RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-208ENST00000558768 FHL2Q14192 279 aa7.01□□□□□ -1.29
TRPM1-208ENST00000558768 IGFL3Q6UXB1 125 aa7.01□□□□□ -1.29
TRPM1-208ENST00000558768 PIP4P1Q86T03 277 aa7.01□□□□□ -1.29
TRPM1-208ENST00000558768 CDC42SE2Q9NRR3 84 aa7.01□□□□□ -1.29
TRPM1-208ENST00000558768 NOTCH2Q04721 2471 aa7.01□□□□□ -1.29
TRPM1-208ENST00000558768 A0A1W2PNU3 283 aaPredicted RBP7□□□□□ -1.29
TRPM1-208ENST00000558768 ZNF706Q9Y5V0 76 aaPredicted RBP7□□□□□ -1.29
TRPM1-208ENST00000558768 RNF223E7ERA6 249 aa7□□□□□ -1.29
TRPM1-208ENST00000558768 A8MUN3 132 aa7□□□□□ -1.29
TRPM1-208ENST00000558768 PRR9Q5T870 116 aa7□□□□□ -1.29
TRPM1-208ENST00000558768 MAP6D1Q9H9H5 199 aa7□□□□□ -1.29
TRPM1-208ENST00000558768 C9orf66Q5T8R8 295 aa6.99□□□□□ -1.29
TRPM1-208ENST00000558768 F8W735 103 aaPredicted RBP6.99□□□□□ -1.29
TRPM1-208ENST00000558768 C9orf116Q5BN46 136 aaPredicted RBP6.98□□□□□ -1.29
TRPM1-208ENST00000558768 KLLNB2CW77 178 aa6.98□□□□□ -1.29
TRPM1-208ENST00000558768 PROK1P58294 105 aa6.98□□□□□ -1.29
TRPM1-208ENST00000558768 AMELXQ99217 191 aa6.98□□□□□ -1.29
TRPM1-208ENST00000558768 ERC2-IT1O76042 136 aa6.97□□□□□ -1.29
TRPM1-208ENST00000558768 Q9UF83 564 aa6.97□□□□□ -1.29
TRPM1-208ENST00000558768 ODF3BA8MYP8 253 aa6.97□□□□□ -1.29
TRPM1-208ENST00000558768 SMIM29Q86T20 159 aa6.97□□□□□ -1.29
TRPM1-208ENST00000558768 A0A1B0GW54 56 aa6.96□□□□□ -1.29
TRPM1-208ENST00000558768 ACYP2P14621 99 aa6.96□□□□□ -1.3
TRPM1-208ENST00000558768 CCDC168Q8NDH2 2452 aa6.96□□□□□ -1.3
TRPM1-208ENST00000558768 DEFB135Q30KP9 77 aa6.95□□□□□ -1.3
TRPM1-208ENST00000558768 C2orf48Q96LS8 159 aa6.95□□□□□ -1.3
TRPM1-208ENST00000558768 LINC00474Q9P2X8 69 aa6.95□□□□□ -1.3
TRPM1-208ENST00000558768 KLKP1Q107X0 134 aa6.95□□□□□ -1.3
TRPM1-208ENST00000558768 A0A087WSZ3 146 aa6.94□□□□□ -1.3
TRPM1-208ENST00000558768 CYSRT1A8MQ03 144 aa6.94□□□□□ -1.3
TRPM1-208ENST00000558768 TP53AIP1Q9HCN2 124 aa6.94□□□□□ -1.3
TRPM1-208ENST00000558768 LOC100131303A0A0U1RQF7 123 aa6.94□□□□□ -1.3
TRPM1-208ENST00000558768 EGFEM1PQ0D2K5 195 aa6.94□□□□□ -1.3
TRPM1-208ENST00000558768 TM2D3Q9BRN9 247 aa6.94□□□□□ -1.3
TRPM1-208ENST00000558768 SPINK1P00995 79 aa6.93□□□□□ -1.3
TRPM1-208ENST00000558768 LINC00337Q8N6G1 96 aa6.93□□□□□ -1.3
TRPM1-208ENST00000558768 LOC101927531A0A1B0GV80 90 aa6.93□□□□□ -1.3
TRPM1-208ENST00000558768 Q6ZTC4 211 aa6.93□□□□□ -1.3
TRPM1-208ENST00000558768 H3BS24 57 aa6.93□□□□□ -1.3
TRPM1-208ENST00000558768 ZNF580Q9UK33 172 aa6.92□□□□□ -1.3
TRPM1-208ENST00000558768 KPRPQ5T749 579 aaPredicted RBP6.92□□□□□ -1.3
TRPM1-208ENST00000558768 SPATA3Q8NHX4 192 aa6.92□□□□□ -1.3
TRPM1-208ENST00000558768 DEFB4AO15263 64 aa6.91□□□□□ -1.3
TRPM1-208ENST00000558768 MAPK1IP1LQ8NDC0 245 aa6.91□□□□□ -1.3
TRPM1-208ENST00000558768 A6NDX4 124 aa6.91□□□□□ -1.3
TRPM1-208ENST00000558768 KIF25-AS1Q9Y6Z4 181 aa6.91□□□□□ -1.3
TRPM1-208ENST00000558768 IGHV6-1A0A0B4J1U7 121 aa6.91□□□□□ -1.3
TRPM1-208ENST00000558768 UNQ6190/PRO20217Q6UXQ8 127 aa6.91□□□□□ -1.3
TRPM1-208ENST00000558768 C4orf3Q8WVX3 66 aa6.91□□□□□ -1.3
TRPM1-208ENST00000558768 TRAV10A0A0B4J240 114 aa6.9□□□□□ -1.3
TRPM1-208ENST00000558768 LINC01600Q96MT4 127 aa6.9□□□□□ -1.3
TRPM1-208ENST00000558768 PRR3P79522 188 aaKnown RBP6.9□□□□□ -1.3
TRPM1-208ENST00000558768 RAI1Q7Z5J4 1906 aaPredicted RBP6.9□□□□□ -1.3
TRPM1-208ENST00000558768 RPL37AP8A6NKH3 93 aa6.9□□□□□ -1.31
TRPM1-208ENST00000558768 PLA2G2CQ5R387 149 aa6.89□□□□□ -1.31
TRPM1-208ENST00000558768 PRR15Q8IV56 129 aa6.89□□□□□ -1.31
TRPM1-208ENST00000558768 UQCR11O14957 56 aa6.89□□□□□ -1.31
TRPM1-208ENST00000558768 ZNF702PQ9H963 129 aa6.89□□□□□ -1.31
TRPM1-208ENST00000558768 HIVEP2P31629 2446 aa6.89□□□□□ -1.31
TRPM1-208ENST00000558768 UTRNP46939 3433 aa6.89□□□□□ -1.31
TRPM1-208ENST00000558768 ELOF1P60002 83 aaKnown RBP6.89□□□□□ -1.31
TRPM1-208ENST00000558768 DEFB116Q30KQ4 102 aa6.89□□□□□ -1.31
TRPM1-208ENST00000558768 LELP1Q5T871 98 aa6.89□□□□□ -1.31
TRPM1-208ENST00000558768 LINC00482Q8N8I6 264 aa6.89□□□□□ -1.31
TRPM1-208ENST00000558768 LINC00315P59091 139 aa6.88□□□□□ -1.31
TRPM1-208ENST00000558768 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.88□□□□□ -1.31
TRPM1-208ENST00000558768 CHCHD7Q9BUK0 85 aa6.88□□□□□ -1.31
TRPM1-208ENST00000558768 COX6A2Q02221 97 aa6.88□□□□□ -1.31
TRPM1-208ENST00000558768 ABCA2Q9BZC7 2435 aa6.88□□□□□ -1.31
TRPM1-208ENST00000558768 DEFB114Q30KQ6 69 aa6.88□□□□□ -1.31
TRPM1-208ENST00000558768 IGLV9-49A0A0B4J1Y8 123 aa6.87□□□□□ -1.31
TRPM1-208ENST00000558768 TRAV22A0A0B4J277 110 aa6.87□□□□□ -1.31
TRPM1-208ENST00000558768 Q96MF0 132 aa6.87□□□□□ -1.31
TRPM1-208ENST00000558768 LOC110117498A0A087WWA1 95 aa6.87□□□□□ -1.31
TRPM1-208ENST00000558768 H7BZZ5 65 aa6.87□□□□□ -1.31
TRPM1-208ENST00000558768 SSBP3-AS1Q7Z2R9 100 aa6.86□□□□□ -1.31
TRPM1-208ENST00000558768 Q8N2B8 174 aa6.86□□□□□ -1.31
TRPM1-208ENST00000558768 C6orf48Q9UBA6 75 aa6.86□□□□□ -1.31
TRPM1-208ENST00000558768 X6R8D5 127 aa6.86□□□□□ -1.31
TRPM1-208ENST00000558768 Q6ZQT0 140 aa6.86□□□□□ -1.31
TRPM1-208ENST00000558768 ZFP36P26651 326 aaKnown RBP6.85□□□□□ -1.31
TRPM1-208ENST00000558768 FSHBP01225 129 aa6.85□□□□□ -1.31
TRPM1-208ENST00000558768 BBC3Q96PG8 261 aaPredicted RBP6.85□□□□□ -1.31
TRPM1-208ENST00000558768 IGLV5-39A0A0G2JS06 123 aa6.84□□□□□ -1.31
TRPM1-208ENST00000558768 Q5XG85 94 aa6.84□□□□□ -1.32
TRPM1-208ENST00000558768 C6orf223Q8N319 242 aa6.83□□□□□ -1.32
TRPM1-208ENST00000558768 C11orf72Q8NBR9 251 aa6.83□□□□□ -1.32
TRPM1-208ENST00000558768 Q9BRP9 147 aa6.83□□□□□ -1.32
TRPM1-208ENST00000558768 RBM12B-AS1Q9P1G2 102 aa6.83□□□□□ -1.32
TRPM1-208ENST00000558768 CDSNQ15517 529 aa6.83□□□□□ -1.32
TRPM1-208ENST00000558768 ZNF575Q86XF7 245 aa6.83□□□□□ -1.32
TRPM1-208ENST00000558768 FAM218AQ96MZ4 157 aa6.83□□□□□ -1.32
TRPM1-208ENST00000558768 LITAFQ99732 161 aa6.83□□□□□ -1.32
TRPM1-208ENST00000558768 SMCR5Q8TEV8 140 aa6.83□□□□□ -1.32
TRPM1-208ENST00000558768 C11orf45Q8TAV5 145 aa6.82□□□□□ -1.32
TRPM1-208ENST00000558768 REG3GQ6UW15 175 aa6.82□□□□□ -1.32
TRPM1-208ENST00000558768 COA5Q86WW8 74 aa6.82□□□□□ -1.32
TRPM1-208ENST00000558768 TLN2Q9Y4G6 2542 aa6.82□□□□□ -1.32
TRPM1-208ENST00000558768 A8MTW9 85 aa6.81□□□□□ -1.32
TRPM1-208ENST00000558768 EIF4EBP3O60516 100 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms