RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 LINC01559Q495D7 138 aa6.19□□□□□ -1.42
ABCD4-226ENST00000556971 MRPL55Q7Z7F7 128 aaKnown RBP6.19□□□□□ -1.42
ABCD4-226ENST00000556971 TRBV24-1A0A075B6N3 115 aa6.18□□□□□ -1.42
ABCD4-226ENST00000556971 HIGD1CA8MV81 97 aa6.18□□□□□ -1.42
ABCD4-226ENST00000556971 OR5AL1P0C617 328 aa6.18□□□□□ -1.42
ABCD4-226ENST00000556971 ZNF25P17030 456 aaPredicted RBP6.18□□□□□ -1.42
ABCD4-226ENST00000556971 RPS20P60866 119 aaKnown RBP6.18□□□□□ -1.42
ABCD4-226ENST00000556971 PRLHP81277 87 aa6.18□□□□□ -1.42
ABCD4-226ENST00000556971 SPANXN1Q5VSR9 72 aa6.18□□□□□ -1.42
ABCD4-226ENST00000556971 ORAOV1Q8WV07 137 aa6.18□□□□□ -1.42
ABCD4-226ENST00000556971 TMEM101Q96IK0 257 aa6.18□□□□□ -1.42
ABCD4-226ENST00000556971 BTF3L4Q96K17 158 aa6.18□□□□□ -1.42
ABCD4-226ENST00000556971 NAT8BQ9UHF3 227 aa6.18□□□□□ -1.42
ABCD4-226ENST00000556971 RAB5AP20339 215 aa6.17□□□□□ -1.42
ABCD4-226ENST00000556971 PACRGQ96M98 296 aaPredicted RBP6.17□□□□□ -1.42
ABCD4-226ENST00000556971 AP1S3Q96PC3 154 aa6.17□□□□□ -1.42
ABCD4-226ENST00000556971 H7C423 109 aa6.16□□□□□ -1.42
ABCD4-226ENST00000556971 MRPL54Q6P161 138 aaKnown RBP6.16□□□□□ -1.42
ABCD4-226ENST00000556971 RASL11AQ6T310 242 aa6.16□□□□□ -1.42
ABCD4-226ENST00000556971 OR10D4PQ8NGN7 298 aa6.16□□□□□ -1.42
ABCD4-226ENST00000556971 TPPP3Q9BW30 176 aa6.16□□□□□ -1.42
ABCD4-226ENST00000556971 NDUFC2-KCTD14E9PQ53 114 aa6.15□□□□□ -1.42
ABCD4-226ENST00000556971 FOXA3P55318 350 aaPredicted RBP6.15□□□□□ -1.42
ABCD4-226ENST00000556971 LYZL1Q6UWQ5 148 aa6.15□□□□□ -1.42
ABCD4-226ENST00000556971 ATP5L2Q7Z4Y8 100 aa6.15□□□□□ -1.42
ABCD4-226ENST00000556971 BORCS7Q96B45 105 aa6.15□□□□□ -1.42
ABCD4-226ENST00000556971 PLEKHB2Q96CS7 222 aa6.15□□□□□ -1.42
ABCD4-226ENST00000556971 GAGE10A6NGK3 116 aa6.14□□□□□ -1.43
ABCD4-226ENST00000556971 F8WDY8 70 aa6.14□□□□□ -1.43
ABCD4-226ENST00000556971 APCSP02743 223 aa6.14□□□□□ -1.43
ABCD4-226ENST00000556971 IGLC6P0CF74 106 aa6.14□□□□□ -1.43
ABCD4-226ENST00000556971 RPL37P61927 97 aaKnown RBP6.14□□□□□ -1.43
ABCD4-226ENST00000556971 RPS29P62273 56 aaKnown RBP6.14□□□□□ -1.43
ABCD4-226ENST00000556971 COX19Q49B96 90 aa6.14□□□□□ -1.43
ABCD4-226ENST00000556971 LINC00469Q8N7U9 141 aa6.14□□□□□ -1.43
ABCD4-226ENST00000556971 TMA7Q9Y2S6 64 aaKnown RBP6.14□□□□□ -1.43
ABCD4-226ENST00000556971 A0A1B0GUT8 65 aa6.13□□□□□ -1.43
ABCD4-226ENST00000556971 A0A1B0GXF2 115 aa6.13□□□□□ -1.43
ABCD4-226ENST00000556971 HBBP68871 147 aa6.13□□□□□ -1.43
ABCD4-226ENST00000556971 RIGQ13278 110 aa6.13□□□□□ -1.43
ABCD4-226ENST00000556971 LINC00167Q96N53 147 aa6.13□□□□□ -1.43
ABCD4-226ENST00000556971 NIT2Q9NQR4 276 aa6.13□□□□□ -1.43
ABCD4-226ENST00000556971 TP73-AS1Q9UF72 201 aa6.13□□□□□ -1.43
ABCD4-226ENST00000556971 A0A1B0GW15 77 aa6.12□□□□□ -1.43
ABCD4-226ENST00000556971 C1orf196B1AJZ1 125 aa6.12□□□□□ -1.43
ABCD4-226ENST00000556971 F2Z2F3 143 aa6.12□□□□□ -1.43
ABCD4-226ENST00000556971 SNAI2O43623 268 aa6.12□□□□□ -1.43
ABCD4-226ENST00000556971 TRGC2P03986 189 aa6.12□□□□□ -1.43
ABCD4-226ENST00000556971 TMEM136Q6ZRR5 245 aa6.12□□□□□ -1.43
ABCD4-226ENST00000556971 GNB1LQ9BYB4 327 aa6.12□□□□□ -1.43
ABCD4-226ENST00000556971 TRAPPC1Q9Y5R8 145 aa6.12□□□□□ -1.43
ABCD4-226ENST00000556971 S100A8P05109 93 aa6.11□□□□□ -1.43
ABCD4-226ENST00000556971 RAB5BP61020 215 aa6.11□□□□□ -1.43
ABCD4-226ENST00000556971 CNFNQ9BYD5 112 aa6.11□□□□□ -1.43
ABCD4-226ENST00000556971 MRPL18Q9H0U6 180 aaKnown RBP6.11□□□□□ -1.43
ABCD4-226ENST00000556971 XAGE1AQ9HD64 81 aa6.11□□□□□ -1.43
ABCD4-226ENST00000556971 CDC42SE2Q9NRR3 84 aa6.11□□□□□ -1.43
ABCD4-226ENST00000556971 FABP9Q0Z7S8 132 aa6.1□□□□□ -1.43
ABCD4-226ENST00000556971 TWIST1Q15672 202 aa6.1□□□□□ -1.43
ABCD4-226ENST00000556971 GATD1Q8NB37 220 aa6.1□□□□□ -1.43
ABCD4-226ENST00000556971 TRAV13-1A0A0B4J241 112 aa6.09□□□□□ -1.43
ABCD4-226ENST00000556971 IGLV6-57P01721 117 aa6.09□□□□□ -1.43
ABCD4-226ENST00000556971 C20orf202A1L168 122 aa6.08□□□□□ -1.44
ABCD4-226ENST00000556971 NCR2O95944 276 aa6.08□□□□□ -1.44
ABCD4-226ENST00000556971 TRGC1P0CF51 173 aa6.08□□□□□ -1.44
ABCD4-226ENST00000556971 RNASE13Q5GAN3 156 aaKnown RBP6.08□□□□□ -1.44
ABCD4-226ENST00000556971 SPRR4Q96PI1 79 aa6.08□□□□□ -1.44
ABCD4-226ENST00000556971 HIST1H2BKO60814 126 aa6.07□□□□□ -1.44
ABCD4-226ENST00000556971 HIST1H2BJP06899 126 aa6.07□□□□□ -1.44
ABCD4-226ENST00000556971 HIST1H2BOP23527 126 aa6.07□□□□□ -1.44
ABCD4-226ENST00000556971 HIST1H2BBP33778 126 aa6.07□□□□□ -1.44
ABCD4-226ENST00000556971 HIST1H2BDP58876 126 aa6.07□□□□□ -1.44
ABCD4-226ENST00000556971 HIST1H2BCP62807 126 aa6.07□□□□□ -1.44
ABCD4-226ENST00000556971 HIST2H2BEQ16778 126 aa6.07□□□□□ -1.44
ABCD4-226ENST00000556971 KIAA1644Q3SXP7 199 aa6.07□□□□□ -1.44
ABCD4-226ENST00000556971 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.07□□□□□ -1.44
ABCD4-226ENST00000556971 SMIM15Q7Z3B0 74 aa6.07□□□□□ -1.44
ABCD4-226ENST00000556971 FAM19A1Q7Z5A9 133 aa6.07□□□□□ -1.44
ABCD4-226ENST00000556971 HIST1H2BHQ93079 126 aa6.07□□□□□ -1.44
ABCD4-226ENST00000556971 HIST1H2BNQ99877 126 aa6.07□□□□□ -1.44
ABCD4-226ENST00000556971 HIST1H2BMQ99879 126 aa6.07□□□□□ -1.44
ABCD4-226ENST00000556971 TMEM191AQ9H0A3 160 aa6.07□□□□□ -1.44
ABCD4-226ENST00000556971 TRBV30A0A0K0K1B3 111 aa6.06□□□□□ -1.44
ABCD4-226ENST00000556971 FAM104BQ5XKR9 115 aa6.06□□□□□ -1.44
ABCD4-226ENST00000556971 C2orf82Q6UX34 121 aa6.06□□□□□ -1.44
ABCD4-226ENST00000556971 AMN1Q8IY45 258 aa6.06□□□□□ -1.44
ABCD4-226ENST00000556971 A6NN06 94 aa6.05□□□□□ -1.44
ABCD4-226ENST00000556971 S100A6P06703 90 aa6.05□□□□□ -1.44
ABCD4-226ENST00000556971 RAB4AP20338 218 aa6.04□□□□□ -1.44
ABCD4-226ENST00000556971 NDUFA6P56556 154 aa6.04□□□□□ -1.44
ABCD4-226ENST00000556971 MRPL51Q4U2R6 128 aaKnown RBP6.04□□□□□ -1.44
ABCD4-226ENST00000556971 C20orf166-AS1Q96NR2 134 aa6.04□□□□□ -1.44
ABCD4-226ENST00000556971 ALKBH7Q9BT30 221 aaPredicted RBP6.04□□□□□ -1.44
ABCD4-226ENST00000556971 D6R8Y8 96 aa6.03□□□□□ -1.44
ABCD4-226ENST00000556971 CKS2P33552 79 aa6.03□□□□□ -1.44
ABCD4-226ENST00000556971 RPL32P62910 135 aaKnown RBP6.03□□□□□ -1.44
ABCD4-226ENST00000556971 ORMDL3Q8N138 153 aa6.03□□□□□ -1.44
ABCD4-226ENST00000556971 HIGD2AQ9BW72 106 aa6.03□□□□□ -1.44
ABCD4-226ENST00000556971 IGKV2-28A0A075B6P5 120 aa6.02□□□□□ -1.45
ABCD4-226ENST00000556971 SMKR1H3BMG3 65 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 182 ms