RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 LINC00242Q5T6M2 205 aa6.7□□□□□ -1.34
SMAD3-206ENST00000558739 UNQ6190/PRO20217Q6UXQ8 127 aa6.7□□□□□ -1.34
SMAD3-206ENST00000558739 Q6ZUT4 128 aa6.7□□□□□ -1.34
SMAD3-206ENST00000558739 SPANXA1Q9NS26 97 aa6.7□□□□□ -1.34
SMAD3-206ENST00000558739 TLX1NBP0CAT3 122 aa6.69□□□□□ -1.34
SMAD3-206ENST00000558739 SEC61BP60468 96 aaKnown RBP6.69□□□□□ -1.34
SMAD3-206ENST00000558739 C10orf91Q5T1B1 145 aa6.69□□□□□ -1.34
SMAD3-206ENST00000558739 PYGO1Q9Y3Y4 419 aa6.69□□□□□ -1.34
SMAD3-206ENST00000558739 TRAV9-1A0A075B6T8 112 aa6.68□□□□□ -1.34
SMAD3-206ENST00000558739 ORAOV1Q8WV07 137 aa6.68□□□□□ -1.34
SMAD3-206ENST00000558739 TRAV13-1A0A0B4J241 112 aa6.67□□□□□ -1.34
SMAD3-206ENST00000558739 RAB5AP20339 215 aa6.67□□□□□ -1.34
SMAD3-206ENST00000558739 Q8N8P6 123 aa6.67□□□□□ -1.34
SMAD3-206ENST00000558739 MAP1LC3AQ9H492 121 aa6.67□□□□□ -1.34
SMAD3-206ENST00000558739 K7EMI3 77 aa6.66□□□□□ -1.34
SMAD3-206ENST00000558739 COMMD7Q86VX2 200 aa6.66□□□□□ -1.34
SMAD3-206ENST00000558739 IGLV4-3A0A075B6K6 122 aa6.65□□□□□ -1.34
SMAD3-206ENST00000558739 IGHV3OR16-9A0A0B4J2B5 98 aa6.65□□□□□ -1.34
SMAD3-206ENST00000558739 NDUFA1O15239 70 aa6.65□□□□□ -1.34
SMAD3-206ENST00000558739 RPL28P46779 137 aaKnown RBP6.65□□□□□ -1.34
SMAD3-206ENST00000558739 OR10D4PQ8NGN7 298 aa6.65□□□□□ -1.34
SMAD3-206ENST00000558739 LOC389332A0A1B0GUA5 103 aa6.64□□□□□ -1.35
SMAD3-206ENST00000558739 NUPR1O60356 82 aa6.64□□□□□ -1.35
SMAD3-206ENST00000558739 NPSP0C0P6 89 aa6.64□□□□□ -1.35
SMAD3-206ENST00000558739 IFI27P40305 119 aaPredicted RBP6.64□□□□□ -1.35
SMAD3-206ENST00000558739 GNB1LQ9BYB4 327 aa6.64□□□□□ -1.35
SMAD3-206ENST00000558739 NXT2Q9NPJ8 142 aaKnown RBP6.64□□□□□ -1.35
SMAD3-206ENST00000558739 IFITM10A6NMD0 228 aa6.63□□□□□ -1.35
SMAD3-206ENST00000558739 BCE1O60756 84 aa6.63□□□□□ -1.35
SMAD3-206ENST00000558739 ORMDL2Q53FV1 153 aa6.63□□□□□ -1.35
SMAD3-206ENST00000558739 C2orf66Q6UXQ4 117 aa6.63□□□□□ -1.35
SMAD3-206ENST00000558739 FP248Q71RG6 208 aaPredicted RBP6.63□□□□□ -1.35
SMAD3-206ENST00000558739 LINC01546A6NGU7 62 aa6.62□□□□□ -1.35
SMAD3-206ENST00000558739 IGIPA6NJ69 53 aa6.62□□□□□ -1.35
SMAD3-206ENST00000558739 S100PP25815 95 aa6.62□□□□□ -1.35
SMAD3-206ENST00000558739 RHEBQ15382 184 aa6.62□□□□□ -1.35
SMAD3-206ENST00000558739 KIAA1644Q3SXP7 199 aa6.62□□□□□ -1.35
SMAD3-206ENST00000558739 COX19Q49B96 90 aa6.62□□□□□ -1.35
SMAD3-206ENST00000558739 FAM19A3Q7Z5A8 133 aa6.62□□□□□ -1.35
SMAD3-206ENST00000558739 C3orf22Q8N5N4 141 aa6.62□□□□□ -1.35
SMAD3-206ENST00000558739 TMEM141Q96I45 108 aa6.62□□□□□ -1.35
SMAD3-206ENST00000558739 AMELXQ99217 191 aa6.62□□□□□ -1.35
SMAD3-206ENST00000558739 CYSLTR1Q9Y271 337 aa6.62□□□□□ -1.35
SMAD3-206ENST00000558739 C22orf24Q9Y442 160 aa6.62□□□□□ -1.35
SMAD3-206ENST00000558739 F8WDY8 70 aa6.61□□□□□ -1.35
SMAD3-206ENST00000558739 M0R2T5 61 aa6.61□□□□□ -1.35
SMAD3-206ENST00000558739 FAM229BQ4G0N7 80 aa6.61□□□□□ -1.35
SMAD3-206ENST00000558739 C2orf82Q6UX34 121 aa6.61□□□□□ -1.35
SMAD3-206ENST00000558739 LINC00469Q8N7U9 141 aa6.61□□□□□ -1.35
SMAD3-206ENST00000558739 ALKBH7Q9BT30 221 aaPredicted RBP6.61□□□□□ -1.35
SMAD3-206ENST00000558739 IGKV2D-26A0A0A0MRZ7 120 aa6.6□□□□□ -1.35
SMAD3-206ENST00000558739 NDUFC2-KCTD14E9PQ53 114 aa6.6□□□□□ -1.35
SMAD3-206ENST00000558739 TEX43Q6ZNM6 134 aa6.6□□□□□ -1.35
SMAD3-206ENST00000558739 KRTAP13-1Q8IUC0 172 aa6.6□□□□□ -1.35
SMAD3-206ENST00000558739 LINC01561Q8N1V8 128 aa6.6□□□□□ -1.35
SMAD3-206ENST00000558739 RPS10P5Q9NQ39 176 aa6.6□□□□□ -1.35
SMAD3-206ENST00000558739 TGIF2-C20orf24A0A0A6YYL0 155 aa6.59□□□□□ -1.35
SMAD3-206ENST00000558739 G0S2P27469 103 aa6.59□□□□□ -1.35
SMAD3-206ENST00000558739 KIAA0087Q14695 138 aa6.59□□□□□ -1.35
SMAD3-206ENST00000558739 TOMM6Q96B49 74 aa6.59□□□□□ -1.35
SMAD3-206ENST00000558739 TIMM17AQ99595 171 aa6.59□□□□□ -1.35
SMAD3-206ENST00000558739 XAGE1AQ9HD64 81 aa6.58□□□□□ -1.36
SMAD3-206ENST00000558739 LINC01549A6NIU2 74 aa6.57□□□□□ -1.36
SMAD3-206ENST00000558739 RPL37AP8A6NKH3 93 aa6.57□□□□□ -1.36
SMAD3-206ENST00000558739 XP32Q5T750 250 aa6.57□□□□□ -1.36
SMAD3-206ENST00000558739 ZC2HC1BQ5TFG8 222 aa6.57□□□□□ -1.36
SMAD3-206ENST00000558739 Q6ZN92 141 aa6.57□□□□□ -1.36
SMAD3-206ENST00000558739 C2orf88Q9BSF0 95 aa6.57□□□□□ -1.36
SMAD3-206ENST00000558739 MRPL18Q9H0U6 180 aaKnown RBP6.57□□□□□ -1.36
SMAD3-206ENST00000558739 VCX2Q9H322 139 aa6.57□□□□□ -1.36
SMAD3-206ENST00000558739 PAPPA-AS1Q5QFB9 102 aa6.56□□□□□ -1.36
SMAD3-206ENST00000558739 ERASQ7Z444 233 aa6.56□□□□□ -1.36
SMAD3-206ENST00000558739 KRTAP4-16G5E9R7 235 aaPredicted RBP6.55□□□□□ -1.36
SMAD3-206ENST00000558739 APOC3P02656 99 aa6.55□□□□□ -1.36
SMAD3-206ENST00000558739 FABP9Q0Z7S8 132 aa6.55□□□□□ -1.36
SMAD3-206ENST00000558739 MRPL55Q7Z7F7 128 aaKnown RBP6.55□□□□□ -1.36
SMAD3-206ENST00000558739 SVBPQ8N300 66 aa6.55□□□□□ -1.36
SMAD3-206ENST00000558739 TRBV30A0A0K0K1B3 111 aa6.54□□□□□ -1.36
SMAD3-206ENST00000558739 GAGE10A6NGK3 116 aa6.54□□□□□ -1.36
SMAD3-206ENST00000558739 SNAPINO95295 136 aa6.54□□□□□ -1.36
SMAD3-206ENST00000558739 HERVK_113P63121 156 aa6.54□□□□□ -1.36
SMAD3-206ENST00000558739 SEC11AP67812 179 aa6.54□□□□□ -1.36
SMAD3-206ENST00000558739 CTAG1AP78358 180 aa6.54□□□□□ -1.36
SMAD3-206ENST00000558739 YPEL4Q96NS1 127 aa6.54□□□□□ -1.36
SMAD3-206ENST00000558739 UBE2AP49459 152 aa6.53□□□□□ -1.36
SMAD3-206ENST00000558739 LBHQ53QV2 105 aaPredicted RBP6.53□□□□□ -1.36
SMAD3-206ENST00000558739 URB1-AS1Q96HZ7 61 aa6.53□□□□□ -1.36
SMAD3-206ENST00000558739 PACRGQ96M98 296 aaPredicted RBP6.53□□□□□ -1.36
SMAD3-206ENST00000558739 SCGB3A1Q96QR1 104 aa6.53□□□□□ -1.36
SMAD3-206ENST00000558739 CDKN2A-AS1Q9UH64 79 aa6.53□□□□□ -1.36
SMAD3-206ENST00000558739 IGLV5-45A0A087WSX0 123 aa6.52□□□□□ -1.37
SMAD3-206ENST00000558739 A0A096LNJ9 63 aa6.52□□□□□ -1.37
SMAD3-206ENST00000558739 PRLHP81277 87 aa6.52□□□□□ -1.37
SMAD3-206ENST00000558739 NDUFA5Q16718 116 aa6.52□□□□□ -1.37
SMAD3-206ENST00000558739 FA2HQ7L5A8 372 aa6.52□□□□□ -1.37
SMAD3-206ENST00000558739 Q8IZM0 81 aa6.52□□□□□ -1.37
SMAD3-206ENST00000558739 C18orf32Q8TCD1 76 aa6.52□□□□□ -1.37
SMAD3-206ENST00000558739 LINC00167Q96N53 147 aa6.52□□□□□ -1.37
SMAD3-206ENST00000558739 TRAPPC1Q9Y5R8 145 aa6.52□□□□□ -1.37
SMAD3-206ENST00000558739 IGLV8-61A0A075B6I0 122 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms