RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 C16orf74Q96GX8 76 aa11.18□□□□□ -0.62
HMBOX1-212ENST00000558662 A0A0U1RQV1 116 aa11.17□□□□□ -0.62
HMBOX1-212ENST00000558662 IGHV4-31P0DP07 118 aa11.17□□□□□ -0.62
HMBOX1-212ENST00000558662 ATMQ13315 3056 aa11.16□□□□□ -0.62
HMBOX1-212ENST00000558662 FUSP35637 526 aaKnown RBP eCLIP11.16□□□□□ -0.62
HMBOX1-212ENST00000558662 CMC4P56277 68 aaPredicted RBP11.16□□□□□ -0.62
HMBOX1-212ENST00000558662 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.16□□□□□ -0.62
HMBOX1-212ENST00000558662 LAMA5O15230 3695 aa11.16□□□□□ -0.62
HMBOX1-212ENST00000558662 PLA2G2AP14555 144 aa11.16□□□□□ -0.62
HMBOX1-212ENST00000558662 C10orf99Q6UWK7 81 aa11.16□□□□□ -0.62
HMBOX1-212ENST00000558662 SORL1Q92673 2214 aa11.15□□□□□ -0.62
HMBOX1-212ENST00000558662 CCL24O00175 119 aa11.15□□□□□ -0.62
HMBOX1-212ENST00000558662 RNASE1P07998 156 aaKnown RBP11.15□□□□□ -0.62
HMBOX1-212ENST00000558662 DEFB114Q30KQ6 69 aa11.15□□□□□ -0.62
HMBOX1-212ENST00000558662 NCOR2Q9Y618 2525 aa11.14□□□□□ -0.63
HMBOX1-212ENST00000558662 BOD1L1Q8NFC6 3051 aa11.14□□□□□ -0.63
HMBOX1-212ENST00000558662 ABCA2Q9BZC7 2435 aa11.14□□□□□ -0.63
HMBOX1-212ENST00000558662 IGHV4-30-2A0A087WSY4 118 aa11.14□□□□□ -0.63
HMBOX1-212ENST00000558662 IGKV3OR2-268A0A0C4DH90 116 aa11.13□□□□□ -0.63
HMBOX1-212ENST00000558662 B4DSR2 109 aa11.13□□□□□ -0.63
HMBOX1-212ENST00000558662 GNLYP22749 145 aa11.13□□□□□ -0.63
HMBOX1-212ENST00000558662 SLURP1P55000 103 aa11.13□□□□□ -0.63
HMBOX1-212ENST00000558662 Q6ZRU5 148 aa11.13□□□□□ -0.63
HMBOX1-212ENST00000558662 SPATA3Q8NHX4 192 aa11.13□□□□□ -0.63
HMBOX1-212ENST00000558662 TLN1Q9Y490 2541 aaKnown RBP11.12□□□□□ -0.63
HMBOX1-212ENST00000558662 TRGV4A0A0C4DH28 118 aa11.12□□□□□ -0.63
HMBOX1-212ENST00000558662 C4orf3Q8WVX3 66 aa11.12□□□□□ -0.63
HMBOX1-212ENST00000558662 TRGV2A0A075B6R0 118 aa11.11□□□□□ -0.63
HMBOX1-212ENST00000558662 Q6ZTC4 211 aa11.11□□□□□ -0.63
HMBOX1-212ENST00000558662 IGLV6-57P01721 117 aa11.11□□□□□ -0.63
HMBOX1-212ENST00000558662 OCR1Q9BZK8 76 aa11.11□□□□□ -0.63
HMBOX1-212ENST00000558662 NOP10Q9NPE3 64 aaKnown RBP11.11□□□□□ -0.63
HMBOX1-212ENST00000558662 DCHS2Q6V1P9 2916 aa11.1□□□□□ -0.63
HMBOX1-212ENST00000558662 COX7BP24311 80 aa11.1□□□□□ -0.63
HMBOX1-212ENST00000558662 Q1T7F1 81 aa11.1□□□□□ -0.63
HMBOX1-212ENST00000558662 DEFB112Q30KQ8 113 aa11.1□□□□□ -0.63
HMBOX1-212ENST00000558662 ZNF843Q8N446 348 aa11.1□□□□□ -0.63
HMBOX1-212ENST00000558662 ZNF702PQ9H963 129 aa11.1□□□□□ -0.63
HMBOX1-212ENST00000558662 KIAA0087Q14695 138 aa11.09□□□□□ -0.63
HMBOX1-212ENST00000558662 CSMD1Q96PZ7 3565 aa11.08□□□□□ -0.63
HMBOX1-212ENST00000558662 ODF3L2Q3SX64 289 aa11.08□□□□□ -0.64
HMBOX1-212ENST00000558662 CD164L2Q6UWJ8 174 aa11.08□□□□□ -0.64
HMBOX1-212ENST00000558662 LOC100131303A0A0U1RQF7 123 aa11.08□□□□□ -0.64
HMBOX1-212ENST00000558662 M0R2N4 97 aa11.08□□□□□ -0.64
HMBOX1-212ENST00000558662 PMAIP1Q13794 54 aa11.08□□□□□ -0.64
HMBOX1-212ENST00000558662 Q6ZQY7 126 aa11.08□□□□□ -0.64
HMBOX1-212ENST00000558662 A0A1B0GW54 56 aa11.07□□□□□ -0.64
HMBOX1-212ENST00000558662 PRR3P79522 188 aaKnown RBP11.07□□□□□ -0.64
HMBOX1-212ENST00000558662 DSCR9P59020 149 aa11.06□□□□□ -0.64
HMBOX1-212ENST00000558662 MPLKIPQ8TAP9 179 aa11.06□□□□□ -0.64
HMBOX1-212ENST00000558662 ESM1Q9NQ30 184 aa11.06□□□□□ -0.64
HMBOX1-212ENST00000558662 FAM229BQ4G0N7 80 aa11.05□□□□□ -0.64
HMBOX1-212ENST00000558662 CHD8Q9HCK8 2581 aa11.05□□□□□ -0.64
HMBOX1-212ENST00000558662 HRNRQ86YZ3 2850 aaPredicted RBP11.05□□□□□ -0.64
HMBOX1-212ENST00000558662 DIRC1Q969H9 104 aa11.05□□□□□ -0.64
HMBOX1-212ENST00000558662 LRBAP50851 2863 aa11.05□□□□□ -0.64
HMBOX1-212ENST00000558662 IGKV4-1P06312 121 aa11.04□□□□□ -0.64
HMBOX1-212ENST00000558662 LCE6AA0A183 80 aa11.03□□□□□ -0.64
HMBOX1-212ENST00000558662 hDV103S1A0JD37 113 aa11.03□□□□□ -0.64
HMBOX1-212ENST00000558662 CCL19Q99731 98 aa11.02□□□□□ -0.65
HMBOX1-212ENST00000558662 A0A0J9YWU9 116 aa11.01□□□□□ -0.65
HMBOX1-212ENST00000558662 IGHV4-30-4P0DP06 118 aa11.01□□□□□ -0.65
HMBOX1-212ENST00000558662 ITPR1Q14643 2758 aa11.01□□□□□ -0.65
HMBOX1-212ENST00000558662 Q6YL49 198 aa11□□□□□ -0.65
HMBOX1-212ENST00000558662 PKD1L2Q7Z442 2459 aa11□□□□□ -0.65
HMBOX1-212ENST00000558662 CELA1Q9UNI1 258 aa11□□□□□ -0.65
HMBOX1-212ENST00000558662 ATRXP46100 2492 aa10.99□□□□□ -0.65
HMBOX1-212ENST00000558662 SPTAN1Q13813 2472 aaKnown RBP10.99□□□□□ -0.65
HMBOX1-212ENST00000558662 GVQW2A0A096LPI5 108 aaPredicted RBP10.99□□□□□ -0.65
HMBOX1-212ENST00000558662 DEFB136Q30KP8 78 aa10.99□□□□□ -0.65
HMBOX1-212ENST00000558662 LINC01356Q8N9X3 169 aa10.99□□□□□ -0.65
HMBOX1-212ENST00000558662 C19orf84I3L1E1 186 aa10.98□□□□□ -0.65
HMBOX1-212ENST00000558662 ELOF1P60002 83 aaKnown RBP10.98□□□□□ -0.65
HMBOX1-212ENST00000558662 SPTA1P02549 2419 aa10.97□□□□□ -0.65
HMBOX1-212ENST00000558662 LYRM9A8MSI8 78 aa10.97□□□□□ -0.65
HMBOX1-212ENST00000558662 SCXQ7RTU7 201 aa10.97□□□□□ -0.65
HMBOX1-212ENST00000558662 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.96□□□□□ -0.652e-6■■□□□ 14.1
HMBOX1-212ENST00000558662 CHCHD10Q8WYQ3 142 aaPredicted RBP10.95□□□□□ -0.66
HMBOX1-212ENST00000558662 BBC3Q96PG8 261 aaPredicted RBP10.95□□□□□ -0.66
HMBOX1-212ENST00000558662 CYP4F30PQ9H0H9 118 aa10.95□□□□□ -0.66
HMBOX1-212ENST00000558662 CD164Q04900 197 aa10.95□□□□□ -0.66
HMBOX1-212ENST00000558662 C18orf65Q6ZTR6 163 aa10.95□□□□□ -0.66
HMBOX1-212ENST00000558662 LINC00612Q8N6U2 182 aa10.95□□□□□ -0.66
HMBOX1-212ENST00000558662 Q8NDZ9 215 aa10.95□□□□□ -0.66
HMBOX1-212ENST00000558662 ZNF73O43830 326 aaPredicted RBP10.94□□□□□ -0.66
HMBOX1-212ENST00000558662 FSHBP01225 129 aa10.94□□□□□ -0.66
HMBOX1-212ENST00000558662 GIG44P09565 113 aaPredicted RBP10.94□□□□□ -0.66
HMBOX1-212ENST00000558662 KHDC1LQ5JSQ8 128 aa10.94□□□□□ -0.66
HMBOX1-212ENST00000558662 HIGD2BQ4VC39 106 aa10.93□□□□□ -0.66
HMBOX1-212ENST00000558662 HIGD2AQ9BW72 106 aa10.93□□□□□ -0.66
HMBOX1-212ENST00000558662 LINC00269Q8N2A0 174 aa10.92□□□□□ -0.66
HMBOX1-212ENST00000558662 DAD1P61803 113 aa10.91□□□□□ -0.66
HMBOX1-212ENST00000558662 CSNK1G2-AS1Q8NCQ2 148 aa10.91□□□□□ -0.66
HMBOX1-212ENST00000558662 GYPEP15421 78 aa10.9□□□□□ -0.66
HMBOX1-212ENST00000558662 ACACBO00763 2458 aa10.9□□□□□ -0.66
HMBOX1-212ENST00000558662 Q6ZRP5 223 aa10.9□□□□□ -0.67
HMBOX1-212ENST00000558662 ZCCHC13Q8WW36 166 aaKnown RBP10.9□□□□□ -0.67
HMBOX1-212ENST00000558662 AKAP6Q13023 2319 aa10.89□□□□□ -0.67
HMBOX1-212ENST00000558662 NDUFB1O75438 58 aa10.89□□□□□ -0.67
HMBOX1-212ENST00000558662 SPAG11BQ08648 103 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms