RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 KIAA0087Q14695 138 aa15.75■□□□□ 0.11
SIX4-203ENST00000556952 CFAP161Q6P656 301 aa15.75■□□□□ 0.11
SIX4-203ENST00000556952 M0R2N4 97 aa15.74■□□□□ 0.11
SIX4-203ENST00000556952 A0A0J9YXY3 114 aa15.72■□□□□ 0.11
SIX4-203ENST00000556952 C15orf56Q8N910 161 aa15.72■□□□□ 0.11
SIX4-203ENST00000556952 CKS1BP61024 79 aa15.71■□□□□ 0.11
SIX4-203ENST00000556952 GVQW2A0A096LPI5 108 aaPredicted RBP15.69■□□□□ 0.1
SIX4-203ENST00000556952 Q6ZR54 194 aa15.69■□□□□ 0.1
SIX4-203ENST00000556952 ZNF561-AS1K7EIQ3 104 aa15.68■□□□□ 0.1
SIX4-203ENST00000556952 PSCAO43653 123 aa15.68■□□□□ 0.1
SIX4-203ENST00000556952 CTAG1AP78358 180 aa15.68■□□□□ 0.1
SIX4-203ENST00000556952 DNAH17Q9UFH2 4485 aa15.67■□□□□ 0.1
SIX4-203ENST00000556952 TIMM17BO60830 172 aa15.67■□□□□ 0.1
SIX4-203ENST00000556952 TMEM238C9JI98 176 aa15.66■□□□□ 0.1
SIX4-203ENST00000556952 NTN5Q8WTR8 489 aaPredicted RBP15.66■□□□□ 0.1
SIX4-203ENST00000556952 USP17L23D6RBM5 183 aa15.66■□□□□ 0.1
SIX4-203ENST00000556952 F8WDY8 70 aa15.66■□□□□ 0.1
SIX4-203ENST00000556952 HIGD2BQ4VC39 106 aa15.66■□□□□ 0.1
SIX4-203ENST00000556952 C2orf82Q6UX34 121 aa15.66■□□□□ 0.1
SIX4-203ENST00000556952 SPANXB1Q9NS25 103 aaPredicted RBP15.66■□□□□ 0.1
SIX4-203ENST00000556952 LINC00587B1AMM8 73 aa15.65■□□□□ 0.1
SIX4-203ENST00000556952 HSD52Q0P140 79 aa15.65■□□□□ 0.1
SIX4-203ENST00000556952 CIRBPQ14011 172 aaKnown RBP15.65■□□□□ 0.1
SIX4-203ENST00000556952 C2orf48Q96LS8 159 aa15.65■□□□□ 0.1
SIX4-203ENST00000556952 FAT2Q9NYQ8 4349 aa15.65■□□□□ 0.1
SIX4-203ENST00000556952 MEIG1Q5JSS6 88 aa15.64■□□□□ 0.09
SIX4-203ENST00000556952 TAL2Q16559 108 aa15.63■□□□□ 0.09
SIX4-203ENST00000556952 Q6ZRN7 208 aaPredicted RBP15.63■□□□□ 0.09
SIX4-203ENST00000556952 C6orf223Q8N319 242 aa15.63■□□□□ 0.09
SIX4-203ENST00000556952 LINC00526Q96FQ7 95 aa15.62■□□□□ 0.09
SIX4-203ENST00000556952 LITAFQ99732 161 aa15.62■□□□□ 0.09
SIX4-203ENST00000556952 EPPK1P58107 5090 aaKnown RBP15.62■□□□□ 0.09
SIX4-203ENST00000556952 HIST1H4GQ99525 98 aa15.62■□□□□ 0.09
SIX4-203ENST00000556952 CAMK2N2Q96S95 79 aa15.61■□□□□ 0.09
SIX4-203ENST00000556952 SRSF9Q13242 221 aaKnown RBP eCLIP15.6■□□□□ 0.09
SIX4-203ENST00000556952 Q6ZVH6 145 aa15.6■□□□□ 0.09
SIX4-203ENST00000556952 SPANXDQ9BXN6 97 aa15.6■□□□□ 0.09
SIX4-203ENST00000556952 SPANXCQ9NY87 97 aa15.6■□□□□ 0.09
SIX4-203ENST00000556952 ERG28Q9UKR5 140 aa15.6■□□□□ 0.09
SIX4-203ENST00000556952 UNQ6190/PRO20217Q6UXQ8 127 aa15.59■□□□□ 0.09
SIX4-203ENST00000556952 TRBV30A0A0K0K1B3 111 aa15.58■□□□□ 0.08
SIX4-203ENST00000556952 M0R143 59 aa15.58■□□□□ 0.08
SIX4-203ENST00000556952 SMIM13P0DJ93 91 aa15.58■□□□□ 0.08
SIX4-203ENST00000556952 COX17Q14061 63 aa15.58■□□□□ 0.08
SIX4-203ENST00000556952 C14orf177Q52M58 125 aa15.58■□□□□ 0.08
SIX4-203ENST00000556952 LECT2O14960 151 aa15.57■□□□□ 0.08
SIX4-203ENST00000556952 ADAMTSL4-AS1Q5T5F5 129 aa15.57■□□□□ 0.08
SIX4-203ENST00000556952 C10orf25Q5T742 122 aa15.57■□□□□ 0.08
SIX4-203ENST00000556952 RTL8CO15255 209 aa15.56■□□□□ 0.08
SIX4-203ENST00000556952 C1orf134Q5TEV5 83 aa15.56■□□□□ 0.08
SIX4-203ENST00000556952 CEND1Q8N111 149 aa15.56■□□□□ 0.08
SIX4-203ENST00000556952 HINT1P49773 126 aaPredicted RBP15.54■□□□□ 0.08
SIX4-203ENST00000556952 LINC00158P58513 81 aa15.54■□□□□ 0.08
SIX4-203ENST00000556952 SYCNQ0VAF6 134 aa15.54■□□□□ 0.08
SIX4-203ENST00000556952 WFDC2Q14508 124 aa15.54■□□□□ 0.08
SIX4-203ENST00000556952 C6orf48Q9UBA6 75 aa15.54■□□□□ 0.08
SIX4-203ENST00000556952 A0A0U1RRA0 63 aa15.53■□□□□ 0.08
SIX4-203ENST00000556952 GCSHP23434 173 aa15.53■□□□□ 0.08
SIX4-203ENST00000556952 PFN2P35080 140 aa15.53■□□□□ 0.08
SIX4-203ENST00000556952 BVES-AS1Q5T3Y7 98 aa15.53■□□□□ 0.08
SIX4-203ENST00000556952 Q6ZRU5 148 aa15.53■□□□□ 0.08
SIX4-203ENST00000556952 HECTD4Q9Y4D8 3996 aa15.53■□□□□ 0.08
SIX4-203ENST00000556952 LRCOL1A6NCL2 159 aa15.53■□□□□ 0.08
SIX4-203ENST00000556952 IFITM1P13164 125 aa15.52■□□□□ 0.07
SIX4-203ENST00000556952 COPS9Q8WXC6 57 aa15.52■□□□□ 0.07
SIX4-203ENST00000556952 MIR7-3HGQ8N6C7 128 aa15.51■□□□□ 0.07
SIX4-203ENST00000556952 DAND5Q8N907 189 aa15.51■□□□□ 0.07
SIX4-203ENST00000556952 CARD19Q96LW7 228 aa15.51■□□□□ 0.07
SIX4-203ENST00000556952 PTTG1IPP53801 180 aa15.5■□□□□ 0.07
SIX4-203ENST00000556952 C9orf116Q5BN46 136 aaPredicted RBP15.5■□□□□ 0.07
SIX4-203ENST00000556952 PKD1P98161 4303 aa15.5■□□□□ 0.07
SIX4-203ENST00000556952 RNF151Q2KHN1 245 aa15.49■□□□□ 0.07
SIX4-203ENST00000556952 SNHG12Q9BXW3 62 aa15.49■□□□□ 0.07
SIX4-203ENST00000556952 PPDPFQ9H3Y8 114 aa15.49■□□□□ 0.07
SIX4-203ENST00000556952 MUSTN1Q8IVN3 82 aa15.49■□□□□ 0.07
SIX4-203ENST00000556952 RPL24P83731 157 aaKnown RBP15.48■□□□□ 0.07
SIX4-203ENST00000556952 BATFQ16520 125 aa15.48■□□□□ 0.07
SIX4-203ENST00000556952 LINC00308Q8TCZ7 52 aa15.48■□□□□ 0.07
SIX4-203ENST00000556952 DNAH11Q96DT5 4516 aa15.47■□□□□ 0.07
SIX4-203ENST00000556952 TMEM238LA0A1B0GVL6 79 aa15.47■□□□□ 0.07
SIX4-203ENST00000556952 A6NJY4 79 aa15.47■□□□□ 0.07
SIX4-203ENST00000556952 SLPIP03973 132 aa15.47■□□□□ 0.07
SIX4-203ENST00000556952 FXYD2P54710 66 aa15.47■□□□□ 0.07
SIX4-203ENST00000556952 CNBPP62633 177 aaKnown RBP15.47■□□□□ 0.07
SIX4-203ENST00000556952 EREGO14944 169 aa15.45■□□□□ 0.06
SIX4-203ENST00000556952 NPC2P61916 151 aa15.45■□□□□ 0.06
SIX4-203ENST00000556952 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.45■□□□□ 0.06
SIX4-203ENST00000556952 LINC00336Q6ZUF6 198 aa15.45■□□□□ 0.06
SIX4-203ENST00000556952 A0A087WTM6 91 aa15.44■□□□□ 0.06
SIX4-203ENST00000556952 NDUFC2-KCTD14E9PQ53 114 aa15.43■□□□□ 0.06
SIX4-203ENST00000556952 Q8N814 137 aa15.43■□□□□ 0.06
SIX4-203ENST00000556952 A6NDN8 102 aa15.42■□□□□ 0.06
SIX4-203ENST00000556952 TLX1NBP0CAT3 122 aa15.42■□□□□ 0.06
SIX4-203ENST00000556952 SOSTDC1Q6X4U4 206 aa15.42■□□□□ 0.06
SIX4-203ENST00000556952 LOC107984156A0A0G2JMH3 177 aa15.41■□□□□ 0.06
SIX4-203ENST00000556952 A4D1N5 150 aa15.41■□□□□ 0.06
SIX4-203ENST00000556952 TNP2Q05952 138 aa15.41■□□□□ 0.06
SIX4-203ENST00000556952 ARL17AQ8IVW1 177 aa15.41■□□□□ 0.06
SIX4-203ENST00000556952 SND1-IT1Q9HBX3 110 aa15.41■□□□□ 0.06
SIX4-203ENST00000556952 PKHD1P08F94 4074 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms