RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 HNRNPA3P51991 378 aaKnown RBP6.98□□□□□ -1.29
GABRB3-213ENST00000557765 CNBPP62633 177 aaKnown RBP6.98□□□□□ -1.29
GABRB3-213ENST00000557765 MAJINQ3KP22 176 aa6.98□□□□□ -1.29
GABRB3-213ENST00000557765 C1orf134Q5TEV5 83 aa6.98□□□□□ -1.29
GABRB3-213ENST00000557765 Q9HAA7 133 aa6.98□□□□□ -1.29
GABRB3-213ENST00000557765 MEIG1Q5JSS6 88 aa6.97□□□□□ -1.29
GABRB3-213ENST00000557765 C14orf144Q96I85 54 aa6.97□□□□□ -1.29
GABRB3-213ENST00000557765 SPANXDQ9BXN6 97 aa6.97□□□□□ -1.29
GABRB3-213ENST00000557765 SPANXCQ9NY87 97 aa6.97□□□□□ -1.29
GABRB3-213ENST00000557765 DYNC2H1Q8NCM8 4307 aaKnown RBP6.97□□□□□ -1.29
GABRB3-213ENST00000557765 LCE6AA0A183 80 aa6.96□□□□□ -1.3
GABRB3-213ENST00000557765 TLX1NBP0CAT3 122 aa6.96□□□□□ -1.3
GABRB3-213ENST00000557765 HSD52Q0P140 79 aa6.96□□□□□ -1.3
GABRB3-213ENST00000557765 LBHQ53QV2 105 aaPredicted RBP6.96□□□□□ -1.3
GABRB3-213ENST00000557765 CDPF1Q6NVV7 123 aa6.96□□□□□ -1.3
GABRB3-213ENST00000557765 PCP2Q8IVA1 136 aa6.96□□□□□ -1.3
GABRB3-213ENST00000557765 CAMK2N2Q96S95 79 aa6.96□□□□□ -1.3
GABRB3-213ENST00000557765 TOMM7Q9P0U1 55 aa6.96□□□□□ -1.3
GABRB3-213ENST00000557765 DNAH7Q8WXX0 4024 aa6.96□□□□□ -1.3
GABRB3-213ENST00000557765 LOC107984156A0A0G2JMH3 177 aa6.95□□□□□ -1.3
GABRB3-213ENST00000557765 USP17L23D6RBM5 183 aa6.95□□□□□ -1.3
GABRB3-213ENST00000557765 RPL24P83731 157 aaKnown RBP6.95□□□□□ -1.3
GABRB3-213ENST00000557765 SYCNQ0VAF6 134 aa6.95□□□□□ -1.3
GABRB3-213ENST00000557765 Q6ZRN7 208 aaPredicted RBP6.95□□□□□ -1.3
GABRB3-213ENST00000557765 ARL17AQ8IVW1 177 aa6.95□□□□□ -1.3
GABRB3-213ENST00000557765 C15orf56Q8N910 161 aa6.95□□□□□ -1.3
GABRB3-213ENST00000557765 KRTAP1-5Q9BYS1 174 aa6.95□□□□□ -1.3
GABRB3-213ENST00000557765 CSMD3Q7Z407 3707 aa6.94□□□□□ -1.3
GABRB3-213ENST00000557765 TENM2Q9NT68 2774 aa6.94□□□□□ -1.3
GABRB3-213ENST00000557765 TSPEAR-AS2P59090 65 aa6.94□□□□□ -1.3
GABRB3-213ENST00000557765 SRSF9Q13242 221 aaKnown RBP eCLIP6.94□□□□□ -1.3
GABRB3-213ENST00000557765 LINC00336Q6ZUF6 198 aa6.94□□□□□ -1.3
GABRB3-213ENST00000557765 KRTAP3-3Q9BYR6 98 aa6.94□□□□□ -1.3
GABRB3-213ENST00000557765 KRTAP3-2Q9BYR7 98 aa6.94□□□□□ -1.3
GABRB3-213ENST00000557765 LINC00474Q9P2X8 69 aa6.94□□□□□ -1.3
GABRB3-213ENST00000557765 ERG28Q9UKR5 140 aa6.94□□□□□ -1.3
GABRB3-213ENST00000557765 CBY1Q9Y3M2 126 aa6.94□□□□□ -1.3
GABRB3-213ENST00000557765 NDUFC2-KCTD14E9PQ53 114 aa6.92□□□□□ -1.3
GABRB3-213ENST00000557765 C2orf91Q6ZV80 131 aa6.92□□□□□ -1.3
GABRB3-213ENST00000557765 MAPKAPK5-AS1Q8N8E1 139 aa6.92□□□□□ -1.3
GABRB3-213ENST00000557765 CARD19Q96LW7 228 aa6.92□□□□□ -1.3
GABRB3-213ENST00000557765 HIST1H4GQ99525 98 aa6.92□□□□□ -1.3
GABRB3-213ENST00000557765 LRCOL1A6NCL2 159 aa6.91□□□□□ -1.3
GABRB3-213ENST00000557765 A6NDN8 102 aa6.91□□□□□ -1.3
GABRB3-213ENST00000557765 NDUFC2O95298 119 aa6.91□□□□□ -1.3
GABRB3-213ENST00000557765 PRO1933Q9H354 126 aa6.91□□□□□ -1.3
GABRB3-213ENST00000557765 LINC00158P58513 81 aa6.9□□□□□ -1.3
GABRB3-213ENST00000557765 CEND1Q8N111 149 aa6.9□□□□□ -1.3
GABRB3-213ENST00000557765 LITAFQ99732 161 aa6.9□□□□□ -1.3
GABRB3-213ENST00000557765 A0A087WTM6 91 aa6.89□□□□□ -1.31
GABRB3-213ENST00000557765 LOC107984640A0A0U1RRK4 108 aa6.89□□□□□ -1.31
GABRB3-213ENST00000557765 Q8N814 137 aa6.89□□□□□ -1.31
GABRB3-213ENST00000557765 PGPEP1Q9NXJ5 209 aa6.89□□□□□ -1.31
GABRB3-213ENST00000557765 C9orf163Q8N9P6 203 aa6.88□□□□□ -1.31
GABRB3-213ENST00000557765 PLA2G2DQ9UNK4 145 aa6.88□□□□□ -1.31
GABRB3-213ENST00000557765 TRBV10-2A0A0K0K1G8 114 aa6.87□□□□□ -1.31
GABRB3-213ENST00000557765 HIGD2BQ4VC39 106 aa6.87□□□□□ -1.31
GABRB3-213ENST00000557765 C2orf82Q6UX34 121 aa6.87□□□□□ -1.31
GABRB3-213ENST00000557765 UNQ6190/PRO20217Q6UXQ8 127 aa6.87□□□□□ -1.31
GABRB3-213ENST00000557765 LINC00308Q8TCZ7 52 aa6.87□□□□□ -1.31
GABRB3-213ENST00000557765 TTTY13Q9BZ97 58 aa6.87□□□□□ -1.31
GABRB3-213ENST00000557765 C6orf48Q9UBA6 75 aa6.87□□□□□ -1.31
GABRB3-213ENST00000557765 TRAV13-2A0A0B4J235 113 aa6.86□□□□□ -1.31
GABRB3-213ENST00000557765 A0A0B4J2C4 111 aa6.86□□□□□ -1.31
GABRB3-213ENST00000557765 C16orf90A8MZG2 172 aa6.86□□□□□ -1.31
GABRB3-213ENST00000557765 M0R2N4 97 aa6.86□□□□□ -1.31
GABRB3-213ENST00000557765 SMIM13P0DJ93 91 aa6.86□□□□□ -1.31
GABRB3-213ENST00000557765 CTAG1AP78358 180 aa6.86□□□□□ -1.31
GABRB3-213ENST00000557765 Q6ZRU5 148 aa6.86□□□□□ -1.31
GABRB3-213ENST00000557765 MIR7-3HGQ8N6C7 128 aa6.86□□□□□ -1.31
GABRB3-213ENST00000557765 A0A1B0GWB2 263 aa6.85□□□□□ -1.31
GABRB3-213ENST00000557765 STARD9Q9P2P6 4700 aa6.84□□□□□ -1.31
GABRB3-213ENST00000557765 PFN2P35080 140 aa6.84□□□□□ -1.31
GABRB3-213ENST00000557765 BVES-AS1Q5T3Y7 98 aa6.84□□□□□ -1.31
GABRB3-213ENST00000557765 SND1-IT1Q9HBX3 110 aa6.84□□□□□ -1.31
GABRB3-213ENST00000557765 COL5A1-AS1Q5SY13 56 aa6.83□□□□□ -1.32
GABRB3-213ENST00000557765 ADAMTSL4-AS1Q5T5F5 129 aa6.83□□□□□ -1.32
GABRB3-213ENST00000557765 C10orf25Q5T742 122 aa6.83□□□□□ -1.32
GABRB3-213ENST00000557765 MUSTN1Q8IVN3 82 aa6.83□□□□□ -1.32
GABRB3-213ENST00000557765 PLECQ15149 4684 aaKnown RBP6.82□□□□□ -1.32
GABRB3-213ENST00000557765 LYRM7Q5U5X0 104 aa6.82□□□□□ -1.32
GABRB3-213ENST00000557765 TMEM126AQ9H061 195 aa6.82□□□□□ -1.32
GABRB3-213ENST00000557765 IGLV5-37A0A075B6J1 123 aa6.81□□□□□ -1.32
GABRB3-213ENST00000557765 PCP4L1A6NKN8 68 aa6.81□□□□□ -1.32
GABRB3-213ENST00000557765 RTL8CO15255 209 aa6.81□□□□□ -1.32
GABRB3-213ENST00000557765 RAB37Q96AX2 223 aa6.81□□□□□ -1.32
GABRB3-213ENST00000557765 PRO1854Q9UHT4 67 aa6.81□□□□□ -1.32
GABRB3-213ENST00000557765 VPS13DQ5THJ4 4388 aa6.8□□□□□ -1.32
GABRB3-213ENST00000557765 A4D1N5 150 aa6.8□□□□□ -1.32
GABRB3-213ENST00000557765 SLPIP03973 132 aa6.8□□□□□ -1.32
GABRB3-213ENST00000557765 IGLV5-52A0A0A0MRZ9 124 aa6.79□□□□□ -1.32
GABRB3-213ENST00000557765 LECT2O14960 151 aa6.79□□□□□ -1.32
GABRB3-213ENST00000557765 HINT1P49773 126 aaPredicted RBP6.79□□□□□ -1.32
GABRB3-213ENST00000557765 SDIM1Q6ZPB5 146 aa6.79□□□□□ -1.32
GABRB3-213ENST00000557765 Q6ZRP5 223 aa6.79□□□□□ -1.32
GABRB3-213ENST00000557765 M0R378 163 aa6.78□□□□□ -1.32
GABRB3-213ENST00000557765 COX6CP09669 75 aa6.78□□□□□ -1.32
GABRB3-213ENST00000557765 FXYD2P54710 66 aa6.78□□□□□ -1.32
GABRB3-213ENST00000557765 RPL18AQ02543 176 aaKnown RBP6.78□□□□□ -1.32
GABRB3-213ENST00000557765 WFDC2Q14508 124 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms