RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 LINC00575Q6W349 94 aa7.78□□□□□ -1.16
PCAT29-201ENST00000558411 WFDC11Q8NEX6 87 aa7.78□□□□□ -1.16
PCAT29-201ENST00000558411 PKIGQ9Y2B9 76 aa7.78□□□□□ -1.16
PCAT29-201ENST00000558411 FLNCQ14315 2725 aa7.77□□□□□ -1.17
PCAT29-201ENST00000558411 IGKV3OR2-268A0A0C4DH90 116 aa7.77□□□□□ -1.17
PCAT29-201ENST00000558411 HAMPP81172 84 aa7.77□□□□□ -1.17
PCAT29-201ENST00000558411 COX17Q14061 63 aa7.77□□□□□ -1.17
PCAT29-201ENST00000558411 TRBV6-8A0A0A6YYG3 113 aa7.76□□□□□ -1.17
PCAT29-201ENST00000558411 MIFP14174 115 aa7.76□□□□□ -1.17
PCAT29-201ENST00000558411 LINC00959A0A1B0GUT2 108 aa7.76□□□□□ -1.17
PCAT29-201ENST00000558411 DYNLRB2Q8TF09 96 aa7.76□□□□□ -1.17
PCAT29-201ENST00000558411 ZFHX3Q15911 3703 aa7.76□□□□□ -1.17
PCAT29-201ENST00000558411 UTP20O75691 2785 aaKnown RBP7.75□□□□□ -1.17
PCAT29-201ENST00000558411 RNASE1P07998 156 aaKnown RBP7.75□□□□□ -1.17
PCAT29-201ENST00000558411 DEFB114Q30KQ6 69 aa7.75□□□□□ -1.17
PCAT29-201ENST00000558411 DEFB112Q30KQ8 113 aa7.75□□□□□ -1.17
PCAT29-201ENST00000558411 C6orf99Q4VX62 202 aa7.75□□□□□ -1.17
PCAT29-201ENST00000558411 Q8N3U1 123 aa7.75□□□□□ -1.17
PCAT29-201ENST00000558411 BBC3Q96PG8 261 aaPredicted RBP7.75□□□□□ -1.17
PCAT29-201ENST00000558411 LINC00474Q9P2X8 69 aa7.75□□□□□ -1.17
PCAT29-201ENST00000558411 C1orf195Q5TG92 126 aa7.74□□□□□ -1.17
PCAT29-201ENST00000558411 STHQ8IWL8 128 aa7.74□□□□□ -1.17
PCAT29-201ENST00000558411 LAMTOR3Q9UHA4 124 aa7.74□□□□□ -1.17
PCAT29-201ENST00000558411 HIVEP3Q5T1R4 2406 aa7.74□□□□□ -1.17
PCAT29-201ENST00000558411 PRB1P04280 392 aa7.73□□□□□ -1.17
PCAT29-201ENST00000558411 BRK1Q8WUW1 75 aa7.73□□□□□ -1.17
PCAT29-201ENST00000558411 V9GYY9 64 aa7.73□□□□□ -1.17
PCAT29-201ENST00000558411 SPTAN1Q13813 2472 aaKnown RBP7.73□□□□□ -1.17
PCAT29-201ENST00000558411 ZNF462Q96JM2 2506 aa7.73□□□□□ -1.17
PCAT29-201ENST00000558411 LOC100131303A0A0U1RQF7 123 aa7.73□□□□□ -1.17
PCAT29-201ENST00000558411 B4DSR2 109 aa7.73□□□□□ -1.17
PCAT29-201ENST00000558411 PRR3P79522 188 aaKnown RBP7.73□□□□□ -1.17
PCAT29-201ENST00000558411 TM2D3Q9BRN9 247 aa7.73□□□□□ -1.17
PCAT29-201ENST00000558411 C11orf68Q9H3H3 251 aaKnown RBP7.73□□□□□ -1.17
PCAT29-201ENST00000558411 ZNF702PQ9H963 129 aa7.73□□□□□ -1.17
PCAT29-201ENST00000558411 M0R2N4 97 aa7.72□□□□□ -1.17
PCAT29-201ENST00000558411 NREPQ16612 68 aa7.72□□□□□ -1.17
PCAT29-201ENST00000558411 NOP10Q9NPE3 64 aaKnown RBP7.72□□□□□ -1.17
PCAT29-201ENST00000558411 DEFB136Q30KP8 78 aa7.72□□□□□ -1.17
PCAT29-201ENST00000558411 ODF3L2Q3SX64 289 aa7.72□□□□□ -1.17
PCAT29-201ENST00000558411 TMEM254Q8TBM7 123 aa7.72□□□□□ -1.17
PCAT29-201ENST00000558411 C16orf74Q96GX8 76 aa7.72□□□□□ -1.17
PCAT29-201ENST00000558411 IGHV4-28A0A0C4DH34 117 aa7.71□□□□□ -1.18
PCAT29-201ENST00000558411 TRGV2A0A075B6R0 118 aa7.7□□□□□ -1.18
PCAT29-201ENST00000558411 IGHV4-30-2A0A087WSY4 118 aa7.7□□□□□ -1.18
PCAT29-201ENST00000558411 MUC7Q8TAX7 377 aa7.7□□□□□ -1.18
PCAT29-201ENST00000558411 C4orf3Q8WVX3 66 aa7.7□□□□□ -1.18
PCAT29-201ENST00000558411 MYO18BQ8IUG5 2567 aa7.7□□□□□ -1.18
PCAT29-201ENST00000558411 ASH1LQ9NR48 2969 aaKnown RBP7.7□□□□□ -1.18
PCAT29-201ENST00000558411 TRGV4A0A0C4DH28 118 aa7.7□□□□□ -1.18
PCAT29-201ENST00000558411 C18orf65Q6ZTR6 163 aa7.7□□□□□ -1.18
PCAT29-201ENST00000558411 A0A1B0GUV1 79 aa7.69□□□□□ -1.18
PCAT29-201ENST00000558411 PLAC8L1A1L4L8 177 aa7.69□□□□□ -1.18
PCAT29-201ENST00000558411 SEC61GP60059 68 aa7.69□□□□□ -1.18
PCAT29-201ENST00000558411 CRYBG3Q68DQ2 2970 aa7.69□□□□□ -1.18
PCAT29-201ENST00000558411 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.69□□□□□ -1.18
PCAT29-201ENST00000558411 ZNF843Q8N446 348 aa7.69□□□□□ -1.18
PCAT29-201ENST00000558411 CCL19Q99731 98 aa7.69□□□□□ -1.18
PCAT29-201ENST00000558411 USP9XQ93008 2570 aaPredicted RBP7.69□□□□□ -1.18
PCAT29-201ENST00000558411 BPY2O14599 106 aa7.68□□□□□ -1.18
PCAT29-201ENST00000558411 PLA2G2AP14555 144 aa7.68□□□□□ -1.18
PCAT29-201ENST00000558411 KIAA0087Q14695 138 aa7.68□□□□□ -1.18
PCAT29-201ENST00000558411 SPATA3Q8NHX4 192 aa7.68□□□□□ -1.18
PCAT29-201ENST00000558411 TENM4Q6N022 2769 aa7.67□□□□□ -1.18
PCAT29-201ENST00000558411 UBR5O95071 2799 aaPredicted RBP7.67□□□□□ -1.18
PCAT29-201ENST00000558411 PRYO14603 147 aa7.67□□□□□ -1.18
PCAT29-201ENST00000558411 IGHV4-31P0DP07 118 aa7.67□□□□□ -1.18
PCAT29-201ENST00000558411 ESRGQ1W209 222 aa7.67□□□□□ -1.18
PCAT29-201ENST00000558411 A0A0U1RQV1 116 aa7.66□□□□□ -1.18
PCAT29-201ENST00000558411 FAM208BQ5VWN6 2430 aa7.66□□□□□ -1.18
PCAT29-201ENST00000558411 C19orf84I3L1E1 186 aa7.66□□□□□ -1.18
PCAT29-201ENST00000558411 IGLV6-57P01721 117 aa7.66□□□□□ -1.18
PCAT29-201ENST00000558411 FAM229BQ4G0N7 80 aa7.66□□□□□ -1.18
PCAT29-201ENST00000558411 Q6YL49 198 aa7.66□□□□□ -1.18
PCAT29-201ENST00000558411 Q6ZQY7 126 aa7.66□□□□□ -1.18
PCAT29-201ENST00000558411 GNLYP22749 145 aa7.65□□□□□ -1.18
PCAT29-201ENST00000558411 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.65□□□□□ -1.18
PCAT29-201ENST00000558411 Q8NDZ9 215 aa7.65□□□□□ -1.18
PCAT29-201ENST00000558411 FUSP35637 526 aaKnown RBP eCLIP7.64□□□□□ -1.19
PCAT29-201ENST00000558411 KHDC1LQ5JSQ8 128 aa7.64□□□□□ -1.19
PCAT29-201ENST00000558411 CD164L2Q6UWJ8 174 aa7.64□□□□□ -1.19
PCAT29-201ENST00000558411 CMC4P56277 68 aaPredicted RBP7.64□□□□□ -1.19
PCAT29-201ENST00000558411 OCR1Q9BZK8 76 aa7.64□□□□□ -1.19
PCAT29-201ENST00000558411 CCL24O00175 119 aa7.63□□□□□ -1.19
PCAT29-201ENST00000558411 GIG44P09565 113 aaPredicted RBP7.63□□□□□ -1.19
PCAT29-201ENST00000558411 Q6ZTC4 211 aa7.63□□□□□ -1.19
PCAT29-201ENST00000558411 LINC01356Q8N9X3 169 aa7.63□□□□□ -1.19
PCAT29-201ENST00000558411 MPLKIPQ8TAP9 179 aa7.63□□□□□ -1.19
PCAT29-201ENST00000558411 AKAP6Q13023 2319 aa7.63□□□□□ -1.19
PCAT29-201ENST00000558411 DSCR9P59020 149 aa7.63□□□□□ -1.19
PCAT29-201ENST00000558411 SCXQ7RTU7 201 aa7.63□□□□□ -1.19
PCAT29-201ENST00000558411 LRRK2Q5S007 2527 aa7.62□□□□□ -1.19
PCAT29-201ENST00000558411 COX7BP24311 80 aa7.61□□□□□ -1.19
PCAT29-201ENST00000558411 PRR15Q8IV56 129 aa7.61□□□□□ -1.19
PCAT29-201ENST00000558411 CELSR1Q9NYQ6 3014 aa7.61□□□□□ -1.19
PCAT29-201ENST00000558411 CSMD2Q7Z408 3487 aa7.61□□□□□ -1.19
PCAT29-201ENST00000558411 CENPEQ02224 2701 aa7.61□□□□□ -1.19
PCAT29-201ENST00000558411 CELSR2Q9HCU4 2923 aa7.6□□□□□ -1.19
PCAT29-201ENST00000558411 CREBBPQ92793 2442 aa7.6□□□□□ -1.19
PCAT29-201ENST00000558411 FSHBP01225 129 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms