RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 NTN5Q8WTR8 489 aaPredicted RBP9.57□□□□□ -0.88
ARHGEF40-208ENST00000557498 LITAFQ99732 161 aa9.57□□□□□ -0.88
ARHGEF40-208ENST00000557498 DNAH1Q9P2D7 4330 aa9.57□□□□□ -0.88
ARHGEF40-208ENST00000557498 USP17L23D6RBM5 183 aa9.56□□□□□ -0.88
ARHGEF40-208ENST00000557498 ZNF561-AS1K7EIQ3 104 aa9.56□□□□□ -0.88
ARHGEF40-208ENST00000557498 M0R2N4 97 aa9.56□□□□□ -0.88
ARHGEF40-208ENST00000557498 CIRBPQ14011 172 aaKnown RBP9.56□□□□□ -0.88
ARHGEF40-208ENST00000557498 Q6ZR54 194 aa9.56□□□□□ -0.88
ARHGEF40-208ENST00000557498 LINC00526Q96FQ7 95 aa9.56□□□□□ -0.88
ARHGEF40-208ENST00000557498 HIST1H4GQ99525 98 aa9.56□□□□□ -0.88
ARHGEF40-208ENST00000557498 M0R143 59 aa9.55□□□□□ -0.88
ARHGEF40-208ENST00000557498 PSCAO43653 123 aa9.55□□□□□ -0.88
ARHGEF40-208ENST00000557498 HINT1P49773 126 aaPredicted RBP9.55□□□□□ -0.88
ARHGEF40-208ENST00000557498 SPANXDQ9BXN6 97 aa9.55□□□□□ -0.88
ARHGEF40-208ENST00000557498 SPANXCQ9NY87 97 aa9.55□□□□□ -0.88
ARHGEF40-208ENST00000557498 F8WDY8 70 aa9.54□□□□□ -0.88
ARHGEF40-208ENST00000557498 SMIM13P0DJ93 91 aa9.54□□□□□ -0.88
ARHGEF40-208ENST00000557498 SRSF9Q13242 221 aaKnown RBP eCLIP9.54□□□□□ -0.88
ARHGEF40-208ENST00000557498 BVES-AS1Q5T3Y7 98 aa9.54□□□□□ -0.88
ARHGEF40-208ENST00000557498 C2orf48Q96LS8 159 aa9.54□□□□□ -0.88
ARHGEF40-208ENST00000557498 ERG28Q9UKR5 140 aa9.54□□□□□ -0.88
ARHGEF40-208ENST00000557498 VPS13DQ5THJ4 4388 aa9.53□□□□□ -0.88
ARHGEF40-208ENST00000557498 EREGO14944 169 aa9.53□□□□□ -0.88
ARHGEF40-208ENST00000557498 GCSHP23434 173 aa9.53□□□□□ -0.88
ARHGEF40-208ENST00000557498 ADAMTSL4-AS1Q5T5F5 129 aa9.53□□□□□ -0.88
ARHGEF40-208ENST00000557498 UNQ6190/PRO20217Q6UXQ8 127 aa9.53□□□□□ -0.88
ARHGEF40-208ENST00000557498 Q6ZRN7 208 aaPredicted RBP9.53□□□□□ -0.88
ARHGEF40-208ENST00000557498 CEND1Q8N111 149 aa9.53□□□□□ -0.88
ARHGEF40-208ENST00000557498 CAMK2N2Q96S95 79 aa9.53□□□□□ -0.88
ARHGEF40-208ENST00000557498 SNHG12Q9BXW3 62 aa9.53□□□□□ -0.88
ARHGEF40-208ENST00000557498 ALMS1Q8TCU4 4167 aa9.52□□□□□ -0.89
ARHGEF40-208ENST00000557498 A0A0U1RRA0 63 aa9.52□□□□□ -0.89
ARHGEF40-208ENST00000557498 BATFQ16520 125 aa9.52□□□□□ -0.89
ARHGEF40-208ENST00000557498 C10orf25Q5T742 122 aa9.52□□□□□ -0.89
ARHGEF40-208ENST00000557498 Q6ZVH6 145 aa9.52□□□□□ -0.89
ARHGEF40-208ENST00000557498 LECT2O14960 151 aa9.51□□□□□ -0.89
ARHGEF40-208ENST00000557498 LINC00158P58513 81 aa9.51□□□□□ -0.89
ARHGEF40-208ENST00000557498 WFDC2Q14508 124 aa9.51□□□□□ -0.89
ARHGEF40-208ENST00000557498 C6orf48Q9UBA6 75 aa9.51□□□□□ -0.89
ARHGEF40-208ENST00000557498 TRBV30A0A0K0K1B3 111 aa9.5□□□□□ -0.89
ARHGEF40-208ENST00000557498 PFN2P35080 140 aa9.5□□□□□ -0.89
ARHGEF40-208ENST00000557498 FXYD2P54710 66 aa9.5□□□□□ -0.89
ARHGEF40-208ENST00000557498 Q6ZRU5 148 aa9.5□□□□□ -0.89
ARHGEF40-208ENST00000557498 DAND5Q8N907 189 aa9.5□□□□□ -0.89
ARHGEF40-208ENST00000557498 IFITM1P13164 125 aa9.49□□□□□ -0.89
ARHGEF40-208ENST00000557498 SYCNQ0VAF6 134 aa9.49□□□□□ -0.89
ARHGEF40-208ENST00000557498 COX17Q14061 63 aa9.49□□□□□ -0.89
ARHGEF40-208ENST00000557498 MUSTN1Q8IVN3 82 aa9.49□□□□□ -0.89
ARHGEF40-208ENST00000557498 MIR7-3HGQ8N6C7 128 aa9.49□□□□□ -0.89
ARHGEF40-208ENST00000557498 LYSTQ99698 3801 aa9.49□□□□□ -0.89
ARHGEF40-208ENST00000557498 PTTG1IPP53801 180 aa9.48□□□□□ -0.89
ARHGEF40-208ENST00000557498 NPC2P61916 151 aa9.48□□□□□ -0.89
ARHGEF40-208ENST00000557498 C14orf177Q52M58 125 aa9.48□□□□□ -0.89
ARHGEF40-208ENST00000557498 C9orf116Q5BN46 136 aaPredicted RBP9.48□□□□□ -0.89
ARHGEF40-208ENST00000557498 CARD19Q96LW7 228 aa9.48□□□□□ -0.89
ARHGEF40-208ENST00000557498 DNAH6Q9C0G6 4158 aa9.47□□□□□ -0.89
ARHGEF40-208ENST00000557498 LRCOL1A6NCL2 159 aa9.47□□□□□ -0.89
ARHGEF40-208ENST00000557498 LINC00308Q8TCZ7 52 aa9.47□□□□□ -0.89
ARHGEF40-208ENST00000557498 COPS9Q8WXC6 57 aa9.47□□□□□ -0.89
ARHGEF40-208ENST00000557498 TMEM238LA0A1B0GVL6 79 aa9.46□□□□□ -0.9
ARHGEF40-208ENST00000557498 A6NJY4 79 aa9.46□□□□□ -0.9
ARHGEF40-208ENST00000557498 RPL24P83731 157 aaKnown RBP9.46□□□□□ -0.9
ARHGEF40-208ENST00000557498 C1orf134Q5TEV5 83 aa9.46□□□□□ -0.9
ARHGEF40-208ENST00000557498 SOSTDC1Q6X4U4 206 aa9.46□□□□□ -0.9
ARHGEF40-208ENST00000557498 PPDPFQ9H3Y8 114 aa9.46□□□□□ -0.9
ARHGEF40-208ENST00000557498 A6NDN8 102 aa9.45□□□□□ -0.9
ARHGEF40-208ENST00000557498 EIF4EBP3O60516 100 aaPredicted RBP9.45□□□□□ -0.9
ARHGEF40-208ENST00000557498 SLPIP03973 132 aa9.45□□□□□ -0.9
ARHGEF40-208ENST00000557498 RNF151Q2KHN1 245 aa9.45□□□□□ -0.9
ARHGEF40-208ENST00000557498 A4D1N5 150 aa9.44□□□□□ -0.9
ARHGEF40-208ENST00000557498 NHP2Q9NX24 153 aaKnown RBP9.43□□□□□ -0.9
ARHGEF40-208ENST00000557498 CNBPP62633 177 aaKnown RBP9.42□□□□□ -0.9
ARHGEF40-208ENST00000557498 COL5A1-AS1Q5SY13 56 aa9.42□□□□□ -0.9
ARHGEF40-208ENST00000557498 SND1-IT1Q9HBX3 110 aa9.42□□□□□ -0.9
ARHGEF40-208ENST00000557498 A0A087WTM6 91 aa9.41□□□□□ -0.9
ARHGEF40-208ENST00000557498 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.41□□□□□ -0.9
ARHGEF40-208ENST00000557498 LCE6AA0A183 80 aa9.41□□□□□ -0.9
ARHGEF40-208ENST00000557498 A0A1B0GWB2 263 aa9.41□□□□□ -0.9
ARHGEF40-208ENST00000557498 NDUFC2-KCTD14E9PQ53 114 aa9.41□□□□□ -0.9
ARHGEF40-208ENST00000557498 K7ERJ3 54 aa9.41□□□□□ -0.9
ARHGEF40-208ENST00000557498 LBHQ53QV2 105 aaPredicted RBP9.41□□□□□ -0.9
ARHGEF40-208ENST00000557498 TGP01266 2768 aa9.4□□□□□ -0.9
ARHGEF40-208ENST00000557498 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.4□□□□□ -0.9
ARHGEF40-208ENST00000557498 LOC107984156A0A0G2JMH3 177 aa9.4□□□□□ -0.9
ARHGEF40-208ENST00000557498 TLX1NBP0CAT3 122 aa9.4□□□□□ -0.9
ARHGEF40-208ENST00000557498 ARL17AQ8IVW1 177 aa9.4□□□□□ -0.9
ARHGEF40-208ENST00000557498 Q8N814 137 aa9.4□□□□□ -0.9
ARHGEF40-208ENST00000557498 A0A0B4J2C4 111 aa9.39□□□□□ -0.91
ARHGEF40-208ENST00000557498 CFC1BP0CG36 223 aa9.39□□□□□ -0.91
ARHGEF40-208ENST00000557498 CFC1P0CG37 223 aa9.39□□□□□ -0.91
ARHGEF40-208ENST00000557498 TENM2Q9NT68 2774 aa9.38□□□□□ -0.91
ARHGEF40-208ENST00000557498 RPL18AQ02543 176 aaKnown RBP9.37□□□□□ -0.91
ARHGEF40-208ENST00000557498 Q6ZRP5 223 aa9.37□□□□□ -0.91
ARHGEF40-208ENST00000557498 LOC107984640A0A0U1RRK4 108 aa9.36□□□□□ -0.91
ARHGEF40-208ENST00000557498 TAX1BP3O14907 124 aa9.36□□□□□ -0.91
ARHGEF40-208ENST00000557498 RTL8CO15255 209 aa9.36□□□□□ -0.91
ARHGEF40-208ENST00000557498 GAGE2EQ4V326 116 aa9.36□□□□□ -0.91
ARHGEF40-208ENST00000557498 RAB37Q96AX2 223 aa9.36□□□□□ -0.91
ARHGEF40-208ENST00000557498 XAGE1AQ9HD64 81 aa9.36□□□□□ -0.91
ARHGEF40-208ENST00000557498 GAGE2DQ9UEU5 116 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms