RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 BAGE3Q86Y29 109 aa8.7□□□□□ -1.02
TSPAN3-205ENST00000558745 FAM19A2Q8N3H0 131 aa8.7□□□□□ -1.02
TSPAN3-205ENST00000558745 NUPR1O60356 82 aa8.69□□□□□ -1.02
TSPAN3-205ENST00000558745 SPINK8P0C7L1 97 aa8.69□□□□□ -1.02
TSPAN3-205ENST00000558745 HNRNPA3P51991 378 aaKnown RBP8.69□□□□□ -1.02
TSPAN3-205ENST00000558745 RNF151Q2KHN1 245 aa8.69□□□□□ -1.02
TSPAN3-205ENST00000558745 C6orf226Q5I0X4 101 aa8.69□□□□□ -1.02
TSPAN3-205ENST00000558745 Q6ZRP5 223 aa8.69□□□□□ -1.02
TSPAN3-205ENST00000558745 CHCHD1Q96BP2 118 aaKnown RBP8.69□□□□□ -1.02
TSPAN3-205ENST00000558745 PACRGQ96M98 296 aaPredicted RBP8.69□□□□□ -1.02
TSPAN3-205ENST00000558745 IGLV5-45A0A087WSX0 123 aa8.68□□□□□ -1.02
TSPAN3-205ENST00000558745 SMIM1B2RUZ4 78 aa8.68□□□□□ -1.02
TSPAN3-205ENST00000558745 F8WDY8 70 aa8.68□□□□□ -1.02
TSPAN3-205ENST00000558745 PRSS2P07478 247 aa8.68□□□□□ -1.02
TSPAN3-205ENST00000558745 LINC00310P59036 64 aa8.68□□□□□ -1.02
TSPAN3-205ENST00000558745 GAGE2EQ4V326 116 aa8.68□□□□□ -1.02
TSPAN3-205ENST00000558745 GAGE2DQ9UEU5 116 aa8.68□□□□□ -1.02
TSPAN3-205ENST00000558745 PKHD1L1Q86WI1 4243 aa8.66□□□□□ -1.02
TSPAN3-205ENST00000558745 SERF1AO75920 110 aa8.66□□□□□ -1.02
TSPAN3-205ENST00000558745 ATP5LO75964 103 aa8.66□□□□□ -1.02
TSPAN3-205ENST00000558745 IGLC3P0DOY3 106 aa8.66□□□□□ -1.02
TSPAN3-205ENST00000558745 CKS1BP61024 79 aa8.66□□□□□ -1.02
TSPAN3-205ENST00000558745 Q8IZM0 81 aa8.66□□□□□ -1.02
TSPAN3-205ENST00000558745 LINC00474Q9P2X8 69 aa8.66□□□□□ -1.02
TSPAN3-205ENST00000558745 FAM168BA1KXE4 195 aa8.65□□□□□ -1.02
TSPAN3-205ENST00000558745 HSBP1O75506 76 aa8.65□□□□□ -1.02
TSPAN3-205ENST00000558745 COX7B2Q8TF08 81 aa8.65□□□□□ -1.02
TSPAN3-205ENST00000558745 PKIGQ9Y2B9 76 aa8.65□□□□□ -1.02
TSPAN3-205ENST00000558745 TRBV30A0A0K0K1B3 111 aa8.64□□□□□ -1.03
TSPAN3-205ENST00000558745 C11orf86A6NJI1 115 aa8.64□□□□□ -1.03
TSPAN3-205ENST00000558745 TLX1NBP0CAT3 122 aa8.64□□□□□ -1.03
TSPAN3-205ENST00000558745 ZNF22P17026 224 aaPredicted RBP8.64□□□□□ -1.03
TSPAN3-205ENST00000558745 IFI27L1Q96BM0 104 aa8.64□□□□□ -1.03
TSPAN3-205ENST00000558745 LRP1Q07954 4544 aaKnown RBP8.64□□□□□ -1.03
TSPAN3-205ENST00000558745 HMCN2Q8NDA2 5059 aa8.63□□□□□ -1.03
TSPAN3-205ENST00000558745 J3QL48 77 aa8.63□□□□□ -1.03
TSPAN3-205ENST00000558745 PHF5AQ7RTV0 110 aaKnown RBP8.63□□□□□ -1.03
TSPAN3-205ENST00000558745 CHTOPQ9Y3Y2 248 aaKnown RBP8.63□□□□□ -1.03
TSPAN3-205ENST00000558745 KRTAP7-1Q8IUC3 87 aa8.62□□□□□ -1.03
TSPAN3-205ENST00000558745 C7orf33Q8WU49 177 aa8.62□□□□□ -1.03
TSPAN3-205ENST00000558745 FAT3Q8TDW7 4589 aa8.61□□□□□ -1.03
TSPAN3-205ENST00000558745 NDUFC2-KCTD14E9PQ53 114 aa8.61□□□□□ -1.03
TSPAN3-205ENST00000558745 H0Y8G0 127 aa8.61□□□□□ -1.03
TSPAN3-205ENST00000558745 H3BRM9 83 aa8.61□□□□□ -1.03
TSPAN3-205ENST00000558745 C9orf129Q5T035 196 aaKnown RBP8.61□□□□□ -1.03
TSPAN3-205ENST00000558745 F8VRH5 84 aa8.6□□□□□ -1.03
TSPAN3-205ENST00000558745 FABP4P15090 132 aa8.6□□□□□ -1.03
TSPAN3-205ENST00000558745 TMEM170BQ5T4T1 132 aa8.6□□□□□ -1.03
TSPAN3-205ENST00000558745 FAM19A5Q7Z5A7 132 aaPredicted RBP8.6□□□□□ -1.03
TSPAN3-205ENST00000558745 TRAV12-1A0A0B4J245 112 aa8.59□□□□□ -1.03
TSPAN3-205ENST00000558745 KRTAP11-1Q8IUC1 163 aa8.59□□□□□ -1.03
TSPAN3-205ENST00000558745 XAGE1AQ9HD64 81 aa8.59□□□□□ -1.03
TSPAN3-205ENST00000558745 IGLV5-39A0A0G2JS06 123 aa8.58□□□□□ -1.04
TSPAN3-205ENST00000558745 HIST1H2BKO60814 126 aa8.58□□□□□ -1.04
TSPAN3-205ENST00000558745 LEPROTL1O95214 131 aa8.58□□□□□ -1.04
TSPAN3-205ENST00000558745 HIST1H2BJP06899 126 aa8.58□□□□□ -1.04
TSPAN3-205ENST00000558745 HIST1H2BOP23527 126 aa8.58□□□□□ -1.04
TSPAN3-205ENST00000558745 HIST1H2BBP33778 126 aa8.58□□□□□ -1.04
TSPAN3-205ENST00000558745 HIST1H2BDP58876 126 aa8.58□□□□□ -1.04
TSPAN3-205ENST00000558745 HIST1H2BCP62807 126 aa8.58□□□□□ -1.04
TSPAN3-205ENST00000558745 HIST2H2BEQ16778 126 aa8.58□□□□□ -1.04
TSPAN3-205ENST00000558745 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.58□□□□□ -1.04
TSPAN3-205ENST00000558745 SERTAD4-AS1Q5TG53 156 aa8.58□□□□□ -1.04
TSPAN3-205ENST00000558745 HIST1H2BHQ93079 126 aa8.58□□□□□ -1.04
TSPAN3-205ENST00000558745 HIST1H2BNQ99877 126 aa8.58□□□□□ -1.04
TSPAN3-205ENST00000558745 HIST1H2BMQ99879 126 aa8.58□□□□□ -1.04
TSPAN3-205ENST00000558745 CXCL5P42830 114 aa8.57□□□□□ -1.04
TSPAN3-205ENST00000558745 PRR3P79522 188 aaKnown RBP8.57□□□□□ -1.04
TSPAN3-205ENST00000558745 ZNF625Q96I27 306 aaPredicted RBP8.56□□□□□ -1.04
TSPAN3-205ENST00000558745 PMCHL2Q9BQD1 86 aa8.56□□□□□ -1.04
TSPAN3-205ENST00000558745 TMEM223A0PJW6 202 aa8.55□□□□□ -1.04
TSPAN3-205ENST00000558745 ODF1Q14990 250 aa8.55□□□□□ -1.04
TSPAN3-205ENST00000558745 PSORS1C2Q9UIG4 136 aa8.54□□□□□ -1.04
TSPAN3-205ENST00000558745 PFN2P35080 140 aa8.54□□□□□ -1.04
TSPAN3-205ENST00000558745 KRTAP29-1A8MX34 341 aaPredicted RBP8.53□□□□□ -1.04
TSPAN3-205ENST00000558745 M0QXV9 152 aa8.53□□□□□ -1.04
TSPAN3-205ENST00000558745 ATP6V1G1O75348 118 aa8.52□□□□□ -1.05
TSPAN3-205ENST00000558745 C1orf137Q5JT78 98 aa8.52□□□□□ -1.05
TSPAN3-205ENST00000558745 HSPB8Q9UJY1 196 aa8.52□□□□□ -1.05
TSPAN3-205ENST00000558745 C22orf24Q9Y442 160 aa8.52□□□□□ -1.05
TSPAN3-205ENST00000558745 SRSF9Q13242 221 aaKnown RBP eCLIP8.51□□□□□ -1.05
TSPAN3-205ENST00000558745 ERG28Q9UKR5 140 aa8.51□□□□□ -1.05
TSPAN3-205ENST00000558745 A0A0U1RRA0 63 aa8.5□□□□□ -1.05
TSPAN3-205ENST00000558745 UBE2BP63146 152 aa8.5□□□□□ -1.05
TSPAN3-205ENST00000558745 S100A1P23297 94 aa8.49□□□□□ -1.05
TSPAN3-205ENST00000558745 OXTP01178 125 aa8.48□□□□□ -1.05
TSPAN3-205ENST00000558745 TSPEAR-AS2P59090 65 aa8.48□□□□□ -1.05
TSPAN3-205ENST00000558745 MAP1LC3CQ9BXW4 147 aa8.48□□□□□ -1.05
TSPAN3-205ENST00000558745 GAGE10A6NGK3 116 aa8.47□□□□□ -1.05
TSPAN3-205ENST00000558745 DPM2O94777 84 aa8.47□□□□□ -1.05
TSPAN3-205ENST00000558745 SND1-IT1Q9HBX3 110 aa8.47□□□□□ -1.05
TSPAN3-205ENST00000558745 PLA2G2DQ9UNK4 145 aa8.47□□□□□ -1.05
TSPAN3-205ENST00000558745 SYS1-DBNDD2H3BUS1 97 aa8.46□□□□□ -1.06
TSPAN3-205ENST00000558745 IGKCP01834 107 aa8.46□□□□□ -1.06
TSPAN3-205ENST00000558745 LINC00158P58513 81 aa8.46□□□□□ -1.06
TSPAN3-205ENST00000558745 SPINK6Q6UWN8 80 aa8.46□□□□□ -1.06
TSPAN3-205ENST00000558745 Q8NDZ9 215 aa8.46□□□□□ -1.06
TSPAN3-205ENST00000558745 LINC00167Q96N53 147 aa8.46□□□□□ -1.06
TSPAN3-205ENST00000558745 RPL37AP8A6NKH3 93 aa8.45□□□□□ -1.06
TSPAN3-205ENST00000558745 IGLV7-43P04211 117 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms