□□□ -1.41
TRAF3-207ENST00000559734 C2orf66Q6UXQ4 117 aa6.26□□□□□ -1.41
TRAF3-207ENST00000559734 TEX43Q6ZNM6 134 aa6.26□□□□□ -1.41
TRAF3-207ENST00000559734 LINC00469Q8N7U9 141 aa6.26□□□□□ -1.41
TRAF3-207ENST00000559734 CYSLTR1Q9Y271 337 aa6.26□□□□□ -1.41
TRAF3-207ENST00000559734 C22orf24Q9Y442 160 aa6.26□□□□□ -1.41
TRAF3-207ENST00000559734 TRBV30A0A0K0K1B3 111 aa6.25□□□□□ -1.41
TRAF3-207ENST00000559734 TMEM218A2RU14 115 aa6.25□□□□□ -1.41
TRAF3-207ENST00000559734 K7EMI3 77 aa6.25□□□□□ -1.41
TRAF3-207ENST00000559734 ORMDL2Q53FV1 153 aa6.25□□□□□ -1.41
TRAF3-207ENST00000559734 C2orf88Q9BSF0 95 aa6.25□□□□□ -1.41
TRAF3-207ENST00000559734 NXT2Q9NPJ8 142 aaKnown RBP6.25□□□□□ -1.41
TRAF3-207ENST00000559734 IGIPA6NJ69 53 aa6.24□□□□□ -1.41
TRAF3-207ENST00000559734 BCE1O60756 84 aa6.24□□□□□ -1.41
TRAF3-207ENST00000559734 NPSP0C0P6 89 aa6.24□□□□□ -1.41
TRAF3-207ENST00000559734 KIAA0087Q14695 138 aa6.24□□□□□ -1.41
TRAF3-207ENST00000559734 KRTAP13-2Q52LG2 175 aa6.24□□□□□ -1.41
TRAF3-207ENST00000559734 LBHQ53QV2 105 aaPredicted RBP6.24□□□□□ -1.41
TRAF3-207ENST00000559734 XP32Q5T750 250 aa6.24□□□□□ -1.41
TRAF3-207ENST00000559734 ZC2HC1BQ5TFG8 222 aa6.24□□□□□ -1.41
TRAF3-207ENST00000559734 Q6ZN92 141 aa6.24□□□□□ -1.41
TRAF3-207ENST00000559734 AMELXQ99217 191 aa6.24□□□□□ -1.41
TRAF3-207ENST00000559734 PPDPFQ9H3Y8 114 aa6.24□□□□□ -1.41
TRAF3-207ENST00000559734 TRAV9-1A0A075B6T8 112 aa6.23□□□□□ -1.41
TRAF3-207ENST00000559734 KIAA1644Q3SXP7 199 aa6.23□□□□□ -1.41
TRAF3-207ENST00000559734 LINC01561Q8N1V8 128 aa6.23□□□□□ -1.41
TRAF3-207ENST00000559734 VCX2Q9H322 139 aa6.23□□□□□ -1.41
TRAF3-207ENST00000559734 XAGE1AQ9HD64 81 aa6.23□□□□□ -1.41
TRAF3-207ENST00000559734 SEC11CQ9BY50 192 aa6.22□□□□□ -1.41
TRAF3-207ENST00000559734 IGKV2D-26A0A0A0MRZ7 120 aa6.21□□□□□ -1.42
TRAF3-207ENST00000559734 G0S2P27469 103 aa6.21□□□□□ -1.42
TRAF3-207ENST00000559734 FAM19A3Q7Z5A8 133 aa6.21□□□□□ -1.42
TRAF3-207ENST00000559734 MRPL55Q7Z7F7 128 aaKnown RBP6.21□□□□□ -1.42
TRAF3-207ENST00000559734 RPL37AP8A6NKH3 93 aa6.2□□□□□ -1.42
TRAF3-207ENST00000559734 UBE2AP49459 152 aa6.2□□□□□ -1.42
TRAF3-207ENST00000559734 PAPPA-AS1Q5QFB9 102 aa6.2□□□□□ -1.42
TRAF3-207ENST00000559734 COMMD7Q86VX2 200 aa6.2□□□□□ -1.42
TRAF3-207ENST00000559734 LINC00337Q8N6G1 96 aa6.2□□□□□ -1.42
TRAF3-207ENST00000559734 TOMM6Q96B49 74 aa6.2□□□□□ -1.42
TRAF3-207ENST00000559734 TIMM17AQ99595 171 aa6.2□□□□□ -1.42
TRAF3-207ENST00000559734 TOMM7Q9P0U1 55 aa6.2□□□□□ -1.42
TRAF3-207ENST00000559734 GAGE10A6NGK3 116 aa6.19□□□□□ -1.42
TRAF3-207ENST00000559734 PRSS2P07478 247 aa6.19□□□□□ -1.42
TRAF3-207ENST00000559734 S100PP25815 95 aa6.19□□□□□ -1.42
TRAF3-207ENST00000559734 CKS1BP61024 79 aa6.19□□□□□ -1.42
TRAF3-207ENST00000559734 SEC11AP67812 179 aa6.19□□□□□ -1.42
TRAF3-207ENST00000559734 GNB1LQ9BYB4 327 aa6.19□□□□□ -1.42
TRAF3-207ENST00000559734 HERVK_113P63121 156 aa6.18□□□□□ -1.42
TRAF3-207ENST00000559734 FAM229BQ4G0N7 80 aa6.18□□□□□ -1.42
TRAF3-207ENST00000559734 ERASQ7Z444 233 aa6.18□□□□□ -1.42
TRAF3-207ENST00000559734 Q8IZM0 81 aa6.18□□□□□ -1.42
TRAF3-207ENST00000559734 ALKBH7Q9BT30 221 aaPredicted RBP6.18□□□□□ -1.42
TRAF3-207ENST00000559734 CDKN2A-AS1Q9UH64 79 aa6.18□□□□□ -1.42
TRAF3-207ENST00000559734 LINC01546A6NGU7 62 aa6.17□□□□□ -1.42
TRAF3-207ENST00000559734 COX19Q49B96 90 aa6.17□□□□□ -1.42
TRAF3-207ENST00000559734 C6orf226Q5I0X4 101 aa6.17□□□□□ -1.42
TRAF3-207ENST00000559734 C10orf91Q5T1B1 145 aa6.17□□□□□ -1.42
TRAF3-207ENST00000559734 SCGB3A1Q96QR1 104 aa6.17□□□□□ -1.42
TRAF3-207ENST00000559734 KRTAP4-1Q9BYQ7 146 aa6.17□□□□□ -1.42
TRAF3-207ENST00000559734 GEMIN7Q9H840 131 aaKnown RBP6.17□□□□□ -1.42
TRAF3-207ENST00000559734 TP73-AS1Q9UF72 201 aa6.17□□□□□ -1.42
TRAF3-207ENST00000559734 RHEBQ15382 184 aa6.16□□□□□ -1.42
TRAF3-207ENST00000559734 ASB16-AS1Q495Z4 193 aa6.16□□□□□ -1.42
TRAF3-207ENST00000559734 LINC00167Q96N53 147 aa6.16□□□□□ -1.42
TRAF3-207ENST00000559734 LINC01549A6NIU2 74 aa6.15□□□□□ -1.42
TRAF3-207ENST00000559734 RPS10P5Q9NQ39 176 aa6.15□□□□□ -1.42
TRAF3-207ENST00000559734 IGLV5-45A0A087WSX0 123 aa6.14□□□□□ -1.43
TRAF3-207ENST00000559734 TINCRA0A1B0GVN0 87 aa6.14□□□□□ -1.43
TRAF3-207ENST00000559734 SMIM1B2RUZ4 78 aa6.14□□□□□ -1.43
TRAF3-207ENST00000559734 F8VRH5 84 aa6.14□□□□□ -1.43
TRAF3-207ENST00000559734 FABP9Q0Z7S8 132 aa6.14□□□□□ -1.43
TRAF3-207ENST00000559734 FA2HQ7L5A8 372 aa6.14□□□□□ -1.43
TRAF3-207ENST00000559734 SVIPQ8NHG7 77 aa6.14□□□□□ -1.43
TRAF3-207ENST00000559734 CXCL5P42830 114 aa6.13□□□□□ -1.43
TRAF3-207ENST00000559734 SEC61BP60468 96 aaKnown RBP6.13□□□□□ -1.43
TRAF3-207ENST00000559734 PRLHP81277 87 aa6.13□□□□□ -1.43
TRAF3-207ENST00000559734 PDZD11Q5EBL8 140 aa6.13□□□□□ -1.43
TRAF3-207ENST00000559734 KRTAP13-1Q8IUC0 172 aa6.13□□□□□ -1.43
TRAF3-207ENST00000559734 C3orf22Q8N5N4 141 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms