RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 NUPR1O60356 82 aa6.3□□□□□ -1.4
SYNE2-221ENST00000556342 TNFRSF6BO95407 300 aa6.3□□□□□ -1.4
SYNE2-221ENST00000556342 ALKAL2Q6UX46 152 aa6.3□□□□□ -1.4
SYNE2-221ENST00000556342 NAT8BQ9UHF3 227 aa6.3□□□□□ -1.4
SYNE2-221ENST00000556342 IFI27P40305 119 aaPredicted RBP6.29□□□□□ -1.4
SYNE2-221ENST00000556342 LINC00242Q5T6M2 205 aa6.29□□□□□ -1.4
SYNE2-221ENST00000556342 EIF5A2Q9GZV4 153 aaKnown RBP6.29□□□□□ -1.4
SYNE2-221ENST00000556342 C22orf24Q9Y442 160 aa6.29□□□□□ -1.4
SYNE2-221ENST00000556342 D6R8Y8 96 aa6.28□□□□□ -1.4
SYNE2-221ENST00000556342 NPYP01303 97 aa6.28□□□□□ -1.4
SYNE2-221ENST00000556342 RAB14P61106 215 aa6.28□□□□□ -1.4
SYNE2-221ENST00000556342 FAM74A3Q4VXF1 159 aa6.28□□□□□ -1.4
SYNE2-221ENST00000556342 TYMSOSQ8TAI1 123 aa6.28□□□□□ -1.4
SYNE2-221ENST00000556342 CTDSP1Q9GZU7 261 aa6.28□□□□□ -1.4
SYNE2-221ENST00000556342 IGLV4-3A0A075B6K6 122 aa6.27□□□□□ -1.41
SYNE2-221ENST00000556342 A0A1B0GW15 77 aa6.27□□□□□ -1.41
SYNE2-221ENST00000556342 SMIM27A0A1W2PRY6 76 aa6.27□□□□□ -1.41
SYNE2-221ENST00000556342 SRP19P09132 144 aaKnown RBP6.27□□□□□ -1.41
SYNE2-221ENST00000556342 CRYGAP11844 174 aa6.27□□□□□ -1.41
SYNE2-221ENST00000556342 LBHQ53QV2 105 aaPredicted RBP6.27□□□□□ -1.41
SYNE2-221ENST00000556342 LINC01561Q8N1V8 128 aa6.27□□□□□ -1.41
SYNE2-221ENST00000556342 PYGO1Q9Y3Y4 419 aa6.27□□□□□ -1.41
SYNE2-221ENST00000556342 RPL28P46779 137 aaKnown RBP6.26□□□□□ -1.41
SYNE2-221ENST00000556342 LINC00469Q8N7U9 141 aa6.26□□□□□ -1.41
SYNE2-221ENST00000556342 TMEM141Q96I45 108 aa6.26□□□□□ -1.41
SYNE2-221ENST00000556342 XAGE1AQ9HD64 81 aa6.26□□□□□ -1.41
SYNE2-221ENST00000556342 F8W036 122 aa6.25□□□□□ -1.41
SYNE2-221ENST00000556342 TRIAP1O43715 76 aa6.25□□□□□ -1.41
SYNE2-221ENST00000556342 BCE1O60756 84 aa6.25□□□□□ -1.41
SYNE2-221ENST00000556342 PRSS2P07478 247 aa6.25□□□□□ -1.41
SYNE2-221ENST00000556342 RAB5AP20339 215 aa6.25□□□□□ -1.41
SYNE2-221ENST00000556342 RPL23P62829 140 aaKnown RBP6.25□□□□□ -1.41
SYNE2-221ENST00000556342 C10orf91Q5T1B1 145 aa6.25□□□□□ -1.41
SYNE2-221ENST00000556342 TEX43Q6ZNM6 134 aa6.25□□□□□ -1.41
SYNE2-221ENST00000556342 TOMM7Q9P0U1 55 aa6.25□□□□□ -1.41
SYNE2-221ENST00000556342 TP73-AS1Q9UF72 201 aa6.25□□□□□ -1.41
SYNE2-221ENST00000556342 MUC17Q685J3 4493 aa6.25□□□□□ -1.41
SYNE2-221ENST00000556342 PPBPP02775 128 aa6.24□□□□□ -1.41
SYNE2-221ENST00000556342 S100A8P05109 93 aa6.24□□□□□ -1.41
SYNE2-221ENST00000556342 CKS1BP61024 79 aa6.24□□□□□ -1.41
SYNE2-221ENST00000556342 MRPL54Q6P161 138 aaKnown RBP6.24□□□□□ -1.41
SYNE2-221ENST00000556342 Q6ZN92 141 aa6.24□□□□□ -1.41
SYNE2-221ENST00000556342 MRPL55Q7Z7F7 128 aaKnown RBP6.24□□□□□ -1.41
SYNE2-221ENST00000556342 RETNLBQ9BQ08 111 aa6.24□□□□□ -1.41
SYNE2-221ENST00000556342 ANAPC11Q9NYG5 84 aa6.24□□□□□ -1.41
SYNE2-221ENST00000556342 A0A1B0GXF2 115 aa6.23□□□□□ -1.41
SYNE2-221ENST00000556342 ADIRFQ15847 76 aa6.23□□□□□ -1.41
SYNE2-221ENST00000556342 TPRXLQ17RH7 258 aa6.23□□□□□ -1.41
SYNE2-221ENST00000556342 C6orf226Q5I0X4 101 aa6.23□□□□□ -1.41
SYNE2-221ENST00000556342 UQCC3Q6UW78 93 aa6.23□□□□□ -1.41
SYNE2-221ENST00000556342 Q8IZM0 81 aa6.23□□□□□ -1.41
SYNE2-221ENST00000556342 C2orf88Q9BSF0 95 aa6.23□□□□□ -1.41
SYNE2-221ENST00000556342 SCO1O75880 301 aa6.22□□□□□ -1.41
SYNE2-221ENST00000556342 KRTAP13-2Q52LG2 175 aa6.22□□□□□ -1.41
SYNE2-221ENST00000556342 ZC2HC1BQ5TFG8 222 aa6.22□□□□□ -1.41
SYNE2-221ENST00000556342 LINC00173Q6ZV60 143 aa6.22□□□□□ -1.41
SYNE2-221ENST00000556342 ORMDL3Q8N138 153 aa6.22□□□□□ -1.41
SYNE2-221ENST00000556342 ALKBH7Q9BT30 221 aaPredicted RBP6.22□□□□□ -1.41
SYNE2-221ENST00000556342 TMEM136Q6ZRR5 245 aa6.21□□□□□ -1.42
SYNE2-221ENST00000556342 LINC00304Q8N9R0 145 aa6.21□□□□□ -1.42
SYNE2-221ENST00000556342 PRELID3AQ96N28 172 aa6.21□□□□□ -1.42
SYNE2-221ENST00000556342 NAT8Q9UHE5 227 aa6.21□□□□□ -1.42
SYNE2-221ENST00000556342 IGLV7-46A0A075B6I9 117 aa6.2□□□□□ -1.42
SYNE2-221ENST00000556342 LOC105371267A0A1B0GV96 52 aa6.2□□□□□ -1.42
SYNE2-221ENST00000556342 TMEM218A2RU14 115 aa6.2□□□□□ -1.42
SYNE2-221ENST00000556342 RPL37AP8A6NKH3 93 aa6.2□□□□□ -1.42
SYNE2-221ENST00000556342 F8VRH5 84 aa6.2□□□□□ -1.42
SYNE2-221ENST00000556342 ADCYAP1P18509 176 aa6.2□□□□□ -1.42
SYNE2-221ENST00000556342 KRTAP13-1Q8IUC0 172 aa6.2□□□□□ -1.42
SYNE2-221ENST00000556342 LINC00167Q96N53 147 aa6.2□□□□□ -1.42
SYNE2-221ENST00000556342 AMELXQ99217 191 aa6.2□□□□□ -1.42
SYNE2-221ENST00000556342 VCX2Q9H322 139 aa6.2□□□□□ -1.42
SYNE2-221ENST00000556342 CYSLTR1Q9Y271 337 aa6.2□□□□□ -1.42
SYNE2-221ENST00000556342 PRSS47A8MTI9 375 aa6.19□□□□□ -1.42
SYNE2-221ENST00000556342 C9JQL5 133 aa6.19□□□□□ -1.42
SYNE2-221ENST00000556342 FAM229BQ4G0N7 80 aa6.19□□□□□ -1.42
SYNE2-221ENST00000556342 C2orf66Q6UXQ4 117 aa6.19□□□□□ -1.42
SYNE2-221ENST00000556342 FAM19A3Q7Z5A8 133 aa6.19□□□□□ -1.42
SYNE2-221ENST00000556342 LOC389332A0A1B0GUA5 103 aa6.18□□□□□ -1.42
SYNE2-221ENST00000556342 GAGE10A6NGK3 116 aa6.18□□□□□ -1.42
SYNE2-221ENST00000556342 NPSP0C0P6 89 aa6.18□□□□□ -1.42
SYNE2-221ENST00000556342 CXCL5P42830 114 aa6.18□□□□□ -1.42
SYNE2-221ENST00000556342 UBE2AP49459 152 aa6.18□□□□□ -1.42
SYNE2-221ENST00000556342 CDKN2A-AS1Q9UH64 79 aa6.18□□□□□ -1.42
SYNE2-221ENST00000556342 IGIPA6NJ69 53 aa6.17□□□□□ -1.42
SYNE2-221ENST00000556342 HERVK_113P63121 156 aa6.17□□□□□ -1.42
SYNE2-221ENST00000556342 SEC11AP67812 179 aa6.17□□□□□ -1.42
SYNE2-221ENST00000556342 ATP5L2Q7Z4Y8 100 aa6.17□□□□□ -1.42
SYNE2-221ENST00000556342 MAP1LC3AQ9H492 121 aa6.17□□□□□ -1.42
SYNE2-221ENST00000556342 LAMTOR2Q9Y2Q5 125 aa6.17□□□□□ -1.42
SYNE2-221ENST00000556342 IGLV5-37A0A075B6J1 123 aa6.16□□□□□ -1.42
SYNE2-221ENST00000556342 IGKV2D-26A0A0A0MRZ7 120 aa6.16□□□□□ -1.42
SYNE2-221ENST00000556342 CTAG1AP78358 180 aa6.16□□□□□ -1.42
SYNE2-221ENST00000556342 Q8N8P6 123 aa6.16□□□□□ -1.42
SYNE2-221ENST00000556342 SEC11CQ9BY50 192 aa6.16□□□□□ -1.42
SYNE2-221ENST00000556342 GEMIN7Q9H840 131 aaKnown RBP6.16□□□□□ -1.42
SYNE2-221ENST00000556342 PNRC1Q12796 327 aaPredicted RBP6.15□□□□□ -1.42
SYNE2-221ENST00000556342 ORMDL2Q53FV1 153 aa6.15□□□□□ -1.42
SYNE2-221ENST00000556342 SMIM1B2RUZ4 78 aa6.14□□□□□ -1.43
SYNE2-221ENST00000556342 APOC3P02656 99 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms