RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 C6orf226Q5I0X4 101 aa5.34□□□□□ -1.55
PSEN1-223ENST00000557511 Q6ZRU5 148 aa5.34□□□□□ -1.55
PSEN1-223ENST00000557511 LINC00469Q8N7U9 141 aa5.34□□□□□ -1.55
PSEN1-223ENST00000557511 FAM104AQ969W3 186 aa5.34□□□□□ -1.55
PSEN1-223ENST00000557511 CHCHD1Q96BP2 118 aaKnown RBP5.34□□□□□ -1.55
PSEN1-223ENST00000557511 TOMM7Q9P0U1 55 aa5.34□□□□□ -1.55
PSEN1-223ENST00000557511 H3BRM9 83 aa5.33□□□□□ -1.56
PSEN1-223ENST00000557511 HSBP1O75506 76 aa5.33□□□□□ -1.56
PSEN1-223ENST00000557511 RPL18AQ02543 176 aaKnown RBP5.33□□□□□ -1.56
PSEN1-223ENST00000557511 GAGE2BQ13066 116 aa5.33□□□□□ -1.56
PSEN1-223ENST00000557511 ZC2HC1BQ5TFG8 222 aa5.33□□□□□ -1.56
PSEN1-223ENST00000557511 LINC00173Q6ZV60 143 aa5.33□□□□□ -1.56
PSEN1-223ENST00000557511 STPG4Q8N801 248 aa5.33□□□□□ -1.56
PSEN1-223ENST00000557511 SPACA4Q8TDM5 124 aa5.33□□□□□ -1.56
PSEN1-223ENST00000557511 ABCA13Q86UQ4 5058 aa5.32□□□□□ -1.56
PSEN1-223ENST00000557511 A0A087WYN8 130 aa5.32□□□□□ -1.56
PSEN1-223ENST00000557511 A0A0J9YXV3 536 aa5.32□□□□□ -1.56
PSEN1-223ENST00000557511 TINCRA0A1B0GVN0 87 aa5.32□□□□□ -1.56
PSEN1-223ENST00000557511 ATP6V1G1O75348 118 aa5.32□□□□□ -1.56
PSEN1-223ENST00000557511 CHTF8P0CG12 524 aa5.32□□□□□ -1.56
PSEN1-223ENST00000557511 RPL37AP61513 92 aaKnown RBP5.32□□□□□ -1.56
PSEN1-223ENST00000557511 FAM19A3Q7Z5A8 133 aa5.32□□□□□ -1.56
PSEN1-223ENST00000557511 YPEL4Q96NS1 127 aa5.32□□□□□ -1.56
PSEN1-223ENST00000557511 CST9LQ9H4G1 147 aa5.32□□□□□ -1.56
PSEN1-223ENST00000557511 MRPL35Q9NZE8 188 aaKnown RBP5.32□□□□□ -1.56
PSEN1-223ENST00000557511 HSPG2P98160 4391 aa5.31□□□□□ -1.56
PSEN1-223ENST00000557511 A0A096LNI7 61 aa5.31□□□□□ -1.56
PSEN1-223ENST00000557511 TRBV30A0A0K0K1B3 111 aa5.31□□□□□ -1.56
PSEN1-223ENST00000557511 TRGC2P03986 189 aa5.31□□□□□ -1.56
PSEN1-223ENST00000557511 CXCL5P42830 114 aa5.31□□□□□ -1.56
PSEN1-223ENST00000557511 CIRBPQ14011 172 aaKnown RBP5.31□□□□□ -1.56
PSEN1-223ENST00000557511 ODF1Q14990 250 aa5.31□□□□□ -1.56
PSEN1-223ENST00000557511 PMCHL1Q16048 86 aa5.31□□□□□ -1.56
PSEN1-223ENST00000557511 PCLOQ9Y6V0 5065 aa5.31□□□□□ -1.56
PSEN1-223ENST00000557511 PTTG1IPP53801 180 aa5.3□□□□□ -1.56
PSEN1-223ENST00000557511 PDZD11Q5EBL8 140 aa5.3□□□□□ -1.56
PSEN1-223ENST00000557511 Q8IZM0 81 aa5.3□□□□□ -1.56
PSEN1-223ENST00000557511 KRTAP4-5Q9BYR2 181 aa5.3□□□□□ -1.56
PSEN1-223ENST00000557511 PLAC8Q9NZF1 115 aa5.3□□□□□ -1.56
PSEN1-223ENST00000557511 CDKN2A-AS1Q9UH64 79 aa5.3□□□□□ -1.56
PSEN1-223ENST00000557511 DNAH8Q96JB1 4490 aa5.3□□□□□ -1.56
PSEN1-223ENST00000557511 B5MCH6 92 aa5.29□□□□□ -1.56
PSEN1-223ENST00000557511 PANO1I0J062 215 aa5.29□□□□□ -1.56
PSEN1-223ENST00000557511 UNQ6190/PRO20217Q6UXQ8 127 aa5.29□□□□□ -1.56
PSEN1-223ENST00000557511 COX7B2Q8TF08 81 aa5.29□□□□□ -1.56
PSEN1-223ENST00000557511 URB1-AS1Q96HZ7 61 aa5.29□□□□□ -1.56
PSEN1-223ENST00000557511 COLCA2A8K830 154 aa5.28□□□□□ -1.56
PSEN1-223ENST00000557511 F8VRH5 84 aa5.28□□□□□ -1.56
PSEN1-223ENST00000557511 KIAA0087Q14695 138 aa5.28□□□□□ -1.56
PSEN1-223ENST00000557511 GAGE2EQ4V326 116 aa5.28□□□□□ -1.56
PSEN1-223ENST00000557511 C2orf82Q6UX34 121 aa5.28□□□□□ -1.56
PSEN1-223ENST00000557511 IFI27L1Q96BM0 104 aa5.28□□□□□ -1.56
PSEN1-223ENST00000557511 C6orf48Q9UBA6 75 aa5.28□□□□□ -1.56
PSEN1-223ENST00000557511 GAGE2DQ9UEU5 116 aa5.28□□□□□ -1.56
PSEN1-223ENST00000557511 CHTOPQ9Y3Y2 248 aaKnown RBP5.28□□□□□ -1.56
PSEN1-223ENST00000557511 IGLV5-45A0A087WSX0 123 aa5.27□□□□□ -1.57
PSEN1-223ENST00000557511 A0A096LNJ9 63 aa5.27□□□□□ -1.57
PSEN1-223ENST00000557511 SMIM1B2RUZ4 78 aa5.27□□□□□ -1.57
PSEN1-223ENST00000557511 NDUFC2-KCTD14E9PQ53 114 aa5.27□□□□□ -1.57
PSEN1-223ENST00000557511 LEPROTL1O95214 131 aa5.27□□□□□ -1.57
PSEN1-223ENST00000557511 SPINK8P0C7L1 97 aa5.27□□□□□ -1.57
PSEN1-223ENST00000557511 TLX1NBP0CAT3 122 aa5.27□□□□□ -1.57
PSEN1-223ENST00000557511 IGLC3P0DOY3 106 aa5.27□□□□□ -1.57
PSEN1-223ENST00000557511 TMEM170BQ5T4T1 132 aa5.27□□□□□ -1.57
PSEN1-223ENST00000557511 C10orf25Q5T742 122 aa5.27□□□□□ -1.57
PSEN1-223ENST00000557511 HSPB8Q9UJY1 196 aa5.27□□□□□ -1.57
PSEN1-223ENST00000557511 TRAV12-1A0A0B4J245 112 aa5.26□□□□□ -1.57
PSEN1-223ENST00000557511 H0Y8G0 127 aa5.26□□□□□ -1.57
PSEN1-223ENST00000557511 SCO1O75880 301 aa5.26□□□□□ -1.57
PSEN1-223ENST00000557511 SERF1AO75920 110 aa5.26□□□□□ -1.57
PSEN1-223ENST00000557511 C9orf116Q5BN46 136 aaPredicted RBP5.26□□□□□ -1.57
PSEN1-223ENST00000557511 SFTA2Q6UW10 78 aa5.26□□□□□ -1.57
PSEN1-223ENST00000557511 FAT1Q14517 4588 aa5.26□□□□□ -1.57
PSEN1-223ENST00000557511 S100A1P23297 94 aa5.25□□□□□ -1.57
PSEN1-223ENST00000557511 Q6ZRP5 223 aa5.25□□□□□ -1.57
PSEN1-223ENST00000557511 FAM19A2Q8N3H0 131 aa5.25□□□□□ -1.57
PSEN1-223ENST00000557511 KRTAP17-1Q9BYP8 105 aa5.25□□□□□ -1.57
PSEN1-223ENST00000557511 ZNF22P17026 224 aaPredicted RBP5.24□□□□□ -1.57
PSEN1-223ENST00000557511 UBE2BP63146 152 aa5.24□□□□□ -1.57
PSEN1-223ENST00000557511 A0A1W2PNN7 141 aa5.23□□□□□ -1.57
PSEN1-223ENST00000557511 C11orf86A6NJI1 115 aa5.23□□□□□ -1.57
PSEN1-223ENST00000557511 FABP4P15090 132 aa5.23□□□□□ -1.57
PSEN1-223ENST00000557511 FAM19A5Q7Z5A7 132 aaPredicted RBP5.23□□□□□ -1.57
PSEN1-223ENST00000557511 MAP1LC3CQ9BXW4 147 aa5.23□□□□□ -1.57
PSEN1-223ENST00000557511 M0QXV9 152 aa5.22□□□□□ -1.57
PSEN1-223ENST00000557511 PLNP26678 52 aa5.22□□□□□ -1.57
PSEN1-223ENST00000557511 HERVK_113P61574 105 aa5.22□□□□□ -1.57
PSEN1-223ENST00000557511 LBHQ53QV2 105 aaPredicted RBP5.22□□□□□ -1.57
PSEN1-223ENST00000557511 IGLV5-39A0A0G2JS06 123 aa5.21□□□□□ -1.58
PSEN1-223ENST00000557511 PFN2P35080 140 aa5.21□□□□□ -1.58
PSEN1-223ENST00000557511 PRR3P79522 188 aaKnown RBP5.21□□□□□ -1.58
PSEN1-223ENST00000557511 PHF5AQ7RTV0 110 aaKnown RBP5.21□□□□□ -1.58
PSEN1-223ENST00000557511 XAGE1AQ9HD64 81 aa5.21□□□□□ -1.58
PSEN1-223ENST00000557511 TMEM223A0PJW6 202 aa5.2□□□□□ -1.58
PSEN1-223ENST00000557511 LINC00587B1AMM8 73 aa5.2□□□□□ -1.58
PSEN1-223ENST00000557511 HIST1H2BKO60814 126 aa5.2□□□□□ -1.58
PSEN1-223ENST00000557511 DPM2O94777 84 aa5.2□□□□□ -1.58
PSEN1-223ENST00000557511 OXTP01178 125 aa5.2□□□□□ -1.58
PSEN1-223ENST00000557511 HIST1H2BJP06899 126 aa5.2□□□□□ -1.58
PSEN1-223ENST00000557511 HIST1H2BOP23527 126 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms