RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 CHTF8P0CG12 524 aa6.14□□□□□ -1.43
SRP54-210ENST00000556380 HERVK_113P63121 156 aa6.14□□□□□ -1.43
SRP54-210ENST00000556380 SPAG11BQ08648 103 aa6.14□□□□□ -1.43
SRP54-210ENST00000556380 PMCHL1Q16048 86 aa6.14□□□□□ -1.43
SRP54-210ENST00000556380 Q6ZRU5 148 aa6.14□□□□□ -1.43
SRP54-210ENST00000556380 CARD19Q96LW7 228 aa6.14□□□□□ -1.43
SRP54-210ENST00000556380 IGLV5-45A0A087WSX0 123 aa6.13□□□□□ -1.43
SRP54-210ENST00000556380 EPM2AB3EWF7 344 aa6.13□□□□□ -1.43
SRP54-210ENST00000556380 ATP5LO75964 103 aa6.13□□□□□ -1.43
SRP54-210ENST00000556380 PMVKQ15126 192 aa6.13□□□□□ -1.43
SRP54-210ENST00000556380 SPACA4Q8TDM5 124 aa6.13□□□□□ -1.43
SRP54-210ENST00000556380 ORAOV1Q8WV07 137 aa6.13□□□□□ -1.43
SRP54-210ENST00000556380 CDKN2A-AS1Q9UH64 79 aa6.13□□□□□ -1.43
SRP54-210ENST00000556380 PKHD1L1Q86WI1 4243 aa6.13□□□□□ -1.43
SRP54-210ENST00000556380 TINCRA0A1B0GVN0 87 aa6.12□□□□□ -1.43
SRP54-210ENST00000556380 RNF151Q2KHN1 245 aa6.12□□□□□ -1.43
SRP54-210ENST00000556380 C10orf25Q5T742 122 aa6.12□□□□□ -1.43
SRP54-210ENST00000556380 Q5VSD8 79 aa6.12□□□□□ -1.43
SRP54-210ENST00000556380 KRTAP5-3Q6L8H2 238 aa6.12□□□□□ -1.43
SRP54-210ENST00000556380 BAGE3Q86Y29 109 aa6.12□□□□□ -1.43
SRP54-210ENST00000556380 CAMK2N2Q96S95 79 aa6.12□□□□□ -1.43
SRP54-210ENST00000556380 FLG2Q5D862 2391 aaPredicted RBP6.11□□□□□ -1.43
SRP54-210ENST00000556380 MYCBP2O75592 4640 aa6.11□□□□□ -1.43
SRP54-210ENST00000556380 A0A096LNI7 61 aa6.11□□□□□ -1.43
SRP54-210ENST00000556380 HSBP1O75506 76 aa6.11□□□□□ -1.43
SRP54-210ENST00000556380 KRTAP10-4P60372 401 aaPredicted RBP6.11□□□□□ -1.43
SRP54-210ENST00000556380 UNQ6190/PRO20217Q6UXQ8 127 aa6.11□□□□□ -1.43
SRP54-210ENST00000556380 GEMIN7Q9H840 131 aaKnown RBP6.11□□□□□ -1.43
SRP54-210ENST00000556380 MRPL35Q9NZE8 188 aaKnown RBP6.11□□□□□ -1.43
SRP54-210ENST00000556380 PLAC8Q9NZF1 115 aa6.11□□□□□ -1.43
SRP54-210ENST00000556380 A0A087WYN8 130 aa6.1□□□□□ -1.43
SRP54-210ENST00000556380 IGLC3P0DOY3 106 aa6.1□□□□□ -1.43
SRP54-210ENST00000556380 C6orf48Q9UBA6 75 aa6.1□□□□□ -1.43
SRP54-210ENST00000556380 IGKV2-24A0A0C4DH68 120 aa6.09□□□□□ -1.43
SRP54-210ENST00000556380 LOC107984640A0A0U1RRK4 108 aa6.09□□□□□ -1.43
SRP54-210ENST00000556380 SMIM1B2RUZ4 78 aa6.09□□□□□ -1.43
SRP54-210ENST00000556380 NDUFA1O15239 70 aa6.09□□□□□ -1.43
SRP54-210ENST00000556380 NUPR1O60356 82 aa6.09□□□□□ -1.43
SRP54-210ENST00000556380 TLX1NBP0CAT3 122 aa6.09□□□□□ -1.43
SRP54-210ENST00000556380 PTTG1IPP53801 180 aa6.09□□□□□ -1.43
SRP54-210ENST00000556380 FAM19A2Q8N3H0 131 aa6.09□□□□□ -1.43
SRP54-210ENST00000556380 LINC00469Q8N7U9 141 aa6.09□□□□□ -1.43
SRP54-210ENST00000556380 LINC00474Q9P2X8 69 aa6.09□□□□□ -1.43
SRP54-210ENST00000556380 TRAV12-1A0A0B4J245 112 aa6.08□□□□□ -1.44
SRP54-210ENST00000556380 H3BRM9 83 aa6.08□□□□□ -1.44
SRP54-210ENST00000556380 SERF1AO75920 110 aa6.08□□□□□ -1.44
SRP54-210ENST00000556380 MAJINQ3KP22 176 aa6.08□□□□□ -1.44
SRP54-210ENST00000556380 C2orf82Q6UX34 121 aa6.08□□□□□ -1.44
SRP54-210ENST00000556380 Q8IZM0 81 aa6.08□□□□□ -1.44
SRP54-210ENST00000556380 PACRGQ96M98 296 aaPredicted RBP6.08□□□□□ -1.44
SRP54-210ENST00000556380 IGLV5-39A0A0G2JS06 123 aa6.07□□□□□ -1.44
SRP54-210ENST00000556380 ATP6V1G1O75348 118 aa6.07□□□□□ -1.44
SRP54-210ENST00000556380 ZNF22P17026 224 aaPredicted RBP6.07□□□□□ -1.44
SRP54-210ENST00000556380 NDUFA6P56556 154 aa6.07□□□□□ -1.44
SRP54-210ENST00000556380 IFI27L1Q96BM0 104 aa6.07□□□□□ -1.44
SRP54-210ENST00000556380 DPH3Q96FX2 82 aa6.07□□□□□ -1.44
SRP54-210ENST00000556380 CDIP1Q9H305 208 aa6.07□□□□□ -1.44
SRP54-210ENST00000556380 TRBV30A0A0K0K1B3 111 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 A0A1W2PNN7 141 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 C11orf86A6NJI1 115 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 HIST1H2BKO60814 126 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 LEPROTL1O95214 131 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 HIST1H2BJP06899 126 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 PRSS2P07478 247 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 SPINK8P0C7L1 97 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 HIST1H2BOP23527 126 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 HIST1H2BBP33778 126 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 CXCL5P42830 114 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 HIST1H2BDP58876 126 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 HIST1H2BCP62807 126 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 GAGE2BQ13066 116 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 HIST2H2BEQ16778 126 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 C6orf226Q5I0X4 101 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.06□□□□□ -1.44
SRP54-210ENST00000556380 Q6ZRP5 223 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 STPG4Q8N801 248 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 HIST1H2BHQ93079 126 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 HIST1H2BNQ99877 126 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 HIST1H2BMQ99879 126 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 TOMM7Q9P0U1 55 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 HSPB8Q9UJY1 196 aa6.06□□□□□ -1.44
SRP54-210ENST00000556380 INAFM2P0DMQ5 153 aa6.05□□□□□ -1.44
SRP54-210ENST00000556380 C9orf116Q5BN46 136 aaPredicted RBP6.05□□□□□ -1.44
SRP54-210ENST00000556380 FAT3Q8TDW7 4589 aa6.04□□□□□ -1.44
SRP54-210ENST00000556380 DMBT1Q9UGM3 2413 aaPredicted RBP6.04□□□□□ -1.44
SRP54-210ENST00000556380 LRP1Q07954 4544 aaKnown RBP6.04□□□□□ -1.44
SRP54-210ENST00000556380 F8VRH5 84 aa6.04□□□□□ -1.44
SRP54-210ENST00000556380 CKS1BP61024 79 aa6.04□□□□□ -1.44
SRP54-210ENST00000556380 COA6Q5JTJ3 125 aaKnown RBP6.04□□□□□ -1.44
SRP54-210ENST00000556380 SFTA2Q6UW10 78 aa6.04□□□□□ -1.44
SRP54-210ENST00000556380 COX7B2Q8TF08 81 aa6.04□□□□□ -1.44
SRP54-210ENST00000556380 CHTOPQ9Y3Y2 248 aaKnown RBP6.04□□□□□ -1.44
SRP54-210ENST00000556380 NDUFC2-KCTD14E9PQ53 114 aa6.03□□□□□ -1.44
SRP54-210ENST00000556380 RPL18AQ02543 176 aaKnown RBP6.03□□□□□ -1.44
SRP54-210ENST00000556380 KRTAP7-1Q8IUC3 87 aa6.03□□□□□ -1.44
SRP54-210ENST00000556380 RPL37AP61513 92 aaKnown RBP6.02□□□□□ -1.45
SRP54-210ENST00000556380 ODF1Q14990 250 aa6.02□□□□□ -1.45
SRP54-210ENST00000556380 TMEM223A0PJW6 202 aa6.01□□□□□ -1.45
SRP54-210ENST00000556380 FABP4P15090 132 aa6.01□□□□□ -1.45
SRP54-210ENST00000556380 PLNP26678 52 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms