RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	IGIP	A6NJ69	53 aa		4.45	□□□□□ -1.7
MARK3-215	ENST00000558787	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.45	□□□□□ -1.7
MARK3-215	ENST00000558787	SNRPE	P62304	92 aa	Known RBP	4.45	□□□□□ -1.7
MARK3-215	ENST00000558787	RPL39	P62891	51 aa	Known RBP	4.45	□□□□□ -1.7
MARK3-215	ENST00000558787	MRPS36	P82909	103 aa	Known RBP	4.45	□□□□□ -1.7
MARK3-215	ENST00000558787		Q6ZN92	141 aa		4.45	□□□□□ -1.7
MARK3-215	ENST00000558787	HIST3H2BB	Q8N257	126 aa		4.45	□□□□□ -1.7
MARK3-215	ENST00000558787	OR5A1	Q8NGJ0	315 aa		4.45	□□□□□ -1.7
MARK3-215	ENST00000558787	UBE2D4	Q9Y2X8	147 aa		4.45	□□□□□ -1.7
MARK3-215	ENST00000558787	IGHV3-64	A0A075B6Q5	118 aa		4.44	□□□□□ -1.7
MARK3-215	ENST00000558787	TRAV8-4	A0A0B4J246	113 aa		4.44	□□□□□ -1.7
MARK3-215	ENST00000558787	OXT	P01178	125 aa		4.44	□□□□□ -1.7
MARK3-215	ENST00000558787	CNBP	P62633	177 aa	Known RBP	4.44	□□□□□ -1.7
MARK3-215	ENST00000558787	ZNF664	Q8N3J9	261 aa		4.44	□□□□□ -1.7
MARK3-215	ENST00000558787	C15orf56	Q8N910	161 aa		4.44	□□□□□ -1.7
MARK3-215	ENST00000558787	IFI27L1	Q96BM0	104 aa		4.44	□□□□□ -1.7
MARK3-215	ENST00000558787	UBR4	Q5T4S7	5183 aa		4.43	□□□□□ -1.7
MARK3-215	ENST00000558787	IGLV4-3	A0A075B6K6	122 aa		4.43	□□□□□ -1.7
MARK3-215	ENST00000558787		A0A087WYN8	130 aa		4.43	□□□□□ -1.7
MARK3-215	ENST00000558787	CCL25	O15444	150 aa		4.43	□□□□□ -1.7
MARK3-215	ENST00000558787	IGKV2-30	P06310	120 aa		4.43	□□□□□ -1.7
MARK3-215	ENST00000558787	FABP4	P15090	132 aa		4.43	□□□□□ -1.7
MARK3-215	ENST00000558787	HIGD2B	Q4VC39	106 aa		4.43	□□□□□ -1.7
MARK3-215	ENST00000558787	TEX43	Q6ZNM6	134 aa		4.43	□□□□□ -1.7
MARK3-215	ENST00000558787	HIST1H2BL	Q99880	126 aa		4.43	□□□□□ -1.7
MARK3-215	ENST00000558787	C2orf88	Q9BSF0	95 aa		4.43	□□□□□ -1.7
MARK3-215	ENST00000558787	MAP1LC3C	Q9BXW4	147 aa		4.43	□□□□□ -1.7
MARK3-215	ENST00000558787	VCX2	Q9H322	139 aa		4.43	□□□□□ -1.7
MARK3-215	ENST00000558787	CDC42SE2	Q9NRR3	84 aa		4.43	□□□□□ -1.7
MARK3-215	ENST00000558787	IFITM10	A6NMD0	228 aa		4.42	□□□□□ -1.7
MARK3-215	ENST00000558787	AKR1D1	P51857	326 aa		4.42	□□□□□ -1.7
MARK3-215	ENST00000558787	COX6A2	Q02221	97 aa		4.42	□□□□□ -1.7
MARK3-215	ENST00000558787	CIRBP	Q14011	172 aa	Known RBP	4.42	□□□□□ -1.7
MARK3-215	ENST00000558787	PMVK	Q15126	192 aa		4.42	□□□□□ -1.7
MARK3-215	ENST00000558787	SERTAD4-AS1	Q5TG53	156 aa		4.42	□□□□□ -1.7
MARK3-215	ENST00000558787		Q6ZUT4	128 aa		4.42	□□□□□ -1.7
MARK3-215	ENST00000558787	SPACA4	Q8TDM5	124 aa		4.42	□□□□□ -1.7
MARK3-215	ENST00000558787	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.42	□□□□□ -1.7
MARK3-215	ENST00000558787	AMELX	Q99217	191 aa		4.42	□□□□□ -1.7
MARK3-215	ENST00000558787	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.41	□□□□□ -1.7
MARK3-215	ENST00000558787	TRAV12-1	A0A0B4J245	112 aa		4.41	□□□□□ -1.7
MARK3-215	ENST00000558787	IGKV2-24	A0A0C4DH68	120 aa		4.41	□□□□□ -1.7
MARK3-215	ENST00000558787	C20orf202	A1L168	122 aa		4.41	□□□□□ -1.7
MARK3-215	ENST00000558787	SYS1-DBNDD2	H3BUS1	97 aa		4.41	□□□□□ -1.7
MARK3-215	ENST00000558787	MT1HL1	P0DM35	61 aa		4.41	□□□□□ -1.7
MARK3-215	ENST00000558787	SEC11A	P67812	179 aa		4.41	□□□□□ -1.7
MARK3-215	ENST00000558787	LINC00526	Q96FQ7	95 aa		4.41	□□□□□ -1.7
MARK3-215	ENST00000558787	OPRPN	Q99935	248 aa	Predicted RBP	4.41	□□□□□ -1.7
MARK3-215	ENST00000558787	CST9L	Q9H4G1	147 aa		4.41	□□□□□ -1.7
MARK3-215	ENST00000558787	C3orf79	P0CE67	100 aa		4.4	□□□□□ -1.71
MARK3-215	ENST00000558787	XCL1	P47992	114 aa		4.4	□□□□□ -1.71
MARK3-215	ENST00000558787	KRTDAP	P60985	99 aa		4.4	□□□□□ -1.71
MARK3-215	ENST00000558787	SS18	Q15532	418 aa		4.4	□□□□□ -1.71
MARK3-215	ENST00000558787	MAJIN	Q3KP22	176 aa		4.4	□□□□□ -1.71
MARK3-215	ENST00000558787	CFAP161	Q6P656	301 aa		4.4	□□□□□ -1.71
MARK3-215	ENST00000558787	PET117	Q6UWS5	81 aa		4.4	□□□□□ -1.71
MARK3-215	ENST00000558787	LINC00173	Q6ZV60	143 aa		4.4	□□□□□ -1.71
MARK3-215	ENST00000558787	FAM104A	Q969W3	186 aa		4.4	□□□□□ -1.71
MARK3-215	ENST00000558787	PLAC8	Q9NZF1	115 aa		4.4	□□□□□ -1.71
MARK3-215	ENST00000558787	TRAV13-1	A0A0B4J241	112 aa		4.39	□□□□□ -1.71
MARK3-215	ENST00000558787	LINC00959	A0A1B0GUT2	108 aa		4.39	□□□□□ -1.71
MARK3-215	ENST00000558787	TINCR	A0A1B0GVN0	87 aa		4.39	□□□□□ -1.71
MARK3-215	ENST00000558787		F8VRH5	84 aa		4.39	□□□□□ -1.71
MARK3-215	ENST00000558787		H0Y8G0	127 aa		4.39	□□□□□ -1.71
MARK3-215	ENST00000558787	PLN	P26678	52 aa		4.39	□□□□□ -1.71
MARK3-215	ENST00000558787	UBE2D1	P51668	147 aa		4.39	□□□□□ -1.71
MARK3-215	ENST00000558787	HERVK_113	P63121	156 aa		4.39	□□□□□ -1.71
MARK3-215	ENST00000558787	RNASE13	Q5GAN3	156 aa	Known RBP	4.39	□□□□□ -1.71
MARK3-215	ENST00000558787	FAM19A3	Q7Z5A8	133 aa		4.39	□□□□□ -1.71
MARK3-215	ENST00000558787	OR10D4P	Q8NGN7	298 aa		4.39	□□□□□ -1.71
MARK3-215	ENST00000558787	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.39	□□□□□ -1.71
MARK3-215	ENST00000558787	TNXB	P22105	4242 aa		4.39	□□□□□ -1.71
MARK3-215	ENST00000558787		A0A096LNI7	61 aa		4.38	□□□□□ -1.71
MARK3-215	ENST00000558787	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.38	□□□□□ -1.71
MARK3-215	ENST00000558787	DPM2	O94777	84 aa		4.38	□□□□□ -1.71
MARK3-215	ENST00000558787	IGLC3	P0DOY3	106 aa		4.38	□□□□□ -1.71
MARK3-215	ENST00000558787	LINC01545	Q5VT33	79 aa		4.38	□□□□□ -1.71
MARK3-215	ENST00000558787	STPG4	Q8N801	248 aa		4.38	□□□□□ -1.71
MARK3-215	ENST00000558787	GEMIN7	Q9H840	131 aa	Known RBP	4.38	□□□□□ -1.71
MARK3-215	ENST00000558787		H3BRM9	83 aa		4.37	□□□□□ -1.71
MARK3-215	ENST00000558787	IGKC	P01834	107 aa		4.37	□□□□□ -1.71
MARK3-215	ENST00000558787	LINC00242	Q5T6M2	205 aa		4.37	□□□□□ -1.71
MARK3-215	ENST00000558787	ZC2HC1B	Q5TFG8	222 aa		4.37	□□□□□ -1.71
MARK3-215	ENST00000558787	CD164L2	Q6UWJ8	174 aa		4.37	□□□□□ -1.71
MARK3-215	ENST00000558787		Q6ZRU5	148 aa		4.37	□□□□□ -1.71
MARK3-215	ENST00000558787	C7orf33	Q8WU49	177 aa		4.37	□□□□□ -1.71
MARK3-215	ENST00000558787	MRPL35	Q9NZE8	188 aa	Known RBP	4.37	□□□□□ -1.71
MARK3-215	ENST00000558787	IGLV4-69	A0A075B6H9	119 aa		4.36	□□□□□ -1.71
MARK3-215	ENST00000558787	IGLV5-45	A0A087WSX0	123 aa		4.36	□□□□□ -1.71
MARK3-215	ENST00000558787	IGHV1-58	A0A0C4DH39	117 aa		4.36	□□□□□ -1.71
MARK3-215	ENST00000558787		A0A0J9YXV3	536 aa		4.36	□□□□□ -1.71
MARK3-215	ENST00000558787	COX7A2L	O14548	114 aa		4.36	□□□□□ -1.71
MARK3-215	ENST00000558787	SCGB1D1	O95968	90 aa		4.36	□□□□□ -1.71
MARK3-215	ENST00000558787	PRR3	P79522	188 aa	Known RBP	4.36	□□□□□ -1.71
MARK3-215	ENST00000558787	LINC01561	Q8N1V8	128 aa		4.36	□□□□□ -1.71
MARK3-215	ENST00000558787	LINC00469	Q8N7U9	141 aa		4.36	□□□□□ -1.71
MARK3-215	ENST00000558787	CARD19	Q96LW7	228 aa		4.36	□□□□□ -1.71
MARK3-215	ENST00000558787		A0A087WZ39	114 aa		4.35	□□□□□ -1.71
MARK3-215	ENST00000558787	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.35	□□□□□ -1.71
MARK3-215	ENST00000558787	LOC105371267	A0A1B0GV96	52 aa		4.35	□□□□□ -1.71

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