RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 PRADC1Q9BSG0 188 aa3.41□□□□□ -1.86
CASC4-207ENST00000559037 TIMM21Q9BVV7 248 aa3.41□□□□□ -1.86
CASC4-207ENST00000559037 CST9LQ9H4G1 147 aa3.41□□□□□ -1.86
CASC4-207ENST00000559037 JPT2Q9H910 190 aa3.41□□□□□ -1.86
CASC4-207ENST00000559037 HHLA3Q9XRX5 114 aa3.41□□□□□ -1.86
CASC4-207ENST00000559037 DNAH2Q9P225 4427 aa3.4□□□□□ -1.86
CASC4-207ENST00000559037 TRBV7-3A0A075B6L6 115 aa3.4□□□□□ -1.87
CASC4-207ENST00000559037 TRBV25-1A0A075B6N4 114 aa3.4□□□□□ -1.87
CASC4-207ENST00000559037 TRGV2A0A075B6R0 118 aa3.4□□□□□ -1.87
CASC4-207ENST00000559037 ZNF815PA8K554 130 aa3.4□□□□□ -1.87
CASC4-207ENST00000559037 EPM2AB3EWF7 344 aa3.4□□□□□ -1.87
CASC4-207ENST00000559037 K7EQD1 137 aa3.4□□□□□ -1.87
CASC4-207ENST00000559037 M0R2N4 97 aa3.4□□□□□ -1.87
CASC4-207ENST00000559037 UBE2L6O14933 153 aa3.4□□□□□ -1.87
CASC4-207ENST00000559037 ATP5G1P05496 136 aa3.4□□□□□ -1.87
CASC4-207ENST00000559037 DEFB130BP0DP73 79 aa3.4□□□□□ -1.87
CASC4-207ENST00000559037 DEFB130AP0DP74 79 aa3.4□□□□□ -1.87
CASC4-207ENST00000559037 HTN3P15516 51 aa3.4□□□□□ -1.87
CASC4-207ENST00000559037 MRPS36P82909 103 aaKnown RBP3.4□□□□□ -1.87
CASC4-207ENST00000559037 TMEM170BQ5T4T1 132 aa3.4□□□□□ -1.87
CASC4-207ENST00000559037 UFSP1Q6NVU6 142 aa3.4□□□□□ -1.87
CASC4-207ENST00000559037 LINC00336Q6ZUF6 198 aa3.4□□□□□ -1.87
CASC4-207ENST00000559037 C15orf53Q8NAA6 179 aa3.4□□□□□ -1.87
CASC4-207ENST00000559037 OR5A1Q8NGJ0 315 aa3.4□□□□□ -1.87
CASC4-207ENST00000559037 TMEM101Q96IK0 257 aa3.4□□□□□ -1.87
CASC4-207ENST00000559037 NOP10Q9NPE3 64 aaKnown RBP3.4□□□□□ -1.87
CASC4-207ENST00000559037 MRPL16Q9NX20 251 aaKnown RBP3.4□□□□□ -1.87
CASC4-207ENST00000559037 PKHD1P08F94 4074 aa3.4□□□□□ -1.87
CASC4-207ENST00000559037 TRBV6-4A0A1B0GX49 114 aa3.39□□□□□ -1.87
CASC4-207ENST00000559037 TMEM238C9JI98 176 aa3.39□□□□□ -1.87
CASC4-207ENST00000559037 F5H768 121 aa3.39□□□□□ -1.87
CASC4-207ENST00000559037 FABP2P12104 132 aa3.39□□□□□ -1.87
CASC4-207ENST00000559037 RPL39P62891 51 aaKnown RBP3.39□□□□□ -1.87
CASC4-207ENST00000559037 SRSF9Q13242 221 aaKnown RBP eCLIP3.39□□□□□ -1.87
CASC4-207ENST00000559037 NEGR1Q7Z3B1 354 aa3.39□□□□□ -1.87
CASC4-207ENST00000559037 PCP2Q8IVA1 136 aa3.39□□□□□ -1.87
CASC4-207ENST00000559037 CEND1Q8N111 149 aa3.39□□□□□ -1.87
CASC4-207ENST00000559037 GTSF1LQ9H1H1 148 aa3.39□□□□□ -1.87
CASC4-207ENST00000559037 GEMIN7Q9H840 131 aaKnown RBP3.39□□□□□ -1.87
CASC4-207ENST00000559037 CSDC2Q9Y534 153 aaKnown RBP3.39□□□□□ -1.87
CASC4-207ENST00000559037 PKD1P98161 4303 aa3.38□□□□□ -1.87
CASC4-207ENST00000559037 IGLV4-3A0A075B6K6 122 aa3.38□□□□□ -1.87
CASC4-207ENST00000559037 TRGV4A0A0C4DH28 118 aa3.38□□□□□ -1.87
CASC4-207ENST00000559037 TINCRA0A1B0GVN0 87 aa3.38□□□□□ -1.87
CASC4-207ENST00000559037 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
CASC4-207ENST00000559037 H3BNG1 76 aa3.38□□□□□ -1.87
CASC4-207ENST00000559037 J3QQQ9 107 aa3.38□□□□□ -1.87
CASC4-207ENST00000559037 TAX1BP3O14907 124 aa3.38□□□□□ -1.87
CASC4-207ENST00000559037 LEPROTO15243 131 aa3.38□□□□□ -1.87
CASC4-207ENST00000559037 HERVK_113P63121 156 aa3.38□□□□□ -1.87
CASC4-207ENST00000559037 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
CASC4-207ENST00000559037 AMMECR1LQ6DCA0 310 aa3.38□□□□□ -1.87
CASC4-207ENST00000559037 Q6ZTI0 123 aa3.38□□□□□ -1.87
CASC4-207ENST00000559037 Q6ZVH6 145 aa3.38□□□□□ -1.87
CASC4-207ENST00000559037 UBE2DNLQ8IWF7 75 aa3.38□□□□□ -1.87
CASC4-207ENST00000559037 Q8NBF4 154 aa3.38□□□□□ -1.87
CASC4-207ENST00000559037 ZNRF2Q8NHG8 242 aa3.38□□□□□ -1.87
CASC4-207ENST00000559037 VSIG2Q96IQ7 327 aa3.38□□□□□ -1.87
CASC4-207ENST00000559037 AMELXQ99217 191 aa3.38□□□□□ -1.87
CASC4-207ENST00000559037 TMEM243Q9BU79 118 aa3.38□□□□□ -1.87
CASC4-207ENST00000559037 SPANXB1Q9NS25 103 aaPredicted RBP3.38□□□□□ -1.87
CASC4-207ENST00000559037 TP73-AS1Q9UF72 201 aa3.38□□□□□ -1.87
CASC4-207ENST00000559037 LINC00588Q9Y4M8 146 aa3.38□□□□□ -1.87
CASC4-207ENST00000559037 IGLV4-69A0A075B6H9 119 aa3.37□□□□□ -1.87
CASC4-207ENST00000559037 TRAV26-1A0A087WT03 109 aa3.37□□□□□ -1.87
CASC4-207ENST00000559037 IGKV2D-26A0A0A0MRZ7 120 aa3.37□□□□□ -1.87
CASC4-207ENST00000559037 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.37□□□□□ -1.87
CASC4-207ENST00000559037 IGHV3-73A0A0B4J1V6 119 aa3.37□□□□□ -1.87
CASC4-207ENST00000559037 NBDYA0A0U1RRE5 68 aa3.37□□□□□ -1.87
CASC4-207ENST00000559037 CCL18P55774 89 aa3.37□□□□□ -1.87
CASC4-207ENST00000559037 CIRBPQ14011 172 aaKnown RBP3.37□□□□□ -1.87
CASC4-207ENST00000559037 ESRGQ1W209 222 aa3.37□□□□□ -1.87
CASC4-207ENST00000559037 C1orf134Q5TEV5 83 aa3.37□□□□□ -1.87
CASC4-207ENST00000559037 SFTA2Q6UW10 78 aa3.37□□□□□ -1.87
CASC4-207ENST00000559037 SH2D6Q7Z4S9 175 aa3.37□□□□□ -1.87
CASC4-207ENST00000559037 NHP2Q9NX24 153 aaKnown RBP3.37□□□□□ -1.87
CASC4-207ENST00000559037 UBE2D4Q9Y2X8 147 aa3.37□□□□□ -1.87
CASC4-207ENST00000559037 DYNC1H1Q14204 4646 aaKnown RBP3.37□□□□□ -1.87
CASC4-207ENST00000559037 KIAA1109Q2LD37 5005 aa3.37□□□□□ -1.87
CASC4-207ENST00000559037 DNAH11Q96DT5 4516 aa3.36□□□□□ -1.87
CASC4-207ENST00000559037 A0A096LPF7 62 aa3.36□□□□□ -1.87
CASC4-207ENST00000559037 IGHV1-58A0A0C4DH39 117 aa3.36□□□□□ -1.87
CASC4-207ENST00000559037 A0A1W2PPM0 123 aa3.36□□□□□ -1.87
CASC4-207ENST00000559037 TMEM223A0PJW6 202 aa3.36□□□□□ -1.87
CASC4-207ENST00000559037 CCL25O15444 150 aa3.36□□□□□ -1.87
CASC4-207ENST00000559037 ZNF22P17026 224 aaPredicted RBP3.36□□□□□ -1.87
CASC4-207ENST00000559037 XGP55808 180 aa3.36□□□□□ -1.87
CASC4-207ENST00000559037 UBE2D3P61077 147 aa3.36□□□□□ -1.87
CASC4-207ENST00000559037 UBE2D2P62837 147 aa3.36□□□□□ -1.87
CASC4-207ENST00000559037 Q8N377 158 aa3.36□□□□□ -1.87
CASC4-207ENST00000559037 UPK3BQ9BT76 320 aa3.36□□□□□ -1.87
CASC4-207ENST00000559037 CHCHD7Q9BUK0 85 aa3.36□□□□□ -1.87
CASC4-207ENST00000559037 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
CASC4-207ENST00000559037 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.35□□□□□ -1.87
CASC4-207ENST00000559037 A0A0J9YXY3 114 aa3.35□□□□□ -1.87
CASC4-207ENST00000559037 A0A0J9YY99 117 aa3.35□□□□□ -1.87
CASC4-207ENST00000559037 A0A1B0GWB2 263 aa3.35□□□□□ -1.87
CASC4-207ENST00000559037 IGKV2-29A2NJV5 120 aaPredicted RBP3.35□□□□□ -1.87
CASC4-207ENST00000559037 H3BUT2 72 aa3.35□□□□□ -1.87
CASC4-207ENST00000559037 J3QR89 54 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms