RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 MT1HL1P0DM35 61 aa6.28□□□□□ -1.4
USP3-207ENST00000558218 UBE2D1P51668 147 aa6.28□□□□□ -1.4
USP3-207ENST00000558218 KIAA0087Q14695 138 aa6.28□□□□□ -1.4
USP3-207ENST00000558218 LINC01600Q96MT4 127 aa6.28□□□□□ -1.4
USP3-207ENST00000558218 GNB1LQ9BYB4 327 aa6.28□□□□□ -1.4
USP3-207ENST00000558218 TRBV30A0A0K0K1B3 111 aa6.27□□□□□ -1.41
USP3-207ENST00000558218 ADCYAP1P18509 176 aa6.27□□□□□ -1.41
USP3-207ENST00000558218 S100PP25815 95 aa6.27□□□□□ -1.41
USP3-207ENST00000558218 IFITM2Q01629 132 aa6.27□□□□□ -1.41
USP3-207ENST00000558218 RPL18AQ02543 176 aaKnown RBP6.27□□□□□ -1.41
USP3-207ENST00000558218 C9orf116Q5BN46 136 aaPredicted RBP6.27□□□□□ -1.41
USP3-207ENST00000558218 REG3GQ6UW15 175 aa6.27□□□□□ -1.41
USP3-207ENST00000558218 TIMM17AQ99595 171 aa6.27□□□□□ -1.41
USP3-207ENST00000558218 UNQ6190/PRO20217Q6UXQ8 127 aa6.26□□□□□ -1.41
USP3-207ENST00000558218 C6orf48Q9UBA6 75 aa6.26□□□□□ -1.41
USP3-207ENST00000558218 LRP1Q07954 4544 aaKnown RBP6.26□□□□□ -1.41
USP3-207ENST00000558218 A0A0J9YXV3 536 aa6.25□□□□□ -1.41
USP3-207ENST00000558218 LINC01546A6NGU7 62 aa6.25□□□□□ -1.41
USP3-207ENST00000558218 HERVK_113P63121 156 aa6.25□□□□□ -1.41
USP3-207ENST00000558218 ODF1Q14990 250 aa6.25□□□□□ -1.41
USP3-207ENST00000558218 C10orf91Q5T1B1 145 aa6.25□□□□□ -1.41
USP3-207ENST00000558218 C10orf25Q5T742 122 aa6.25□□□□□ -1.41
USP3-207ENST00000558218 LINC00173Q6ZV60 143 aa6.25□□□□□ -1.41
USP3-207ENST00000558218 ERASQ7Z444 233 aa6.25□□□□□ -1.41
USP3-207ENST00000558218 TOMM6Q96B49 74 aa6.25□□□□□ -1.41
USP3-207ENST00000558218 PACRGQ96M98 296 aaPredicted RBP6.25□□□□□ -1.41
USP3-207ENST00000558218 PKHD1L1Q86WI1 4243 aa6.24□□□□□ -1.41
USP3-207ENST00000558218 MT-ND6P03923 174 aa6.24□□□□□ -1.41
USP3-207ENST00000558218 PRSS2P07478 247 aa6.24□□□□□ -1.41
USP3-207ENST00000558218 NDUFC2-KCTD14E9PQ53 114 aa6.23□□□□□ -1.41
USP3-207ENST00000558218 CKS1BP61024 79 aa6.23□□□□□ -1.41
USP3-207ENST00000558218 RHEBQ15382 184 aa6.23□□□□□ -1.41
USP3-207ENST00000558218 KIAA1644Q3SXP7 199 aa6.23□□□□□ -1.41
USP3-207ENST00000558218 C6orf226Q5I0X4 101 aa6.23□□□□□ -1.41
USP3-207ENST00000558218 Q8IZM0 81 aa6.23□□□□□ -1.41
USP3-207ENST00000558218 ALKBH7Q9BT30 221 aaPredicted RBP6.23□□□□□ -1.41
USP3-207ENST00000558218 GEMIN7Q9H840 131 aaKnown RBP6.23□□□□□ -1.41
USP3-207ENST00000558218 PSORS1C2Q9UIG4 136 aa6.23□□□□□ -1.41
USP3-207ENST00000558218 KRTAP10-8P60410 259 aa6.22□□□□□ -1.41
USP3-207ENST00000558218 SCGB3A1Q96QR1 104 aa6.22□□□□□ -1.41
USP3-207ENST00000558218 CARHSP1Q9Y2V2 147 aaKnown RBP6.22□□□□□ -1.41
USP3-207ENST00000558218 FAT3Q8TDW7 4589 aa6.22□□□□□ -1.41
USP3-207ENST00000558218 CXCL5P42830 114 aa6.21□□□□□ -1.42
USP3-207ENST00000558218 GAGE2EQ4V326 116 aa6.21□□□□□ -1.42
USP3-207ENST00000558218 ZC2HC1BQ5TFG8 222 aa6.21□□□□□ -1.42
USP3-207ENST00000558218 C2orf82Q6UX34 121 aa6.21□□□□□ -1.42
USP3-207ENST00000558218 PHF5AQ7RTV0 110 aaKnown RBP6.21□□□□□ -1.42
USP3-207ENST00000558218 COMMD7Q86VX2 200 aa6.21□□□□□ -1.42
USP3-207ENST00000558218 GAGE2DQ9UEU5 116 aa6.21□□□□□ -1.42
USP3-207ENST00000558218 TINCRA0A1B0GVN0 87 aa6.2□□□□□ -1.42
USP3-207ENST00000558218 C1orf137Q5JT78 98 aa6.2□□□□□ -1.42
USP3-207ENST00000558218 RPS10P5Q9NQ39 176 aa6.2□□□□□ -1.42
USP3-207ENST00000558218 CDKN2A-AS1Q9UH64 79 aa6.2□□□□□ -1.42
USP3-207ENST00000558218 IGLV5-45A0A087WSX0 123 aa6.19□□□□□ -1.42
USP3-207ENST00000558218 F8VRH5 84 aa6.19□□□□□ -1.42
USP3-207ENST00000558218 IGLV7-43P04211 117 aa6.19□□□□□ -1.42
USP3-207ENST00000558218 FABP9Q0Z7S8 132 aa6.19□□□□□ -1.42
USP3-207ENST00000558218 PMVKQ15126 192 aa6.19□□□□□ -1.42
USP3-207ENST00000558218 PDZD11Q5EBL8 140 aa6.19□□□□□ -1.42
USP3-207ENST00000558218 FA2HQ7L5A8 372 aa6.19□□□□□ -1.42
USP3-207ENST00000558218 DIRC1Q969H9 104 aa6.19□□□□□ -1.42
USP3-207ENST00000558218 CST9LQ9H4G1 147 aa6.19□□□□□ -1.42
USP3-207ENST00000558218 SMCO4Q9NRQ5 59 aa6.19□□□□□ -1.42
USP3-207ENST00000558218 TOMM7Q9P0U1 55 aa6.19□□□□□ -1.42
USP3-207ENST00000558218 FAM168BA1KXE4 195 aa6.18□□□□□ -1.42
USP3-207ENST00000558218 C9orf129Q5T035 196 aaKnown RBP6.18□□□□□ -1.42
USP3-207ENST00000558218 M0QXV9 152 aa6.17□□□□□ -1.42
USP3-207ENST00000558218 LBHQ53QV2 105 aaPredicted RBP6.17□□□□□ -1.42
USP3-207ENST00000558218 FAM19A5Q7Z5A7 132 aaPredicted RBP6.17□□□□□ -1.42
USP3-207ENST00000558218 KRTAP7-1Q8IUC3 87 aa6.17□□□□□ -1.42
USP3-207ENST00000558218 LINC00469Q8N7U9 141 aa6.17□□□□□ -1.42
USP3-207ENST00000558218 KRTAP23-1A1A580 65 aa6.16□□□□□ -1.42
USP3-207ENST00000558218 SMIM1B2RUZ4 78 aa6.16□□□□□ -1.42
USP3-207ENST00000558218 H3BRM9 83 aa6.16□□□□□ -1.42
USP3-207ENST00000558218 LINC00614P0C842 121 aa6.16□□□□□ -1.42
USP3-207ENST00000558218 NDUFA5Q16718 116 aa6.16□□□□□ -1.42
USP3-207ENST00000558218 TP73-AS1Q9UF72 201 aa6.16□□□□□ -1.42
USP3-207ENST00000558218 TRAPPC1Q9Y5R8 145 aa6.16□□□□□ -1.42
USP3-207ENST00000558218 SNAPINO95295 136 aa6.15□□□□□ -1.42
USP3-207ENST00000558218 RAB5BP61020 215 aa6.15□□□□□ -1.42
USP3-207ENST00000558218 UBE2BP63146 152 aa6.15□□□□□ -1.42
USP3-207ENST00000558218 SVBPQ8N300 66 aa6.15□□□□□ -1.42
USP3-207ENST00000558218 COX7B2Q8TF08 81 aa6.15□□□□□ -1.42
USP3-207ENST00000558218 H0Y9J4 135 aa6.14□□□□□ -1.43
USP3-207ENST00000558218 NUPR1O60356 82 aa6.14□□□□□ -1.43
USP3-207ENST00000558218 KRTAP11-1Q8IUC1 163 aa6.14□□□□□ -1.43
USP3-207ENST00000558218 C18orf32Q8TCD1 76 aa6.14□□□□□ -1.43
USP3-207ENST00000558218 C22orf24Q9Y442 160 aa6.14□□□□□ -1.43
USP3-207ENST00000558218 IGLV1-50A0A075B6I6 118 aa6.13□□□□□ -1.43
USP3-207ENST00000558218 ATP5LO75964 103 aa6.13□□□□□ -1.43
USP3-207ENST00000558218 APOC3P02656 99 aa6.13□□□□□ -1.43
USP3-207ENST00000558218 IGLC3P0DOY3 106 aa6.13□□□□□ -1.43
USP3-207ENST00000558218 ZNF861PO60384 105 aa6.12□□□□□ -1.43
USP3-207ENST00000558218 HBDP02042 147 aa6.12□□□□□ -1.43
USP3-207ENST00000558218 SFTA2Q6UW10 78 aa6.12□□□□□ -1.43
USP3-207ENST00000558218 MRPL55Q7Z7F7 128 aaKnown RBP6.12□□□□□ -1.43
USP3-207ENST00000558218 XAGE1AQ9HD64 81 aa6.12□□□□□ -1.43
USP3-207ENST00000558218 A0A096LNJ9 63 aa6.11□□□□□ -1.43
USP3-207ENST00000558218 IGLV5-39A0A0G2JS06 123 aa6.11□□□□□ -1.43
USP3-207ENST00000558218 URB1-AS1Q96HZ7 61 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms