RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 C7orf77A4D0Y5 90 aa3.19□□□□□ -1.9
ATXN3-245ENST00000556958 SRP19P09132 144 aaKnown RBP3.19□□□□□ -1.9
ATXN3-245ENST00000556958 PNRC1Q12796 327 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-245ENST00000556958 UBE2V1Q13404 147 aa3.19□□□□□ -1.9
ATXN3-245ENST00000556958 TMEM241Q24JQ0 296 aa3.19□□□□□ -1.9
ATXN3-245ENST00000556958 LINC00242Q5T6M2 205 aa3.19□□□□□ -1.9
ATXN3-245ENST00000556958 RNASEKQ6P5S7 137 aaKnown RBP3.19□□□□□ -1.9
ATXN3-245ENST00000556958 CD164L2Q6UWJ8 174 aa3.19□□□□□ -1.9
ATXN3-245ENST00000556958 LYZL1Q6UWQ5 148 aa3.19□□□□□ -1.9
ATXN3-245ENST00000556958 C11orf52Q96A22 123 aa3.19□□□□□ -1.9
ATXN3-245ENST00000556958 BORCS7Q96B45 105 aa3.19□□□□□ -1.9
ATXN3-245ENST00000556958 BTF3L4Q96K17 158 aa3.19□□□□□ -1.9
ATXN3-245ENST00000556958 OPRPNQ99935 248 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-245ENST00000556958 RPS10P5Q9NQ39 176 aa3.19□□□□□ -1.9
ATXN3-245ENST00000556958 NDUFA12Q9UI09 145 aa3.19□□□□□ -1.9
ATXN3-245ENST00000556958 LINC00959A0A1B0GUT2 108 aa3.18□□□□□ -1.9
ATXN3-245ENST00000556958 A8MWL6 223 aa3.18□□□□□ -1.9
ATXN3-245ENST00000556958 F2Z2F3 143 aa3.18□□□□□ -1.9
ATXN3-245ENST00000556958 TMEM250H0YL14 139 aa3.18□□□□□ -1.9
ATXN3-245ENST00000556958 H7C423 109 aa3.18□□□□□ -1.9
ATXN3-245ENST00000556958 K7EN84 100 aa3.18□□□□□ -1.9
ATXN3-245ENST00000556958 RAB5AP20339 215 aa3.18□□□□□ -1.9
ATXN3-245ENST00000556958 NTF3P20783 257 aa3.18□□□□□ -1.9
ATXN3-245ENST00000556958 AKR1D1P51857 326 aa3.18□□□□□ -1.9
ATXN3-245ENST00000556958 ADIRFQ15847 76 aa3.18□□□□□ -1.9
ATXN3-245ENST00000556958 SMIM15Q7Z3B0 74 aa3.18□□□□□ -1.9
ATXN3-245ENST00000556958 COX8CQ7Z4L0 72 aa3.18□□□□□ -1.9
ATXN3-245ENST00000556958 CBLN2Q8IUK8 224 aa3.18□□□□□ -1.9
ATXN3-245ENST00000556958 TMEM101Q96IK0 257 aa3.18□□□□□ -1.9
ATXN3-245ENST00000556958 TRBV20OR9-2A0A075B6H5 130 aa3.17□□□□□ -1.9
ATXN3-245ENST00000556958 F8WDY8 70 aa3.17□□□□□ -1.9
ATXN3-245ENST00000556958 M0QY20 66 aa3.17□□□□□ -1.9
ATXN3-245ENST00000556958 COX7A2LO14548 114 aa3.17□□□□□ -1.9
ATXN3-245ENST00000556958 OR5AL1P0C617 328 aa3.17□□□□□ -1.9
ATXN3-245ENST00000556958 TRGC1P0CF51 173 aa3.17□□□□□ -1.9
ATXN3-245ENST00000556958 LBHQ53QV2 105 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-245ENST00000556958 SMIM12Q96EX1 92 aa3.17□□□□□ -1.9
ATXN3-245ENST00000556958 YPEL4Q96NS1 127 aa3.17□□□□□ -1.9
ATXN3-245ENST00000556958 MRPL35Q9NZE8 188 aaKnown RBP3.17□□□□□ -1.9
ATXN3-245ENST00000556958 C9JQL5 133 aa3.16□□□□□ -1.9
ATXN3-245ENST00000556958 SNAI2O43623 268 aa3.16□□□□□ -1.9
ATXN3-245ENST00000556958 BCE1O60756 84 aa3.16□□□□□ -1.9
ATXN3-245ENST00000556958 TLX1NBP0CAT3 122 aa3.16□□□□□ -1.9
ATXN3-245ENST00000556958 VPREB1P12018 145 aa3.16□□□□□ -1.9
ATXN3-245ENST00000556958 ZNF25P17030 456 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-245ENST00000556958 S100A2P29034 98 aa3.16□□□□□ -1.9
ATXN3-245ENST00000556958 SNRPEP62304 92 aaKnown RBP3.16□□□□□ -1.9
ATXN3-245ENST00000556958 GAGE2EQ4V326 116 aa3.16□□□□□ -1.9
ATXN3-245ENST00000556958 AP1S3Q96PC3 154 aa3.16□□□□□ -1.9
ATXN3-245ENST00000556958 NIT2Q9NQR4 276 aa3.16□□□□□ -1.9
ATXN3-245ENST00000556958 GAGE2DQ9UEU5 116 aa3.16□□□□□ -1.9
ATXN3-245ENST00000556958 NAT8Q9UHE5 227 aa3.16□□□□□ -1.9
ATXN3-245ENST00000556958 TRBV24-1A0A075B6N3 115 aa3.15□□□□□ -1.91
ATXN3-245ENST00000556958 PCP4L1A6NKN8 68 aa3.15□□□□□ -1.91
ATXN3-245ENST00000556958 CXCL1P09341 107 aa3.15□□□□□ -1.91
ATXN3-245ENST00000556958 IGLC6P0CF74 106 aa3.15□□□□□ -1.91
ATXN3-245ENST00000556958 FOXA3P55318 350 aaPredicted RBP3.15□□□□□ -1.91
ATXN3-245ENST00000556958 RPL23P62829 140 aaKnown RBP3.15□□□□□ -1.91
ATXN3-245ENST00000556958 FABP9Q0Z7S8 132 aa3.15□□□□□ -1.91
ATXN3-245ENST00000556958 RIGQ13278 110 aa3.15□□□□□ -1.91
ATXN3-245ENST00000556958 PCOTHQ58A44 107 aa3.15□□□□□ -1.91
ATXN3-245ENST00000556958 RASL11AQ6T310 242 aa3.15□□□□□ -1.91
ATXN3-245ENST00000556958 LINC01551Q86U37 167 aa3.15□□□□□ -1.91
ATXN3-245ENST00000556958 OSTCQ9NRP0 149 aa3.15□□□□□ -1.91
ATXN3-245ENST00000556958 A0A1B0GUT8 65 aa3.14□□□□□ -1.91
ATXN3-245ENST00000556958 HIGD1CA8MV81 97 aa3.14□□□□□ -1.91
ATXN3-245ENST00000556958 PPP1R2P9O14990 202 aa3.14□□□□□ -1.91
ATXN3-245ENST00000556958 NDUFA1O15239 70 aa3.14□□□□□ -1.91
ATXN3-245ENST00000556958 NCR2O95944 276 aa3.14□□□□□ -1.91
ATXN3-245ENST00000556958 PMCHP20382 165 aa3.14□□□□□ -1.91
ATXN3-245ENST00000556958 SPAG11BQ08648 103 aa3.14□□□□□ -1.91
ATXN3-245ENST00000556958 COA6Q5JTJ3 125 aaKnown RBP3.14□□□□□ -1.91
ATXN3-245ENST00000556958 FAM231DQ6ZW35 169 aa3.14□□□□□ -1.91
ATXN3-245ENST00000556958 KRTAP7-1Q8IUC3 87 aa3.14□□□□□ -1.91
ATXN3-245ENST00000556958 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.13□□□□□ -1.91
ATXN3-245ENST00000556958 TRAV9-1A0A075B6T8 112 aa3.13□□□□□ -1.91
ATXN3-245ENST00000556958 IGKV2-29A2NJV5 120 aaPredicted RBP3.13□□□□□ -1.91
ATXN3-245ENST00000556958 SPINK1P00995 79 aa3.13□□□□□ -1.91
ATXN3-245ENST00000556958 UBE2AP49459 152 aa3.13□□□□□ -1.91
ATXN3-245ENST00000556958 GAGE2AQ6NT46 116 aa3.13□□□□□ -1.91
ATXN3-245ENST00000556958 MRPL54Q6P161 138 aaKnown RBP3.13□□□□□ -1.91
ATXN3-245ENST00000556958 Q75L30 129 aa3.13□□□□□ -1.91
ATXN3-245ENST00000556958 FAM19A2Q8N3H0 131 aa3.13□□□□□ -1.91
ATXN3-245ENST00000556958 GATD1Q8NB37 220 aa3.13□□□□□ -1.91
ATXN3-245ENST00000556958 OR10D4PQ8NGN7 298 aa3.13□□□□□ -1.91
ATXN3-245ENST00000556958 RPL39LQ96EH5 51 aaKnown RBP3.13□□□□□ -1.91
ATXN3-245ENST00000556958 NAT8BQ9UHF3 227 aa3.13□□□□□ -1.91
ATXN3-245ENST00000556958 V9GYV3 84 aa3.13□□□□□ -1.91
ATXN3-245ENST00000556958 TSTD3H0UI37 97 aa3.12□□□□□ -1.91
ATXN3-245ENST00000556958 SMKR1H3BMG3 65 aa3.12□□□□□ -1.91
ATXN3-245ENST00000556958 CKS2P33552 79 aa3.12□□□□□ -1.91
ATXN3-245ENST00000556958 CTRLP40313 264 aa3.12□□□□□ -1.91
ATXN3-245ENST00000556958 MRPL52Q86TS9 123 aaKnown RBP3.12□□□□□ -1.91
ATXN3-245ENST00000556958 AMN1Q8IY45 258 aa3.12□□□□□ -1.91
ATXN3-245ENST00000556958 ST20Q9HBF5 79 aa3.12□□□□□ -1.91
ATXN3-245ENST00000556958 C22orf24Q9Y442 160 aa3.12□□□□□ -1.91
ATXN3-245ENST00000556958 SMIM27A0A1W2PRY6 76 aa3.11□□□□□ -1.91
ATXN3-245ENST00000556958 LINC00587B1AMM8 73 aa3.11□□□□□ -1.91
ATXN3-245ENST00000556958 HIST1H2BKO60814 126 aa3.11□□□□□ -1.91
ATXN3-245ENST00000556958 APCSP02743 223 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms