RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 A0A1W2PNN7 141 aa9.64□□□□□ -0.87
CSHL1-208ENST00000558609 IGIPA6NJ69 53 aa9.64□□□□□ -0.87
CSHL1-208ENST00000558609 MT1HL1P0DM35 61 aa9.64□□□□□ -0.87
CSHL1-208ENST00000558609 Q6ZN92 141 aa9.64□□□□□ -0.87
CSHL1-208ENST00000558609 HIST3H2BBQ8N257 126 aa9.64□□□□□ -0.87
CSHL1-208ENST00000558609 AMELXQ99217 191 aa9.64□□□□□ -0.87
CSHL1-208ENST00000558609 C2orf88Q9BSF0 95 aa9.64□□□□□ -0.87
CSHL1-208ENST00000558609 NUPR1O60356 82 aa9.63□□□□□ -0.87
CSHL1-208ENST00000558609 FABP4P15090 132 aa9.63□□□□□ -0.87
CSHL1-208ENST00000558609 G0S2P27469 103 aa9.63□□□□□ -0.87
CSHL1-208ENST00000558609 RPL18AQ02543 176 aaKnown RBP9.63□□□□□ -0.87
CSHL1-208ENST00000558609 KIAA0087Q14695 138 aa9.63□□□□□ -0.87
CSHL1-208ENST00000558609 C10orf25Q5T742 122 aa9.63□□□□□ -0.87
CSHL1-208ENST00000558609 UNQ6190/PRO20217Q6UXQ8 127 aa9.63□□□□□ -0.87
CSHL1-208ENST00000558609 Q6ZRP5 223 aa9.63□□□□□ -0.87
CSHL1-208ENST00000558609 LINC00173Q6ZV60 143 aa9.63□□□□□ -0.87
CSHL1-208ENST00000558609 LINC01561Q8N1V8 128 aa9.63□□□□□ -0.87
CSHL1-208ENST00000558609 VCX2Q9H322 139 aa9.63□□□□□ -0.87
CSHL1-208ENST00000558609 LOC105371267A0A1B0GV96 52 aa9.62□□□□□ -0.87
CSHL1-208ENST00000558609 TLX1NBP0CAT3 122 aa9.62□□□□□ -0.87
CSHL1-208ENST00000558609 C9orf116Q5BN46 136 aaPredicted RBP9.62□□□□□ -0.87
CSHL1-208ENST00000558609 RNF213Q63HN8 5207 aa9.62□□□□□ -0.87
CSHL1-208ENST00000558609 ZC2HC1BQ5TFG8 222 aa9.61□□□□□ -0.87
CSHL1-208ENST00000558609 FAM19A3Q7Z5A8 133 aa9.61□□□□□ -0.87
CSHL1-208ENST00000558609 FAM19A2Q8N3H0 131 aa9.61□□□□□ -0.87
CSHL1-208ENST00000558609 C6orf48Q9UBA6 75 aa9.61□□□□□ -0.87
CSHL1-208ENST00000558609 SPINK6Q6UWN8 80 aa9.6□□□□□ -0.87
CSHL1-208ENST00000558609 TOMM6Q96B49 74 aa9.6□□□□□ -0.87
CSHL1-208ENST00000558609 SRSF9Q13242 221 aaKnown RBP eCLIP9.59□□□□□ -0.87
CSHL1-208ENST00000558609 PMCHL1Q16048 86 aa9.59□□□□□ -0.87
CSHL1-208ENST00000558609 PAPPA-AS1Q5QFB9 102 aa9.59□□□□□ -0.87
CSHL1-208ENST00000558609 URB1-AS1Q96HZ7 61 aa9.59□□□□□ -0.87
CSHL1-208ENST00000558609 TIMM17AQ99595 171 aa9.59□□□□□ -0.87
CSHL1-208ENST00000558609 HIST1H2BLQ99880 126 aa9.59□□□□□ -0.87
CSHL1-208ENST00000558609 TRBV30A0A0K0K1B3 111 aa9.58□□□□□ -0.88
CSHL1-208ENST00000558609 LINC00310P59036 64 aa9.58□□□□□ -0.88
CSHL1-208ENST00000558609 PACRGQ96M98 296 aaPredicted RBP9.58□□□□□ -0.88
CSHL1-208ENST00000558609 LINC01600Q96MT4 127 aa9.58□□□□□ -0.88
CSHL1-208ENST00000558609 LRP2P98164 4655 aa9.57□□□□□ -0.88
CSHL1-208ENST00000558609 LEPROTL1O95214 131 aa9.57□□□□□ -0.88
CSHL1-208ENST00000558609 SEC11AP67812 179 aa9.57□□□□□ -0.88
CSHL1-208ENST00000558609 LINC01546A6NGU7 62 aa9.56□□□□□ -0.88
CSHL1-208ENST00000558609 HBDP02042 147 aa9.56□□□□□ -0.88
CSHL1-208ENST00000558609 C2orf82Q6UX34 121 aa9.56□□□□□ -0.88
CSHL1-208ENST00000558609 PHF5AQ7RTV0 110 aaKnown RBP9.56□□□□□ -0.88
CSHL1-208ENST00000558609 ERASQ7Z444 233 aa9.56□□□□□ -0.88
CSHL1-208ENST00000558609 HSPB8Q9UJY1 196 aa9.56□□□□□ -0.88
CSHL1-208ENST00000558609 LINC01549A6NIU2 74 aa9.55□□□□□ -0.88
CSHL1-208ENST00000558609 HERVK_113P63121 156 aa9.55□□□□□ -0.88
CSHL1-208ENST00000558609 GAGE2EQ4V326 116 aa9.55□□□□□ -0.88
CSHL1-208ENST00000558609 SCGB3A1Q96QR1 104 aa9.55□□□□□ -0.88
CSHL1-208ENST00000558609 GAGE2DQ9UEU5 116 aa9.55□□□□□ -0.88
CSHL1-208ENST00000558609 PSORS1C2Q9UIG4 136 aa9.55□□□□□ -0.88
CSHL1-208ENST00000558609 FAM168BA1KXE4 195 aa9.54□□□□□ -0.88
CSHL1-208ENST00000558609 PRSS2P07478 247 aa9.54□□□□□ -0.88
CSHL1-208ENST00000558609 KRTDAPP60985 99 aa9.54□□□□□ -0.88
CSHL1-208ENST00000558609 REG3GQ6UW15 175 aa9.54□□□□□ -0.88
CSHL1-208ENST00000558609 NDUFC2-KCTD14E9PQ53 114 aa9.53□□□□□ -0.88
CSHL1-208ENST00000558609 C6orf226Q5I0X4 101 aa9.53□□□□□ -0.88
CSHL1-208ENST00000558609 Q8IZM0 81 aa9.53□□□□□ -0.88
CSHL1-208ENST00000558609 MAP1LC3CQ9BXW4 147 aa9.53□□□□□ -0.88
CSHL1-208ENST00000558609 GEMIN7Q9H840 131 aaKnown RBP9.53□□□□□ -0.88
CSHL1-208ENST00000558609 CDKN2A-AS1Q9UH64 79 aa9.53□□□□□ -0.88
CSHL1-208ENST00000558609 TNXBP22105 4242 aa9.52□□□□□ -0.88
CSHL1-208ENST00000558609 SCGB1D1O95968 90 aa9.52□□□□□ -0.89
CSHL1-208ENST00000558609 CKS1BP61024 79 aa9.52□□□□□ -0.89
CSHL1-208ENST00000558609 TOMM7Q9P0U1 55 aa9.52□□□□□ -0.89
CSHL1-208ENST00000558609 FAM19A5Q7Z5A7 132 aaPredicted RBP9.51□□□□□ -0.89
CSHL1-208ENST00000558609 KRTAP7-1Q8IUC3 87 aa9.51□□□□□ -0.89
CSHL1-208ENST00000558609 TINCRA0A1B0GVN0 87 aa9.5□□□□□ -0.89
CSHL1-208ENST00000558609 H0Y8G0 127 aa9.5□□□□□ -0.89
CSHL1-208ENST00000558609 ATP5LO75964 103 aa9.5□□□□□ -0.89
CSHL1-208ENST00000558609 KRTAP10-8P60410 259 aa9.5□□□□□ -0.89
CSHL1-208ENST00000558609 C1orf137Q5JT78 98 aa9.5□□□□□ -0.89
CSHL1-208ENST00000558609 C9orf129Q5T035 196 aaKnown RBP9.49□□□□□ -0.89
CSHL1-208ENST00000558609 CST9LQ9H4G1 147 aa9.49□□□□□ -0.89
CSHL1-208ENST00000558609 IGLV5-45A0A087WSX0 123 aa9.48□□□□□ -0.89
CSHL1-208ENST00000558609 C20orf202A1L168 122 aa9.48□□□□□ -0.89
CSHL1-208ENST00000558609 C3orf79P0CE67 100 aa9.48□□□□□ -0.89
CSHL1-208ENST00000558609 KRTAP11-1Q8IUC1 163 aa9.48□□□□□ -0.89
CSHL1-208ENST00000558609 LINC00469Q8N7U9 141 aa9.48□□□□□ -0.89
CSHL1-208ENST00000558609 IFI27L1Q96BM0 104 aa9.48□□□□□ -0.89
CSHL1-208ENST00000558609 A0A096LNJ9 63 aa9.47□□□□□ -0.89
CSHL1-208ENST00000558609 SMIM1B2RUZ4 78 aa9.47□□□□□ -0.89
CSHL1-208ENST00000558609 F8VRH5 84 aa9.47□□□□□ -0.89
CSHL1-208ENST00000558609 M0QXV9 152 aa9.47□□□□□ -0.89
CSHL1-208ENST00000558609 IGLV7-43P04211 117 aa9.47□□□□□ -0.89
CSHL1-208ENST00000558609 CXCL5P42830 114 aa9.47□□□□□ -0.89
CSHL1-208ENST00000558609 PMVKQ15126 192 aa9.47□□□□□ -0.89
CSHL1-208ENST00000558609 SYS1-DBNDD2H3BUS1 97 aa9.46□□□□□ -0.9
CSHL1-208ENST00000558609 JOSD1Q15040 202 aaPredicted RBP9.46□□□□□ -0.9
CSHL1-208ENST00000558609 PET117Q6UWS5 81 aa9.45□□□□□ -0.9
CSHL1-208ENST00000558609 SMIM6P0DI80 62 aa9.44□□□□□ -0.9
CSHL1-208ENST00000558609 COX7B2Q8TF08 81 aa9.44□□□□□ -0.9
CSHL1-208ENST00000558609 DIRC1Q969H9 104 aa9.44□□□□□ -0.9
CSHL1-208ENST00000558609 UBE2BP63146 152 aa9.43□□□□□ -0.9
CSHL1-208ENST00000558609 ODF1Q14990 250 aa9.43□□□□□ -0.9
CSHL1-208ENST00000558609 S100A12P80511 92 aa9.42□□□□□ -0.9
CSHL1-208ENST00000558609 PYY3Q5JQD4 70 aa9.42□□□□□ -0.9
CSHL1-208ENST00000558609 XAGE1AQ9HD64 81 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms