RNA–Protein interactions for RNA: ENST00000557559.1

PRKCH-225, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-225ENST00000557559 GAGE2DQ9UEU5 116 aa4.3□□□□□ -1.72
PRKCH-225ENST00000557559 A0A087X002 238 aa4.29□□□□□ -1.72
PRKCH-225ENST00000557559 TRBV30A0A0K0K1B3 111 aa4.29□□□□□ -1.72
PRKCH-225ENST00000557559 M0R143 59 aa4.29□□□□□ -1.72
PRKCH-225ENST00000557559 PPP1R17O96001 155 aa4.29□□□□□ -1.72
PRKCH-225ENST00000557559 POLR2KP53803 58 aaKnown RBP4.29□□□□□ -1.72
PRKCH-225ENST00000557559 LINC00173Q6ZV60 143 aa4.29□□□□□ -1.72
PRKCH-225ENST00000557559 BORCS7Q96B45 105 aa4.29□□□□□ -1.72
PRKCH-225ENST00000557559 KIR2DL4Q99706 377 aa4.29□□□□□ -1.72
PRKCH-225ENST00000557559 TIMM21Q9BVV7 248 aa4.29□□□□□ -1.72
PRKCH-225ENST00000557559 RNASE7Q9H1E1 156 aaKnown RBP4.29□□□□□ -1.72
PRKCH-225ENST00000557559 C6orf48Q9UBA6 75 aa4.29□□□□□ -1.72
PRKCH-225ENST00000557559 UBE2D4Q9Y2X8 147 aa4.29□□□□□ -1.72
PRKCH-225ENST00000557559 TRBV20OR9-2A0A075B6H5 130 aa4.28□□□□□ -1.72
PRKCH-225ENST00000557559 IGLV7-46A0A075B6I9 117 aa4.28□□□□□ -1.72
PRKCH-225ENST00000557559 KRTAP4-8A0A0G2JLE6 195 aa4.28□□□□□ -1.72
PRKCH-225ENST00000557559 NDUFC2-KCTD14E9PQ53 114 aa4.28□□□□□ -1.72
PRKCH-225ENST00000557559 H0Y8G0 127 aa4.28□□□□□ -1.72
PRKCH-225ENST00000557559 HIST1H2BKO60814 126 aa4.28□□□□□ -1.72
PRKCH-225ENST00000557559 HIST1H2BJP06899 126 aa4.28□□□□□ -1.72
PRKCH-225ENST00000557559 FABP4P15090 132 aa4.28□□□□□ -1.72
PRKCH-225ENST00000557559 HIST1H2BOP23527 126 aa4.28□□□□□ -1.72
PRKCH-225ENST00000557559 G0S2P27469 103 aa4.28□□□□□ -1.72
PRKCH-225ENST00000557559 HIST1H2BBP33778 126 aa4.28□□□□□ -1.72
PRKCH-225ENST00000557559 HIST1H2BDP58876 126 aa4.28□□□□□ -1.72
PRKCH-225ENST00000557559 HIST1H2BCP62807 126 aa4.28□□□□□ -1.72
PRKCH-225ENST00000557559 JOSD1Q15040 202 aaPredicted RBP4.28□□□□□ -1.72
PRKCH-225ENST00000557559 HIST2H2BEQ16778 126 aa4.28□□□□□ -1.72
PRKCH-225ENST00000557559 RNASE13Q5GAN3 156 aaKnown RBP4.28□□□□□ -1.72
PRKCH-225ENST00000557559 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.28□□□□□ -1.72
PRKCH-225ENST00000557559 PET117Q6UWS5 81 aa4.28□□□□□ -1.72
PRKCH-225ENST00000557559 Q6ZUT4 128 aa4.28□□□□□ -1.72
PRKCH-225ENST00000557559 LINC00304Q8N9R0 145 aa4.28□□□□□ -1.72
PRKCH-225ENST00000557559 HIST1H2BHQ93079 126 aa4.28□□□□□ -1.72
PRKCH-225ENST00000557559 HIST1H2BNQ99877 126 aa4.28□□□□□ -1.72
PRKCH-225ENST00000557559 HIST1H2BMQ99879 126 aa4.28□□□□□ -1.72
PRKCH-225ENST00000557559 RETNLBQ9BQ08 111 aa4.28□□□□□ -1.72
PRKCH-225ENST00000557559 EIF5A2Q9GZV4 153 aaKnown RBP4.28□□□□□ -1.72
PRKCH-225ENST00000557559 MUC17Q685J3 4493 aa4.28□□□□□ -1.72
PRKCH-225ENST00000557559 TGIF2-C20orf24A0A0A6YYL0 155 aa4.27□□□□□ -1.73
PRKCH-225ENST00000557559 IGHV3OR16-9A0A0B4J2B5 98 aa4.27□□□□□ -1.73
PRKCH-225ENST00000557559 ZNF727A8MUV8 499 aa4.27□□□□□ -1.73
PRKCH-225ENST00000557559 B5MCH6 92 aa4.27□□□□□ -1.73
PRKCH-225ENST00000557559 VCYO14598 125 aa4.27□□□□□ -1.73
PRKCH-225ENST00000557559 TAGLN2P37802 199 aaKnown RBP4.27□□□□□ -1.73
PRKCH-225ENST00000557559 FOXA3P55318 350 aaPredicted RBP4.27□□□□□ -1.73
PRKCH-225ENST00000557559 C10orf25Q5T742 122 aa4.27□□□□□ -1.73
PRKCH-225ENST00000557559 UNQ6190/PRO20217Q6UXQ8 127 aa4.27□□□□□ -1.73
PRKCH-225ENST00000557559 KRTAP7-1Q8IUC3 87 aa4.27□□□□□ -1.73
PRKCH-225ENST00000557559 PACRGQ96M98 296 aaPredicted RBP4.27□□□□□ -1.73
PRKCH-225ENST00000557559 KRTAP3-1Q9BYR8 98 aa4.27□□□□□ -1.73
PRKCH-225ENST00000557559 A8MWL6 223 aa4.26□□□□□ -1.73
PRKCH-225ENST00000557559 BCE1O60756 84 aa4.26□□□□□ -1.73
PRKCH-225ENST00000557559 TRGC2P03986 189 aa4.26□□□□□ -1.73
PRKCH-225ENST00000557559 SRP19P09132 144 aaKnown RBP4.26□□□□□ -1.73
PRKCH-225ENST00000557559 FAM229BQ4G0N7 80 aa4.26□□□□□ -1.73
PRKCH-225ENST00000557559 PDZD11Q5EBL8 140 aa4.26□□□□□ -1.73
PRKCH-225ENST00000557559 HIST1H2BLQ99880 126 aa4.26□□□□□ -1.73
PRKCH-225ENST00000557559 CTDSP1Q9GZU7 261 aa4.26□□□□□ -1.73
PRKCH-225ENST00000557559 TMEM191AQ9H0A3 160 aa4.26□□□□□ -1.73
PRKCH-225ENST00000557559 SCGB1A1P11684 91 aa4.25□□□□□ -1.73
PRKCH-225ENST00000557559 SUMO2P61956 95 aaKnown RBP4.25□□□□□ -1.73
PRKCH-225ENST00000557559 HBBP68871 147 aa4.25□□□□□ -1.73
PRKCH-225ENST00000557559 C9orf129Q5T035 196 aaKnown RBP4.25□□□□□ -1.73
PRKCH-225ENST00000557559 SNHG12Q9BXW3 62 aa4.25□□□□□ -1.73
PRKCH-225ENST00000557559 PPDPFQ9H3Y8 114 aa4.25□□□□□ -1.73
PRKCH-225ENST00000557559 SPANXA1Q9NS26 97 aa4.25□□□□□ -1.73
PRKCH-225ENST00000557559 TP73-AS1Q9UF72 201 aa4.25□□□□□ -1.73
PRKCH-225ENST00000557559 A0A1B0GUT8 65 aa4.24□□□□□ -1.73
PRKCH-225ENST00000557559 GAGE10A6NGK3 116 aa4.24□□□□□ -1.73
PRKCH-225ENST00000557559 MRPS36P82909 103 aaKnown RBP4.24□□□□□ -1.73
PRKCH-225ENST00000557559 COA6Q5JTJ3 125 aaKnown RBP4.24□□□□□ -1.73
PRKCH-225ENST00000557559 MTURNQ8N3F0 131 aa4.24□□□□□ -1.73
PRKCH-225ENST00000557559 LINC00337Q8N6G1 96 aa4.24□□□□□ -1.73
PRKCH-225ENST00000557559 C22orf24Q9Y442 160 aa4.24□□□□□ -1.73
PRKCH-225ENST00000557559 TRBV24-1A0A075B6N3 115 aa4.23□□□□□ -1.73
PRKCH-225ENST00000557559 IGKV2D-26A0A0A0MRZ7 120 aa4.23□□□□□ -1.73
PRKCH-225ENST00000557559 TMEM238C9JI98 176 aa4.23□□□□□ -1.73
PRKCH-225ENST00000557559 K7EN84 100 aa4.23□□□□□ -1.73
PRKCH-225ENST00000557559 KIAA0087Q14695 138 aa4.23□□□□□ -1.73
PRKCH-225ENST00000557559 ASB16-AS1Q495Z4 193 aa4.23□□□□□ -1.73
PRKCH-225ENST00000557559 FAM231DQ6ZW35 169 aa4.23□□□□□ -1.73
PRKCH-225ENST00000557559 FP248Q71RG6 208 aaPredicted RBP4.23□□□□□ -1.73
PRKCH-225ENST00000557559 MRPL55Q7Z7F7 128 aaKnown RBP4.23□□□□□ -1.73
PRKCH-225ENST00000557559 HIGD1CA8MV81 97 aa4.22□□□□□ -1.73
PRKCH-225ENST00000557559 PRSS2P07478 247 aa4.22□□□□□ -1.73
PRKCH-225ENST00000557559 NPSP0C0P6 89 aa4.22□□□□□ -1.73
PRKCH-225ENST00000557559 UBE2AP49459 152 aa4.22□□□□□ -1.73
PRKCH-225ENST00000557559 SEC61BP60468 96 aaKnown RBP4.22□□□□□ -1.73
PRKCH-225ENST00000557559 PNRC1Q12796 327 aaPredicted RBP4.22□□□□□ -1.73
PRKCH-225ENST00000557559 KRTAP13-2Q52LG2 175 aa4.22□□□□□ -1.73
PRKCH-225ENST00000557559 COL5A1-AS1Q5SY13 56 aa4.22□□□□□ -1.73
PRKCH-225ENST00000557559 LINC00242Q5T6M2 205 aa4.22□□□□□ -1.73
PRKCH-225ENST00000557559 C2orf82Q6UX34 121 aa4.22□□□□□ -1.73
PRKCH-225ENST00000557559 AMN1Q8IY45 258 aa4.22□□□□□ -1.73
PRKCH-225ENST00000557559 OCC1Q8TAD7 63 aa4.22□□□□□ -1.73
PRKCH-225ENST00000557559 C20orf202A1L168 122 aa4.21□□□□□ -1.74
PRKCH-225ENST00000557559 CKS1BP61024 79 aa4.21□□□□□ -1.74
PRKCH-225ENST00000557559 RPL39P62891 51 aaKnown RBP4.21□□□□□ -1.74
PRKCH-225ENST00000557559 RPL32P62910 135 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms