RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 Q6ZUT4 128 aa5.94□□□□□ -1.46
SYNE2-224ENST00000557024 HIST3H2BBQ8N257 126 aa5.94□□□□□ -1.46
SYNE2-224ENST00000557024 OPRPNQ99935 248 aaPredicted RBP5.94□□□□□ -1.46
SYNE2-224ENST00000557024 MAP1LC3CQ9BXW4 147 aa5.94□□□□□ -1.46
SYNE2-224ENST00000557024 CDC42SE2Q9NRR3 84 aa5.94□□□□□ -1.46
SYNE2-224ENST00000557024 TRAV13-1A0A0B4J241 112 aa5.93□□□□□ -1.46
SYNE2-224ENST00000557024 C5orf52A6NGY3 159 aa5.93□□□□□ -1.46
SYNE2-224ENST00000557024 IGIPA6NJ69 53 aa5.93□□□□□ -1.46
SYNE2-224ENST00000557024 IFITM10A6NMD0 228 aa5.93□□□□□ -1.46
SYNE2-224ENST00000557024 REG3AQ06141 175 aa5.93□□□□□ -1.46
SYNE2-224ENST00000557024 PMVKQ15126 192 aa5.93□□□□□ -1.46
SYNE2-224ENST00000557024 LINC00269Q8N2A0 174 aa5.93□□□□□ -1.46
SYNE2-224ENST00000557024 PACRGQ96M98 296 aaPredicted RBP5.93□□□□□ -1.46
SYNE2-224ENST00000557024 USP17L23D6RBM5 183 aa5.92□□□□□ -1.46
SYNE2-224ENST00000557024 KRTDAPP60985 99 aa5.92□□□□□ -1.46
SYNE2-224ENST00000557024 LINC01600Q96MT4 127 aa5.92□□□□□ -1.46
SYNE2-224ENST00000557024 CCL25O15444 150 aa5.91□□□□□ -1.46
SYNE2-224ENST00000557024 SEC11AP67812 179 aa5.91□□□□□ -1.46
SYNE2-224ENST00000557024 MIAQ16674 131 aa5.91□□□□□ -1.46
SYNE2-224ENST00000557024 ZC2HC1BQ5TFG8 222 aa5.91□□□□□ -1.46
SYNE2-224ENST00000557024 LINC00173Q6ZV60 143 aa5.91□□□□□ -1.46
SYNE2-224ENST00000557024 AMELXQ99217 191 aa5.91□□□□□ -1.46
SYNE2-224ENST00000557024 IGLV10-54A0A075B6I4 117 aa5.9□□□□□ -1.46
SYNE2-224ENST00000557024 TRAV8-4A0A0B4J246 113 aa5.9□□□□□ -1.46
SYNE2-224ENST00000557024 LINC00959A0A1B0GUT2 108 aa5.9□□□□□ -1.46
SYNE2-224ENST00000557024 C20orf202A1L168 122 aa5.9□□□□□ -1.46
SYNE2-224ENST00000557024 ENHOQ6UWT2 76 aa5.9□□□□□ -1.46
SYNE2-224ENST00000557024 SDIM1Q6ZPB5 146 aa5.9□□□□□ -1.46
SYNE2-224ENST00000557024 C9orf163Q8N9P6 203 aa5.9□□□□□ -1.46
SYNE2-224ENST00000557024 HIST1H2BLQ99880 126 aa5.9□□□□□ -1.46
SYNE2-224ENST00000557024 KRTAP4-11Q9BYQ6 195 aa5.9□□□□□ -1.46
SYNE2-224ENST00000557024 CST9LQ9H4G1 147 aa5.9□□□□□ -1.46
SYNE2-224ENST00000557024 GEMIN7Q9H840 131 aaKnown RBP5.9□□□□□ -1.46
SYNE2-224ENST00000557024 CHTOPQ9Y3Y2 248 aaKnown RBP5.9□□□□□ -1.46
SYNE2-224ENST00000557024 TRAV12-1A0A0B4J245 112 aa5.89□□□□□ -1.47
SYNE2-224ENST00000557024 SYS1-DBNDD2H3BUS1 97 aa5.89□□□□□ -1.47
SYNE2-224ENST00000557024 C3orf79P0CE67 100 aa5.89□□□□□ -1.47
SYNE2-224ENST00000557024 PET117Q6UWS5 81 aa5.89□□□□□ -1.47
SYNE2-224ENST00000557024 OR10D4PQ8NGN7 298 aa5.89□□□□□ -1.47
SYNE2-224ENST00000557024 CHCHD10Q8WYQ3 142 aaPredicted RBP5.89□□□□□ -1.47
SYNE2-224ENST00000557024 DPH3Q96FX2 82 aa5.89□□□□□ -1.47
SYNE2-224ENST00000557024 PRR34Q9NV39 138 aa5.89□□□□□ -1.47
SYNE2-224ENST00000557024 A0A0J9YXV3 536 aa5.88□□□□□ -1.47
SYNE2-224ENST00000557024 F8VRH5 84 aa5.88□□□□□ -1.47
SYNE2-224ENST00000557024 XCL1P47992 114 aa5.88□□□□□ -1.47
SYNE2-224ENST00000557024 UBE2D1P51668 147 aa5.88□□□□□ -1.47
SYNE2-224ENST00000557024 HERVK_113P63121 156 aa5.88□□□□□ -1.47
SYNE2-224ENST00000557024 FAM104AQ969W3 186 aa5.88□□□□□ -1.47
SYNE2-224ENST00000557024 A0A087WYN8 130 aa5.87□□□□□ -1.47
SYNE2-224ENST00000557024 TINCRA0A1B0GVN0 87 aa5.87□□□□□ -1.47
SYNE2-224ENST00000557024 CHTF8P0CG12 524 aa5.87□□□□□ -1.47
SYNE2-224ENST00000557024 AKR1D1P51857 326 aa5.87□□□□□ -1.47
SYNE2-224ENST00000557024 KRTAP10-8P60410 259 aa5.87□□□□□ -1.47
SYNE2-224ENST00000557024 CIRBPQ14011 172 aaKnown RBP5.87□□□□□ -1.47
SYNE2-224ENST00000557024 CD164L2Q6UWJ8 174 aa5.87□□□□□ -1.47
SYNE2-224ENST00000557024 H3BRM9 83 aa5.86□□□□□ -1.47
SYNE2-224ENST00000557024 SCGB1D1O95968 90 aa5.86□□□□□ -1.47
SYNE2-224ENST00000557024 IGKCP01834 107 aa5.86□□□□□ -1.47
SYNE2-224ENST00000557024 TMEM170BQ5T4T1 132 aa5.86□□□□□ -1.47
SYNE2-224ENST00000557024 LINC00242Q5T6M2 205 aa5.86□□□□□ -1.47
SYNE2-224ENST00000557024 C5orf38Q86SI9 138 aa5.86□□□□□ -1.47
SYNE2-224ENST00000557024 LINC00469Q8N7U9 141 aa5.86□□□□□ -1.47
SYNE2-224ENST00000557024 PMCHL2Q9BQD1 86 aa5.86□□□□□ -1.47
SYNE2-224ENST00000557024 MRPL35Q9NZE8 188 aaKnown RBP5.86□□□□□ -1.47
SYNE2-224ENST00000557024 COX7A2LO14548 114 aa5.85□□□□□ -1.47
SYNE2-224ENST00000557024 DPM2O94777 84 aa5.85□□□□□ -1.47
SYNE2-224ENST00000557024 APOMO95445 188 aa5.85□□□□□ -1.47
SYNE2-224ENST00000557024 IGLC3P0DOY3 106 aa5.85□□□□□ -1.47
SYNE2-224ENST00000557024 PLNP26678 52 aa5.85□□□□□ -1.47
SYNE2-224ENST00000557024 LCE5AQ5TCM9 118 aa5.85□□□□□ -1.47
SYNE2-224ENST00000557024 LINC01545Q5VT33 79 aa5.85□□□□□ -1.47
SYNE2-224ENST00000557024 CFAP161Q6P656 301 aa5.85□□□□□ -1.47
SYNE2-224ENST00000557024 C7orf33Q8WU49 177 aa5.85□□□□□ -1.47
SYNE2-224ENST00000557024 IGLV4-69A0A075B6H9 119 aa5.84□□□□□ -1.47
SYNE2-224ENST00000557024 C11orf86A6NJI1 115 aa5.84□□□□□ -1.47
SYNE2-224ENST00000557024 HERVK_113P61574 105 aa5.84□□□□□ -1.47
SYNE2-224ENST00000557024 PRR3P79522 188 aaKnown RBP5.84□□□□□ -1.47
SYNE2-224ENST00000557024 COX6A2Q02221 97 aa5.84□□□□□ -1.47
SYNE2-224ENST00000557024 FAM19A3Q7Z5A8 133 aa5.84□□□□□ -1.47
SYNE2-224ENST00000557024 SPACA4Q8TDM5 124 aa5.84□□□□□ -1.47
SYNE2-224ENST00000557024 IGHV3-64A0A075B6Q5 118 aa5.83□□□□□ -1.48
SYNE2-224ENST00000557024 HSBP1L1C9JCN9 74 aa5.83□□□□□ -1.48
SYNE2-224ENST00000557024 ZNF22P17026 224 aaPredicted RBP5.83□□□□□ -1.48
SYNE2-224ENST00000557024 FOXI1Q12951 378 aa5.83□□□□□ -1.48
SYNE2-224ENST00000557024 PLAC8Q9NZF1 115 aa5.83□□□□□ -1.48
SYNE2-224ENST00000557024 CDKN2A-AS1Q9UH64 79 aa5.83□□□□□ -1.48
SYNE2-224ENST00000557024 LPAP08519 4548 aa5.82□□□□□ -1.48
SYNE2-224ENST00000557024 A0A087WZ39 114 aa5.82□□□□□ -1.48
SYNE2-224ENST00000557024 IGHV3OR16-9A0A0B4J2B5 98 aa5.82□□□□□ -1.48
SYNE2-224ENST00000557024 IGHV1-58A0A0C4DH39 117 aa5.82□□□□□ -1.48
SYNE2-224ENST00000557024 PRSS2P07478 247 aa5.82□□□□□ -1.48
SYNE2-224ENST00000557024 CNBPP62633 177 aaKnown RBP5.82□□□□□ -1.48
SYNE2-224ENST00000557024 REG3GQ6UW15 175 aa5.82□□□□□ -1.48
SYNE2-224ENST00000557024 LINC01561Q8N1V8 128 aa5.82□□□□□ -1.48
SYNE2-224ENST00000557024 TOMM7Q9P0U1 55 aa5.82□□□□□ -1.48
SYNE2-224ENST00000557024 hDV102S1A0JD36 115 aa5.81□□□□□ -1.48
SYNE2-224ENST00000557024 SPINK8P0C7L1 97 aa5.81□□□□□ -1.48
SYNE2-224ENST00000557024 JOSD1Q15040 202 aaPredicted RBP5.81□□□□□ -1.48
SYNE2-224ENST00000557024 KRTAP26-1Q6PEX3 210 aa5.81□□□□□ -1.48
SYNE2-224ENST00000557024 ATOH7Q8N100 152 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms