RNA–Protein interactions for RNA: ENST00000556360.1

PCNX4-212, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-212ENST00000556360 ZNF22P17026 224 aaPredicted RBP2.03□□□□□ -2.08
PCNX4-212ENST00000556360 TCTAP57738 103 aa2.03□□□□□ -2.08
PCNX4-212ENST00000556360 BLCAPP62952 87 aa2.03□□□□□ -2.08
PCNX4-212ENST00000556360 MRPS36P82909 103 aaKnown RBP2.03□□□□□ -2.08
PCNX4-212ENST00000556360 WFDC2Q14508 124 aa2.03□□□□□ -2.08
PCNX4-212ENST00000556360 ETDBQ3ZM63 59 aa2.03□□□□□ -2.08
PCNX4-212ENST00000556360 SCGB1D4Q6XE38 83 aa2.03□□□□□ -2.08
PCNX4-212ENST00000556360 FAM19A3Q7Z5A8 133 aa2.03□□□□□ -2.08
PCNX4-212ENST00000556360 TEN1Q86WV5 123 aa2.03□□□□□ -2.08
PCNX4-212ENST00000556360 PPDPFLQ8WWR9 84 aa2.03□□□□□ -2.08
PCNX4-212ENST00000556360 UBE2E2Q96LR5 201 aa2.03□□□□□ -2.08
PCNX4-212ENST00000556360 CCL19Q99731 98 aa2.03□□□□□ -2.08
PCNX4-212ENST00000556360 TIMM21Q9BVV7 248 aa2.03□□□□□ -2.08
PCNX4-212ENST00000556360 SPANXA1Q9NS26 97 aa2.03□□□□□ -2.08
PCNX4-212ENST00000556360 MRPL16Q9NX20 251 aaKnown RBP2.03□□□□□ -2.08
PCNX4-212ENST00000556360 LINC00527Q9UJ94 153 aa2.03□□□□□ -2.08
PCNX4-212ENST00000556360 VPREB3Q9UKI3 123 aa2.03□□□□□ -2.08
PCNX4-212ENST00000556360 APCP25054 2843 aa2.03□□□□□ -2.09
PCNX4-212ENST00000556360 CHD6Q8TD26 2715 aa2.03□□□□□ -2.09
PCNX4-212ENST00000556360 SETXQ7Z333 2677 aaKnown RBP2.03□□□□□ -2.09
PCNX4-212ENST00000556360 NAV2Q8IVL1 2488 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 VPS13CQ709C8 3753 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 ITPR3Q14573 2671 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 EPG5Q9HCE0 2579 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.02□□□□□ -2.09
PCNX4-212ENST00000556360 TRAV12-3A0A0B4J271 114 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 TRBV30A0A0K0K1B3 111 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 TINCRA0A1B0GVN0 87 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 A8MWV9 139 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 M0R2P5 195 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 APOMO95445 188 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 IGHV3-11P01762 117 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 IGHV3-33P01772 117 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 ZNF688P0C7X2 276 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 LGALS3P17931 250 aaKnown RBP2.02□□□□□ -2.09
PCNX4-212ENST00000556360 ATP5J2P56134 94 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 DEFB1P60022 68 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 RPL39P62891 51 aaKnown RBP2.02□□□□□ -2.09
PCNX4-212ENST00000556360 LINC00304Q8N9R0 145 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 TMEM263Q8WUH6 116 aaKnown RBP2.02□□□□□ -2.09
PCNX4-212ENST00000556360 DNAJC30Q96LL9 226 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 SIGMAR1Q99720 223 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 SPANXDQ9BXN6 97 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 SPANXCQ9NY87 97 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 PRO1854Q9UHT4 67 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 NF1P21359 2839 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 POLQO75417 2590 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 ABCA12Q86UK0 2595 aa2.02□□□□□ -2.09
PCNX4-212ENST00000556360 SVEP1Q4LDE5 3571 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 SORL1Q92673 2214 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 IGHV1-58A0A0C4DH39 117 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 A0A1B0GV72 72 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 FAM240AA0A1B0GVK7 77 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 H3BMM0 161 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 H3BT86 120 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 TCL1BO95988 128 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 IGHV3-53P01767 116 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 IGHV3-30-3P0DP02 117 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 IFITM1P13164 125 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 INSL3P51460 131 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 RBMY1FQ15415 496 aaKnown RBP2.01□□□□□ -2.09
PCNX4-212ENST00000556360 ZNF56Q15929 161 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 MIAQ16674 131 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 DEFB112Q30KQ8 113 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 TMEM170BQ5T4T1 132 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 ZFAND6Q6FIF0 208 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 Q6ZUT4 128 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 TMEM86BQ8N661 226 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 MIR7-3HGQ8N6C7 128 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 SPANXA2-OT1Q8N9U9 137 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 ST20-AS1Q8NBB2 130 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 C11orf72Q8NBR9 251 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 C4orf3Q8WVX3 66 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 CHCHD7Q9BUK0 85 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 UBE2D4Q9Y2X8 147 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 ZFYVE26Q68DK2 2539 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 ZNF462Q96JM2 2506 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 TLN2Q9Y4G6 2542 aa2.01□□□□□ -2.09
PCNX4-212ENST00000556360 NIPBLQ6KC79 2804 aaeCLIP2.01□□□□□ -2.09
PCNX4-212ENST00000556360 FAM208BQ5VWN6 2430 aa2□□□□□ -2.09
PCNX4-212ENST00000556360 FLNAP21333 2647 aaKnown RBP2□□□□□ -2.09
PCNX4-212ENST00000556360 AKAP9Q99996 3911 aa2□□□□□ -2.09
PCNX4-212ENST00000556360 TRAV12-2A0A075B6T6 113 aa2□□□□□ -2.09
PCNX4-212ENST00000556360 TRAV25A0A0B4J276 109 aa2□□□□□ -2.09
PCNX4-212ENST00000556360 A0A0J9YXV3 536 aa2□□□□□ -2.09
PCNX4-212ENST00000556360 TRBV10-1A0A0K0K1A3 114 aa2□□□□□ -2.09
PCNX4-212ENST00000556360 TMEM262E9PQX1 116 aa2□□□□□ -2.09
PCNX4-212ENST00000556360 NDUFA1O15239 70 aa2□□□□□ -2.09
PCNX4-212ENST00000556360 SLC25A20O43772 301 aa2□□□□□ -2.09
PCNX4-212ENST00000556360 IGKV4-1P06312 121 aa2□□□□□ -2.09
PCNX4-212ENST00000556360 CD28P10747 220 aa2□□□□□ -2.09
PCNX4-212ENST00000556360 SMAGPQ0VAQ4 97 aa2□□□□□ -2.09
PCNX4-212ENST00000556360 ATXN8Q156A1 80 aa2□□□□□ -2.09
PCNX4-212ENST00000556360 MRPL23Q16540 153 aaKnown RBP2□□□□□ -2.09
PCNX4-212ENST00000556360 SPINK13Q1W4C9 94 aa2□□□□□ -2.09
PCNX4-212ENST00000556360 RNASE13Q5GAN3 156 aaKnown RBP2□□□□□ -2.09
PCNX4-212ENST00000556360 DEFB121Q5J5C9 76 aa2□□□□□ -2.09
PCNX4-212ENST00000556360 FAM74A4Q5TZK3 123 aa2□□□□□ -2.09
PCNX4-212ENST00000556360 Q6Q795 121 aa2□□□□□ -2.09
PCNX4-212ENST00000556360 ANKRD29Q8N6D5 301 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms