RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 CST9LQ9H4G1 147 aa11.18□□□□□ -0.62
XRCC3-217ENST00000556980 TINCRA0A1B0GVN0 87 aa11.17□□□□□ -0.62
XRCC3-217ENST00000556980 PMVKQ15126 192 aa11.17□□□□□ -0.62
XRCC3-217ENST00000556980 NDUFC2-KCTD14E9PQ53 114 aa11.16□□□□□ -0.62
XRCC3-217ENST00000556980 LINC00614P0C842 121 aa11.16□□□□□ -0.62
XRCC3-217ENST00000556980 FAM168BA1KXE4 195 aa11.15□□□□□ -0.62
XRCC3-217ENST00000556980 PHF5AQ7RTV0 110 aaKnown RBP11.15□□□□□ -0.62
XRCC3-217ENST00000556980 FAM19A5Q7Z5A7 132 aaPredicted RBP11.15□□□□□ -0.62
XRCC3-217ENST00000556980 IGLV5-45A0A087WSX0 123 aa11.14□□□□□ -0.63
XRCC3-217ENST00000556980 SMIM1B2RUZ4 78 aa11.14□□□□□ -0.63
XRCC3-217ENST00000556980 HBDP02042 147 aa11.14□□□□□ -0.63
XRCC3-217ENST00000556980 RAB5BP61020 215 aa11.14□□□□□ -0.63
XRCC3-217ENST00000556980 URB1-AS1Q96HZ7 61 aa11.14□□□□□ -0.63
XRCC3-217ENST00000556980 A0A096LNJ9 63 aa11.13□□□□□ -0.63
XRCC3-217ENST00000556980 F8VRH5 84 aa11.13□□□□□ -0.63
XRCC3-217ENST00000556980 NDUFA6P56556 154 aa11.13□□□□□ -0.63
XRCC3-217ENST00000556980 PDZD11Q5EBL8 140 aa11.13□□□□□ -0.63
XRCC3-217ENST00000556980 YPEL4Q96NS1 127 aa11.13□□□□□ -0.63
XRCC3-217ENST00000556980 LRP1Q07954 4544 aaKnown RBP11.13□□□□□ -0.63
XRCC3-217ENST00000556980 CXCL5P42830 114 aa11.12□□□□□ -0.63
XRCC3-217ENST00000556980 PMCHL1Q16048 86 aa11.12□□□□□ -0.63
XRCC3-217ENST00000556980 SPINK6Q6UWN8 80 aa11.12□□□□□ -0.63
XRCC3-217ENST00000556980 COX7B2Q8TF08 81 aa11.11□□□□□ -0.63
XRCC3-217ENST00000556980 PSORS1C2Q9UIG4 136 aa11.11□□□□□ -0.63
XRCC3-217ENST00000556980 PKHD1L1Q86WI1 4243 aa11.11□□□□□ -0.63
XRCC3-217ENST00000556980 H3BRM9 83 aa11.1□□□□□ -0.63
XRCC3-217ENST00000556980 SPINK8P0C7L1 97 aa11.1□□□□□ -0.63
XRCC3-217ENST00000556980 CBLN2Q8IUK8 224 aa11.1□□□□□ -0.63
XRCC3-217ENST00000556980 M0QXV9 152 aa11.09□□□□□ -0.63
XRCC3-217ENST00000556980 ATP5LO75964 103 aa11.09□□□□□ -0.63
XRCC3-217ENST00000556980 C9orf129Q5T035 196 aaKnown RBP11.09□□□□□ -0.63
XRCC3-217ENST00000556980 MT1HL1P0DM35 61 aa11.08□□□□□ -0.64
XRCC3-217ENST00000556980 IGLC3P0DOY3 106 aa11.08□□□□□ -0.64
XRCC3-217ENST00000556980 C1orf137Q5JT78 98 aa11.08□□□□□ -0.64
XRCC3-217ENST00000556980 SERTAD4-AS1Q5TG53 156 aa11.08□□□□□ -0.64
XRCC3-217ENST00000556980 REG3GQ6UW15 175 aa11.08□□□□□ -0.64
XRCC3-217ENST00000556980 SRSF9Q13242 221 aaKnown RBP eCLIP11.07□□□□□ -0.64
XRCC3-217ENST00000556980 KRTAP7-1Q8IUC3 87 aa11.07□□□□□ -0.64
XRCC3-217ENST00000556980 FAT3Q8TDW7 4589 aa11.06□□□□□ -0.64
XRCC3-217ENST00000556980 UBE2BP63146 152 aa11.06□□□□□ -0.64
XRCC3-217ENST00000556980 SLC7A5P1Q8MH63 180 aa11.06□□□□□ -0.64
XRCC3-217ENST00000556980 CHCHD1Q96BP2 118 aaKnown RBP11.06□□□□□ -0.64
XRCC3-217ENST00000556980 XAGE1AQ9HD64 81 aa11.06□□□□□ -0.64
XRCC3-217ENST00000556980 BAGE3Q86Y29 109 aa11.04□□□□□ -0.64
XRCC3-217ENST00000556980 LINC01600Q96MT4 127 aa11.04□□□□□ -0.64
XRCC3-217ENST00000556980 ZNF22P17026 224 aaPredicted RBP11.03□□□□□ -0.64
XRCC3-217ENST00000556980 KRTAP11-1Q8IUC1 163 aa11.03□□□□□ -0.64
XRCC3-217ENST00000556980 IGLV5-39A0A0G2JS06 123 aa11.01□□□□□ -0.65
XRCC3-217ENST00000556980 IGLV7-43P04211 117 aa11.01□□□□□ -0.65
XRCC3-217ENST00000556980 C11orf86A6NJI1 115 aa11□□□□□ -0.65
XRCC3-217ENST00000556980 TMEM170BQ5T4T1 132 aa11□□□□□ -0.65
XRCC3-217ENST00000556980 CHTOPQ9Y3Y2 248 aaKnown RBP11□□□□□ -0.65
XRCC3-217ENST00000556980 HSBP1O75506 76 aa10.99□□□□□ -0.65
XRCC3-217ENST00000556980 TRGC2P03986 189 aa10.99□□□□□ -0.65
XRCC3-217ENST00000556980 LBHQ53QV2 105 aaPredicted RBP10.99□□□□□ -0.65
XRCC3-217ENST00000556980 IFI27L1Q96BM0 104 aa10.99□□□□□ -0.65
XRCC3-217ENST00000556980 C22orf24Q9Y442 160 aa10.99□□□□□ -0.65
XRCC3-217ENST00000556980 DIRC1Q969H9 104 aa10.98□□□□□ -0.65
XRCC3-217ENST00000556980 PLA2G2DQ9UNK4 145 aa10.97□□□□□ -0.65
XRCC3-217ENST00000556980 TRAV12-1A0A0B4J245 112 aa10.96□□□□□ -0.65
XRCC3-217ENST00000556980 TP73-AS1Q9UF72 201 aa10.96□□□□□ -0.65
XRCC3-217ENST00000556980 PFN2P35080 140 aa10.95□□□□□ -0.66
XRCC3-217ENST00000556980 MRPL55Q7Z7F7 128 aaKnown RBP10.95□□□□□ -0.66
XRCC3-217ENST00000556980 FAM19A2Q8N3H0 131 aa10.95□□□□□ -0.66
XRCC3-217ENST00000556980 ODF1Q14990 250 aa10.94□□□□□ -0.66
XRCC3-217ENST00000556980 SFTA2Q6UW10 78 aa10.94□□□□□ -0.66
XRCC3-217ENST00000556980 H0Y9J4 135 aa10.93□□□□□ -0.66
XRCC3-217ENST00000556980 ERG28Q9UKR5 140 aa10.93□□□□□ -0.66
XRCC3-217ENST00000556980 NUPR1O60356 82 aa10.92□□□□□ -0.66
XRCC3-217ENST00000556980 SERF1AO75920 110 aa10.92□□□□□ -0.66
XRCC3-217ENST00000556980 KRTAP10-8P60410 259 aa10.92□□□□□ -0.66
XRCC3-217ENST00000556980 ZNF625Q96I27 306 aaPredicted RBP10.92□□□□□ -0.66
XRCC3-217ENST00000556980 HMCN2Q8NDA2 5059 aa10.91□□□□□ -0.66
XRCC3-217ENST00000556980 COLCA2A8K830 154 aa10.91□□□□□ -0.66
XRCC3-217ENST00000556980 NKAPP1Q8N9T2 125 aa10.91□□□□□ -0.66
XRCC3-217ENST00000556980 TMEM223A0PJW6 202 aa10.9□□□□□ -0.66
XRCC3-217ENST00000556980 GAGE10A6NGK3 116 aa10.9□□□□□ -0.66
XRCC3-217ENST00000556980 H0Y8G0 127 aa10.9□□□□□ -0.66
XRCC3-217ENST00000556980 COX17Q14061 63 aa10.9□□□□□ -0.66
XRCC3-217ENST00000556980 IGLV5-37A0A075B6J1 123 aa10.89□□□□□ -0.67
XRCC3-217ENST00000556980 RPL37AP8A6NKH3 93 aa10.89□□□□□ -0.67
XRCC3-217ENST00000556980 LEPROTL1O95214 131 aa10.89□□□□□ -0.67
XRCC3-217ENST00000556980 LINC00167Q96N53 147 aa10.89□□□□□ -0.67
XRCC3-217ENST00000556980 SND1-IT1Q9HBX3 110 aa10.89□□□□□ -0.67
XRCC3-217ENST00000556980 LINC00310P59036 64 aa10.88□□□□□ -0.67
XRCC3-217ENST00000556980 HSPB8Q9UJY1 196 aa10.87□□□□□ -0.67
XRCC3-217ENST00000556980 ZNF861PO60384 105 aa10.86□□□□□ -0.67
XRCC3-217ENST00000556980 BCE1O60756 84 aa10.86□□□□□ -0.67
XRCC3-217ENST00000556980 LINC00158P58513 81 aa10.85□□□□□ -0.67
XRCC3-217ENST00000556980 PRR26Q8N8Z3 221 aa10.85□□□□□ -0.67
XRCC3-217ENST00000556980 FABP4P15090 132 aa10.84□□□□□ -0.67
XRCC3-217ENST00000556980 RPL28P46779 137 aaKnown RBP10.84□□□□□ -0.67
XRCC3-217ENST00000556980 RPL24P83731 157 aaKnown RBP10.84□□□□□ -0.67
XRCC3-217ENST00000556980 SCO1O75880 301 aa10.83□□□□□ -0.68
XRCC3-217ENST00000556980 VPREB1P12018 145 aa10.83□□□□□ -0.68
XRCC3-217ENST00000556980 PLNP26678 52 aa10.83□□□□□ -0.68
XRCC3-217ENST00000556980 IGLV1-50A0A075B6I6 118 aa10.81□□□□□ -0.68
XRCC3-217ENST00000556980 IGKV2-28A0A075B6P5 120 aa10.81□□□□□ -0.68
XRCC3-217ENST00000556980 A0A0U1RRA0 63 aa10.81□□□□□ -0.68
XRCC3-217ENST00000556980 ATP6V1G1O75348 118 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms