RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.54□□□□□ -1.2
TPM1-216ENST00000558910 NDUFA1O15239 70 aa7.54□□□□□ -1.2
TPM1-216ENST00000558910 GAGE2EQ4V326 116 aa7.54□□□□□ -1.2
TPM1-216ENST00000558910 C10orf91Q5T1B1 145 aa7.54□□□□□ -1.2
TPM1-216ENST00000558910 OR10D4PQ8NGN7 298 aa7.54□□□□□ -1.2
TPM1-216ENST00000558910 C2orf48Q96LS8 159 aa7.54□□□□□ -1.2
TPM1-216ENST00000558910 ALKBH7Q9BT30 221 aaPredicted RBP7.54□□□□□ -1.2
TPM1-216ENST00000558910 SMCO4Q9NRQ5 59 aa7.54□□□□□ -1.2
TPM1-216ENST00000558910 GAGE2DQ9UEU5 116 aa7.54□□□□□ -1.2
TPM1-216ENST00000558910 A0A1W2PNN7 141 aa7.53□□□□□ -1.2
TPM1-216ENST00000558910 IGIPA6NJ69 53 aa7.53□□□□□ -1.2
TPM1-216ENST00000558910 COX19Q49B96 90 aa7.53□□□□□ -1.2
TPM1-216ENST00000558910 TOMM6Q96B49 74 aa7.53□□□□□ -1.2
TPM1-216ENST00000558910 LINC00474Q9P2X8 69 aa7.53□□□□□ -1.2
TPM1-216ENST00000558910 TRAPPC1Q9Y5R8 145 aa7.53□□□□□ -1.2
TPM1-216ENST00000558910 A0A087WZ39 114 aa7.52□□□□□ -1.21
TPM1-216ENST00000558910 NDUFA6P56556 154 aa7.52□□□□□ -1.21
TPM1-216ENST00000558910 C9orf116Q5BN46 136 aaPredicted RBP7.52□□□□□ -1.21
TPM1-216ENST00000558910 AMELXQ99217 191 aa7.52□□□□□ -1.21
TPM1-216ENST00000558910 GEMIN7Q9H840 131 aaKnown RBP7.52□□□□□ -1.21
TPM1-216ENST00000558910 C6orf48Q9UBA6 75 aa7.52□□□□□ -1.21
TPM1-216ENST00000558910 PKIGQ9Y2B9 76 aa7.52□□□□□ -1.21
TPM1-216ENST00000558910 FAM168BA1KXE4 195 aa7.51□□□□□ -1.21
TPM1-216ENST00000558910 KRTAP29-1A8MX34 341 aaPredicted RBP7.51□□□□□ -1.21
TPM1-216ENST00000558910 PRSS2P07478 247 aa7.51□□□□□ -1.21
TPM1-216ENST00000558910 PMCHL1Q16048 86 aa7.51□□□□□ -1.21
TPM1-216ENST00000558910 PHF5AQ7RTV0 110 aaKnown RBP7.51□□□□□ -1.21
TPM1-216ENST00000558910 MT-ND6P03923 174 aa7.5□□□□□ -1.21
TPM1-216ENST00000558910 FAM19A5Q7Z5A7 132 aaPredicted RBP7.5□□□□□ -1.21
TPM1-216ENST00000558910 LINC00469Q8N7U9 141 aa7.5□□□□□ -1.21
TPM1-216ENST00000558910 PACRGQ96M98 296 aaPredicted RBP7.5□□□□□ -1.21
TPM1-216ENST00000558910 K7EMI3 77 aa7.49□□□□□ -1.21
TPM1-216ENST00000558910 G0S2P27469 103 aa7.49□□□□□ -1.21
TPM1-216ENST00000558910 PRR3P79522 188 aaKnown RBP7.49□□□□□ -1.21
TPM1-216ENST00000558910 KIAA0087Q14695 138 aa7.49□□□□□ -1.21
TPM1-216ENST00000558910 C6orf226Q5I0X4 101 aa7.49□□□□□ -1.21
TPM1-216ENST00000558910 Q6ZRP5 223 aa7.49□□□□□ -1.21
TPM1-216ENST00000558910 ERASQ7Z444 233 aa7.49□□□□□ -1.21
TPM1-216ENST00000558910 TIMM17AQ99595 171 aa7.49□□□□□ -1.21
TPM1-216ENST00000558910 MRPL35Q9NZE8 188 aaKnown RBP7.49□□□□□ -1.21
TPM1-216ENST00000558910 CDKN2A-AS1Q9UH64 79 aa7.49□□□□□ -1.21
TPM1-216ENST00000558910 CKS1BP61024 79 aa7.48□□□□□ -1.21
TPM1-216ENST00000558910 PAPPA-AS1Q5QFB9 102 aa7.48□□□□□ -1.21
TPM1-216ENST00000558910 SPINK8P0C7L1 97 aa7.47□□□□□ -1.21
TPM1-216ENST00000558910 HERVK_113P63121 156 aa7.47□□□□□ -1.21
TPM1-216ENST00000558910 SLC7A5P1Q8MH63 180 aa7.47□□□□□ -1.21
TPM1-216ENST00000558910 OXTP01178 125 aa7.46□□□□□ -1.22
TPM1-216ENST00000558910 CBLN2Q8IUK8 224 aa7.46□□□□□ -1.22
TPM1-216ENST00000558910 C18orf32Q8TCD1 76 aa7.46□□□□□ -1.22
TPM1-216ENST00000558910 CST9LQ9H4G1 147 aa7.46□□□□□ -1.22
TPM1-216ENST00000558910 SEC11AP67812 179 aa7.45□□□□□ -1.22
TPM1-216ENST00000558910 URB1-AS1Q96HZ7 61 aa7.45□□□□□ -1.22
TPM1-216ENST00000558910 NPSP0C0P6 89 aa7.44□□□□□ -1.22
TPM1-216ENST00000558910 LINC00614P0C842 121 aa7.44□□□□□ -1.22
TPM1-216ENST00000558910 RAB5BP61020 215 aa7.44□□□□□ -1.22
TPM1-216ENST00000558910 PMVKQ15126 192 aa7.44□□□□□ -1.22
TPM1-216ENST00000558910 C1orf137Q5JT78 98 aa7.44□□□□□ -1.22
TPM1-216ENST00000558910 XAGE1AQ9HD64 81 aa7.44□□□□□ -1.22
TPM1-216ENST00000558910 PSORS1C2Q9UIG4 136 aa7.44□□□□□ -1.22
TPM1-216ENST00000558910 TRBV30A0A0K0K1B3 111 aa7.43□□□□□ -1.22
TPM1-216ENST00000558910 TINCRA0A1B0GVN0 87 aa7.43□□□□□ -1.22
TPM1-216ENST00000558910 LINC01546A6NGU7 62 aa7.43□□□□□ -1.22
TPM1-216ENST00000558910 F8WDY8 70 aa7.43□□□□□ -1.22
TPM1-216ENST00000558910 UBE2BP63146 152 aa7.43□□□□□ -1.22
TPM1-216ENST00000558910 LINC01561Q8N1V8 128 aa7.43□□□□□ -1.22
TPM1-216ENST00000558910 COX7B2Q8TF08 81 aa7.43□□□□□ -1.22
TPM1-216ENST00000558910 A0A096LNJ9 63 aa7.42□□□□□ -1.22
TPM1-216ENST00000558910 SMIM1B2RUZ4 78 aa7.42□□□□□ -1.22
TPM1-216ENST00000558910 NDUFC2-KCTD14E9PQ53 114 aa7.42□□□□□ -1.22
TPM1-216ENST00000558910 HBDP02042 147 aa7.42□□□□□ -1.22
TPM1-216ENST00000558910 C9orf129Q5T035 196 aaKnown RBP7.42□□□□□ -1.22
TPM1-216ENST00000558910 FAM19A3Q7Z5A8 133 aa7.42□□□□□ -1.22
TPM1-216ENST00000558910 Q8IZM0 81 aa7.42□□□□□ -1.22
TPM1-216ENST00000558910 M0QXV9 152 aa7.41□□□□□ -1.22
TPM1-216ENST00000558910 TLX1NBP0CAT3 122 aa7.41□□□□□ -1.22
TPM1-216ENST00000558910 KRTAP11-1Q8IUC1 163 aa7.41□□□□□ -1.22
TPM1-216ENST00000558910 BAGE3Q86Y29 109 aa7.4□□□□□ -1.22
TPM1-216ENST00000558910 LINC01549A6NIU2 74 aa7.39□□□□□ -1.23
TPM1-216ENST00000558910 F8VRH5 84 aa7.39□□□□□ -1.23
TPM1-216ENST00000558910 H0Y8G0 127 aa7.39□□□□□ -1.23
TPM1-216ENST00000558910 H3BRM9 83 aa7.39□□□□□ -1.23
TPM1-216ENST00000558910 PDZD11Q5EBL8 140 aa7.39□□□□□ -1.23
TPM1-216ENST00000558910 SERTAD4-AS1Q5TG53 156 aa7.39□□□□□ -1.23
TPM1-216ENST00000558910 KRTAP7-1Q8IUC3 87 aa7.39□□□□□ -1.23
TPM1-216ENST00000558910 YPEL4Q96NS1 127 aa7.39□□□□□ -1.23
TPM1-216ENST00000558910 TNXBP22105 4242 aa7.39□□□□□ -1.23
TPM1-216ENST00000558910 MT1HL1P0DM35 61 aa7.38□□□□□ -1.23
TPM1-216ENST00000558910 TMEM170BQ5T4T1 132 aa7.38□□□□□ -1.23
TPM1-216ENST00000558910 SPINK6Q6UWN8 80 aa7.38□□□□□ -1.23
TPM1-216ENST00000558910 FAM19A2Q8N3H0 131 aa7.38□□□□□ -1.23
TPM1-216ENST00000558910 ZNF625Q96I27 306 aaPredicted RBP7.38□□□□□ -1.23
TPM1-216ENST00000558910 TRGC2P03986 189 aa7.37□□□□□ -1.23
TPM1-216ENST00000558910 IGLC3P0DOY3 106 aa7.37□□□□□ -1.23
TPM1-216ENST00000558910 ZNF22P17026 224 aaPredicted RBP7.37□□□□□ -1.23
TPM1-216ENST00000558910 S100A1P23297 94 aa7.37□□□□□ -1.23
TPM1-216ENST00000558910 PFN2P35080 140 aa7.37□□□□□ -1.23
TPM1-216ENST00000558910 HMCN2Q8NDA2 5059 aa7.37□□□□□ -1.23
TPM1-216ENST00000558910 IGLV5-45A0A087WSX0 123 aa7.36□□□□□ -1.23
TPM1-216ENST00000558910 GAGE10A6NGK3 116 aa7.36□□□□□ -1.23
TPM1-216ENST00000558910 C11orf86A6NJI1 115 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms