RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 Q6ZUT4 128 aa3.87□□□□□ -1.79
LRRC28-209ENST00000558861 LINC00173Q6ZV60 143 aa3.87□□□□□ -1.79
LRRC28-209ENST00000558861 UBE2WQ96B02 151 aa3.87□□□□□ -1.79
LRRC28-209ENST00000558861 A0A087WTM6 91 aa3.86□□□□□ -1.79
LRRC28-209ENST00000558861 S100A1P23297 94 aa3.86□□□□□ -1.79
LRRC28-209ENST00000558861 FCER1GP30273 86 aa3.86□□□□□ -1.79
LRRC28-209ENST00000558861 REG3AQ06141 175 aa3.86□□□□□ -1.79
LRRC28-209ENST00000558861 Q0VG73 95 aa3.86□□□□□ -1.79
LRRC28-209ENST00000558861 MIAQ16674 131 aa3.86□□□□□ -1.79
LRRC28-209ENST00000558861 CLPSL2Q6UWE3 100 aa3.86□□□□□ -1.79
LRRC28-209ENST00000558861 SPANXA1Q9NS26 97 aa3.86□□□□□ -1.79
LRRC28-209ENST00000558861 IGLV8-61A0A075B6I0 122 aa3.85□□□□□ -1.79
LRRC28-209ENST00000558861 LINC00959A0A1B0GUT2 108 aa3.85□□□□□ -1.79
LRRC28-209ENST00000558861 UBE2L6O14933 153 aa3.85□□□□□ -1.79
LRRC28-209ENST00000558861 ORMDL2Q53FV1 153 aa3.85□□□□□ -1.79
LRRC28-209ENST00000558861 RNASEKQ6P5S7 137 aaKnown RBP3.85□□□□□ -1.79
LRRC28-209ENST00000558861 ZNF664Q8N3J9 261 aa3.85□□□□□ -1.79
LRRC28-209ENST00000558861 OR5A1Q8NGJ0 315 aa3.85□□□□□ -1.79
LRRC28-209ENST00000558861 TOMM6Q96B49 74 aa3.85□□□□□ -1.79
LRRC28-209ENST00000558861 AMELXQ99217 191 aa3.85□□□□□ -1.79
LRRC28-209ENST00000558861 PCLOQ9Y6V0 5065 aa3.85□□□□□ -1.79
LRRC28-209ENST00000558861 IGKV2D-24A0A075B6R9 120 aa3.84□□□□□ -1.79
LRRC28-209ENST00000558861 TRAV8-4A0A0B4J246 113 aa3.84□□□□□ -1.79
LRRC28-209ENST00000558861 PDZD11Q5EBL8 140 aa3.84□□□□□ -1.79
LRRC28-209ENST00000558861 RNASE13Q5GAN3 156 aaKnown RBP3.84□□□□□ -1.79
LRRC28-209ENST00000558861 AMMECR1LQ6DCA0 310 aa3.84□□□□□ -1.79
LRRC28-209ENST00000558861 CHCHD10Q8WYQ3 142 aaPredicted RBP3.84□□□□□ -1.79
LRRC28-209ENST00000558861 TIMM17AQ99595 171 aa3.84□□□□□ -1.79
LRRC28-209ENST00000558861 CYSLTR1Q9Y271 337 aa3.84□□□□□ -1.79
LRRC28-209ENST00000558861 IGLV10-54A0A075B6I4 117 aa3.83□□□□□ -1.8
LRRC28-209ENST00000558861 IGHV3OR16-9A0A0B4J2B5 98 aa3.83□□□□□ -1.8
LRRC28-209ENST00000558861 NUPR1O60356 82 aa3.83□□□□□ -1.8
LRRC28-209ENST00000558861 HIST1H2BKO60814 126 aa3.83□□□□□ -1.8
LRRC28-209ENST00000558861 CRPP02741 224 aa3.83□□□□□ -1.8
LRRC28-209ENST00000558861 HIST1H2BJP06899 126 aa3.83□□□□□ -1.8
LRRC28-209ENST00000558861 LINC00614P0C842 121 aa3.83□□□□□ -1.8
LRRC28-209ENST00000558861 HIST1H2BOP23527 126 aa3.83□□□□□ -1.8
LRRC28-209ENST00000558861 HIST1H2BBP33778 126 aa3.83□□□□□ -1.8
LRRC28-209ENST00000558861 HIST1H2BDP58876 126 aa3.83□□□□□ -1.8
LRRC28-209ENST00000558861 HIST1H2BCP62807 126 aa3.83□□□□□ -1.8
LRRC28-209ENST00000558861 HIST2H2BEQ16778 126 aa3.83□□□□□ -1.8
LRRC28-209ENST00000558861 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.83□□□□□ -1.8
LRRC28-209ENST00000558861 FAM19A3Q7Z5A8 133 aa3.83□□□□□ -1.8
LRRC28-209ENST00000558861 C15orf56Q8N910 161 aa3.83□□□□□ -1.8
LRRC28-209ENST00000558861 BAALCQ8WXS3 180 aa3.83□□□□□ -1.8
LRRC28-209ENST00000558861 HIST1H2BHQ93079 126 aa3.83□□□□□ -1.8
LRRC28-209ENST00000558861 RMI2Q96E14 147 aa3.83□□□□□ -1.8
LRRC28-209ENST00000558861 HIST1H2BNQ99877 126 aa3.83□□□□□ -1.8
LRRC28-209ENST00000558861 HIST1H2BMQ99879 126 aa3.83□□□□□ -1.8
LRRC28-209ENST00000558861 SRRM2Q9UQ35 2752 aaKnown RBP3.83□□□□□ -1.8
LRRC28-209ENST00000558861 ABCA13Q86UQ4 5058 aa3.83□□□□□ -1.8
LRRC28-209ENST00000558861 LECT2O14960 151 aa3.82□□□□□ -1.8
LRRC28-209ENST00000558861 CCL25O15444 150 aa3.82□□□□□ -1.8
LRRC28-209ENST00000558861 SERF1AO75920 110 aa3.82□□□□□ -1.8
LRRC28-209ENST00000558861 FUSP35637 526 aaKnown RBP eCLIP3.82□□□□□ -1.8
LRRC28-209ENST00000558861 UBE2D1P51668 147 aa3.82□□□□□ -1.8
LRRC28-209ENST00000558861 PMCHL1Q16048 86 aa3.82□□□□□ -1.8
LRRC28-209ENST00000558861 COA6Q5JTJ3 125 aaKnown RBP3.82□□□□□ -1.8
LRRC28-209ENST00000558861 FA2HQ7L5A8 372 aa3.82□□□□□ -1.8
LRRC28-209ENST00000558861 Q8N814 137 aa3.82□□□□□ -1.8
LRRC28-209ENST00000558861 CHCHD1Q96BP2 118 aaKnown RBP3.82□□□□□ -1.8
LRRC28-209ENST00000558861 TMEM141Q96I45 108 aa3.82□□□□□ -1.8
LRRC28-209ENST00000558861 TMEM101Q96IK0 257 aa3.82□□□□□ -1.8
LRRC28-209ENST00000558861 MYCBP2O75592 4640 aa3.82□□□□□ -1.8
LRRC28-209ENST00000558861 TRAV13-1A0A0B4J241 112 aa3.81□□□□□ -1.8
LRRC28-209ENST00000558861 IGKV3OR2-268A0A0C4DH90 116 aa3.81□□□□□ -1.8
LRRC28-209ENST00000558861 LINC01549A6NIU2 74 aa3.81□□□□□ -1.8
LRRC28-209ENST00000558861 C1orf196B1AJZ1 125 aa3.81□□□□□ -1.8
LRRC28-209ENST00000558861 HBDP02042 147 aa3.81□□□□□ -1.8
LRRC28-209ENST00000558861 XCL1P47992 114 aa3.81□□□□□ -1.8
LRRC28-209ENST00000558861 COX6A2Q02221 97 aa3.81□□□□□ -1.8
LRRC28-209ENST00000558861 SMAGPQ0VAQ4 97 aa3.81□□□□□ -1.8
LRRC28-209ENST00000558861 PRR4Q16378 134 aa3.81□□□□□ -1.8
LRRC28-209ENST00000558861 C9orf129Q5T035 196 aaKnown RBP3.81□□□□□ -1.8
LRRC28-209ENST00000558861 SPATA12Q7Z6I5 190 aa3.81□□□□□ -1.8
LRRC28-209ENST00000558861 PPDPFQ9H3Y8 114 aa3.81□□□□□ -1.8
LRRC28-209ENST00000558861 GVQW2A0A096LPI5 108 aaPredicted RBP3.8□□□□□ -1.8
LRRC28-209ENST00000558861 PSCAO43653 123 aa3.8□□□□□ -1.8
LRRC28-209ENST00000558861 G0S2P27469 103 aa3.8□□□□□ -1.8
LRRC28-209ENST00000558861 KRTAP10-1P60331 282 aa3.8□□□□□ -1.8
LRRC28-209ENST00000558861 RAB5BP61020 215 aa3.8□□□□□ -1.8
LRRC28-209ENST00000558861 CNBPP62633 177 aaKnown RBP3.8□□□□□ -1.8
LRRC28-209ENST00000558861 SCGB3A1Q96QR1 104 aa3.8□□□□□ -1.8
LRRC28-209ENST00000558861 CST9LQ9H4G1 147 aa3.8□□□□□ -1.8
LRRC28-209ENST00000558861 IGLV4-69A0A075B6H9 119 aa3.79□□□□□ -1.8
LRRC28-209ENST00000558861 KRTAP1-4P0C5Y4 121 aa3.79□□□□□ -1.8
LRRC28-209ENST00000558861 KIAA0087Q14695 138 aa3.79□□□□□ -1.8
LRRC28-209ENST00000558861 SS18Q15532 418 aa3.79□□□□□ -1.8
LRRC28-209ENST00000558861 TEX43Q6ZNM6 134 aa3.79□□□□□ -1.8
LRRC28-209ENST00000558861 Q6ZSA8 131 aa3.79□□□□□ -1.8
LRRC28-209ENST00000558861 CEND1Q8N111 149 aa3.79□□□□□ -1.8
LRRC28-209ENST00000558861 FAM19A2Q8N3H0 131 aa3.79□□□□□ -1.8
LRRC28-209ENST00000558861 VCX2Q9H322 139 aa3.79□□□□□ -1.8
LRRC28-209ENST00000558861 PKHD1L1Q86WI1 4243 aa3.79□□□□□ -1.8
LRRC28-209ENST00000558861 IGHV3-64A0A075B6Q5 118 aa3.78□□□□□ -1.8
LRRC28-209ENST00000558861 A0A0J9YXV3 536 aa3.78□□□□□ -1.8
LRRC28-209ENST00000558861 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.78□□□□□ -1.8
LRRC28-209ENST00000558861 COX7A2LO14548 114 aa3.78□□□□□ -1.8
LRRC28-209ENST00000558861 IGLC3P0DOY3 106 aa3.78□□□□□ -1.8
LRRC28-209ENST00000558861 PMVKQ15126 192 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms