RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 RIGQ13278 110 aa5.7□□□□□ -1.5
SPG11-212ENST00000558790 TMEM241Q24JQ0 296 aa5.7□□□□□ -1.5
SPG11-212ENST00000558790 MRPL51Q4U2R6 128 aaKnown RBP5.7□□□□□ -1.5
SPG11-212ENST00000558790 C9orf129Q5T035 196 aaKnown RBP5.7□□□□□ -1.5
SPG11-212ENST00000558790 CARHSP1Q9Y2V2 147 aaKnown RBP5.7□□□□□ -1.5
SPG11-212ENST00000558790 HBBP68871 147 aa5.69□□□□□ -1.5
SPG11-212ENST00000558790 KIAA0087Q14695 138 aa5.69□□□□□ -1.5
SPG11-212ENST00000558790 C2orf82Q6UX34 121 aa5.69□□□□□ -1.5
SPG11-212ENST00000558790 OSTCQ9NRP0 149 aa5.69□□□□□ -1.5
SPG11-212ENST00000558790 SPANXA1Q9NS26 97 aa5.69□□□□□ -1.5
SPG11-212ENST00000558790 V9GYV3 84 aa5.69□□□□□ -1.5
SPG11-212ENST00000558790 A0A087X002 238 aa5.68□□□□□ -1.5
SPG11-212ENST00000558790 TGIF2-C20orf24A0A0A6YYL0 155 aa5.68□□□□□ -1.5
SPG11-212ENST00000558790 TRBV30A0A0K0K1B3 111 aa5.68□□□□□ -1.5
SPG11-212ENST00000558790 NDUFC2-KCTD14E9PQ53 114 aa5.68□□□□□ -1.5
SPG11-212ENST00000558790 RPL32P62910 135 aaKnown RBP5.68□□□□□ -1.5
SPG11-212ENST00000558790 MRPS36P82909 103 aaKnown RBP5.68□□□□□ -1.5
SPG11-212ENST00000558790 FAM104BQ5XKR9 115 aa5.68□□□□□ -1.5
SPG11-212ENST00000558790 C20orf78Q9BR46 151 aa5.68□□□□□ -1.5
SPG11-212ENST00000558790 SMIM2Q9BVW6 85 aa5.68□□□□□ -1.5
SPG11-212ENST00000558790 TRBV24-1A0A075B6N3 115 aa5.67□□□□□ -1.5
SPG11-212ENST00000558790 ZNF727A8MUV8 499 aa5.67□□□□□ -1.5
SPG11-212ENST00000558790 ZNF861PO60384 105 aa5.67□□□□□ -1.5
SPG11-212ENST00000558790 ALKAL2Q6UX46 152 aa5.67□□□□□ -1.5
SPG11-212ENST00000558790 TCTE3Q8IZS6 198 aa5.67□□□□□ -1.5
SPG11-212ENST00000558790 NAT8BQ9UHF3 227 aa5.67□□□□□ -1.5
SPG11-212ENST00000558790 TCAPO15273 167 aa5.66□□□□□ -1.5
SPG11-212ENST00000558790 CKS2P33552 79 aa5.66□□□□□ -1.5
SPG11-212ENST00000558790 LINC00242Q5T6M2 205 aa5.66□□□□□ -1.5
SPG11-212ENST00000558790 IGLV4-3A0A075B6K6 122 aa5.65□□□□□ -1.5
SPG11-212ENST00000558790 LINC00862A6NCI5 91 aa5.65□□□□□ -1.5
SPG11-212ENST00000558790 D6R8Y8 96 aa5.65□□□□□ -1.5
SPG11-212ENST00000558790 NUPR1O60356 82 aa5.65□□□□□ -1.5
SPG11-212ENST00000558790 NPYP01303 97 aa5.65□□□□□ -1.5
SPG11-212ENST00000558790 LINC00469Q8N7U9 141 aa5.65□□□□□ -1.5
SPG11-212ENST00000558790 PACRGQ96M98 296 aaPredicted RBP5.65□□□□□ -1.5
SPG11-212ENST00000558790 EIF5A2Q9GZV4 153 aaKnown RBP5.65□□□□□ -1.5
SPG11-212ENST00000558790 SRP19P09132 144 aaKnown RBP5.64□□□□□ -1.51
SPG11-212ENST00000558790 IFI27P40305 119 aaPredicted RBP5.64□□□□□ -1.51
SPG11-212ENST00000558790 FAM74A3Q4VXF1 159 aa5.64□□□□□ -1.51
SPG11-212ENST00000558790 RETNLBQ9BQ08 111 aa5.64□□□□□ -1.51
SPG11-212ENST00000558790 SMIM27A0A1W2PRY6 76 aa5.63□□□□□ -1.51
SPG11-212ENST00000558790 RPL23P62829 140 aaKnown RBP5.63□□□□□ -1.51
SPG11-212ENST00000558790 TYMSOSQ8TAI1 123 aa5.63□□□□□ -1.51
SPG11-212ENST00000558790 XAGE1AQ9HD64 81 aa5.63□□□□□ -1.51
SPG11-212ENST00000558790 C22orf24Q9Y442 160 aa5.63□□□□□ -1.51
SPG11-212ENST00000558790 CRYGAP11844 174 aa5.62□□□□□ -1.51
SPG11-212ENST00000558790 ADIRFQ15847 76 aa5.62□□□□□ -1.51
SPG11-212ENST00000558790 MRPL54Q6P161 138 aaKnown RBP5.62□□□□□ -1.51
SPG11-212ENST00000558790 TMEM141Q96I45 108 aa5.62□□□□□ -1.51
SPG11-212ENST00000558790 PYGO1Q9Y3Y4 419 aa5.62□□□□□ -1.51
SPG11-212ENST00000558790 A0A1B0GW15 77 aa5.61□□□□□ -1.51
SPG11-212ENST00000558790 A0A1B0GXF2 115 aa5.61□□□□□ -1.51
SPG11-212ENST00000558790 BCE1O60756 84 aa5.61□□□□□ -1.51
SPG11-212ENST00000558790 RPL28P46779 137 aaKnown RBP5.61□□□□□ -1.51
SPG11-212ENST00000558790 KRTAP13-2Q52LG2 175 aa5.61□□□□□ -1.51
SPG11-212ENST00000558790 ZC2HC1BQ5TFG8 222 aa5.61□□□□□ -1.51
SPG11-212ENST00000558790 TEX43Q6ZNM6 134 aa5.61□□□□□ -1.51
SPG11-212ENST00000558790 LINC00173Q6ZV60 143 aa5.61□□□□□ -1.51
SPG11-212ENST00000558790 MRPL55Q7Z7F7 128 aaKnown RBP5.61□□□□□ -1.51
SPG11-212ENST00000558790 LINC01561Q8N1V8 128 aa5.61□□□□□ -1.51
SPG11-212ENST00000558790 ANAPC11Q9NYG5 84 aa5.61□□□□□ -1.51
SPG11-212ENST00000558790 TOMM7Q9P0U1 55 aa5.61□□□□□ -1.51
SPG11-212ENST00000558790 SMIM1B2RUZ4 78 aa5.6□□□□□ -1.51
SPG11-212ENST00000558790 CKS1BP61024 79 aa5.6□□□□□ -1.51
SPG11-212ENST00000558790 LBHQ53QV2 105 aaPredicted RBP5.6□□□□□ -1.51
SPG11-212ENST00000558790 C2orf88Q9BSF0 95 aa5.6□□□□□ -1.51
SPG11-212ENST00000558790 TP73-AS1Q9UF72 201 aa5.6□□□□□ -1.51
SPG11-212ENST00000558790 F8W036 122 aa5.59□□□□□ -1.51
SPG11-212ENST00000558790 PPBPP02775 128 aa5.59□□□□□ -1.51
SPG11-212ENST00000558790 RAB5AP20339 215 aa5.59□□□□□ -1.51
SPG11-212ENST00000558790 TPRXLQ17RH7 258 aa5.59□□□□□ -1.51
SPG11-212ENST00000558790 Q8IZM0 81 aa5.59□□□□□ -1.51
SPG11-212ENST00000558790 ORMDL3Q8N138 153 aa5.59□□□□□ -1.51
SPG11-212ENST00000558790 RPL37AP8A6NKH3 93 aa5.58□□□□□ -1.52
SPG11-212ENST00000558790 S100A8P05109 93 aa5.58□□□□□ -1.52
SPG11-212ENST00000558790 Q6ZN92 141 aa5.58□□□□□ -1.52
SPG11-212ENST00000558790 KRTAP13-1Q8IUC0 172 aa5.58□□□□□ -1.52
SPG11-212ENST00000558790 LINC00304Q8N9R0 145 aa5.58□□□□□ -1.52
SPG11-212ENST00000558790 PRELID3AQ96N28 172 aa5.58□□□□□ -1.52
SPG11-212ENST00000558790 AMELXQ99217 191 aa5.58□□□□□ -1.52
SPG11-212ENST00000558790 ALKBH7Q9BT30 221 aaPredicted RBP5.58□□□□□ -1.52
SPG11-212ENST00000558790 NAT8Q9UHE5 227 aa5.58□□□□□ -1.52
SPG11-212ENST00000558790 C9JQL5 133 aa5.57□□□□□ -1.52
SPG11-212ENST00000558790 F8VRH5 84 aa5.57□□□□□ -1.52
SPG11-212ENST00000558790 C6orf226Q5I0X4 101 aa5.57□□□□□ -1.52
SPG11-212ENST00000558790 LINC00167Q96N53 147 aa5.57□□□□□ -1.52
SPG11-212ENST00000558790 KRTAP2-2Q9BYT5 123 aa5.57□□□□□ -1.52
SPG11-212ENST00000558790 CYSLTR1Q9Y271 337 aa5.57□□□□□ -1.52
SPG11-212ENST00000558790 LOC389332A0A1B0GUA5 103 aa5.56□□□□□ -1.52
SPG11-212ENST00000558790 FAM229BQ4G0N7 80 aa5.56□□□□□ -1.52
SPG11-212ENST00000558790 C2orf66Q6UXQ4 117 aa5.56□□□□□ -1.52
SPG11-212ENST00000558790 TMEM136Q6ZRR5 245 aa5.56□□□□□ -1.52
SPG11-212ENST00000558790 FAM19A3Q7Z5A8 133 aa5.56□□□□□ -1.52
SPG11-212ENST00000558790 AKAP14Q86UN6 197 aa5.56□□□□□ -1.52
SPG11-212ENST00000558790 CDKN2A-AS1Q9UH64 79 aa5.56□□□□□ -1.52
SPG11-212ENST00000558790 IGLV7-46A0A075B6I9 117 aa5.55□□□□□ -1.52
SPG11-212ENST00000558790 IGLV9-49A0A0B4J1Y8 123 aa5.55□□□□□ -1.52
SPG11-212ENST00000558790 CFC1BP0CG36 223 aa5.55□□□□□ -1.52
SPG11-212ENST00000558790 CFC1P0CG37 223 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms