RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 BAGE2Q86Y30 109 aa3.6□□□□□ -1.83
PRKCH-220ENST00000556164 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
PRKCH-220ENST00000556164 DHRS4-AS1Q9P1J3 65 aa3.6□□□□□ -1.83
PRKCH-220ENST00000556164 LINC00474Q9P2X8 69 aa3.6□□□□□ -1.83
PRKCH-220ENST00000556164 FXYD6-FXYD2A0A087WZ82 144 aa3.59□□□□□ -1.83
PRKCH-220ENST00000556164 GVQW2A0A096LPI5 108 aaPredicted RBP3.59□□□□□ -1.83
PRKCH-220ENST00000556164 A0A1B0GV50 99 aa3.59□□□□□ -1.83
PRKCH-220ENST00000556164 A0A1B0GX51 115 aa3.59□□□□□ -1.83
PRKCH-220ENST00000556164 CTRLP40313 264 aa3.59□□□□□ -1.83
PRKCH-220ENST00000556164 Q5BKY6 102 aa3.59□□□□□ -1.83
PRKCH-220ENST00000556164 RASL11AQ6T310 242 aa3.59□□□□□ -1.83
PRKCH-220ENST00000556164 C9orf62Q8N4C0 152 aa3.59□□□□□ -1.83
PRKCH-220ENST00000556164 PKIGQ9Y2B9 76 aa3.59□□□□□ -1.83
PRKCH-220ENST00000556164 LPAP08519 4548 aa3.58□□□□□ -1.84
PRKCH-220ENST00000556164 IGHV6-1A0A0B4J1U7 121 aa3.58□□□□□ -1.84
PRKCH-220ENST00000556164 SERF1AO75920 110 aa3.58□□□□□ -1.84
PRKCH-220ENST00000556164 ESDP10768 282 aa3.58□□□□□ -1.84
PRKCH-220ENST00000556164 BATFQ16520 125 aa3.58□□□□□ -1.84
PRKCH-220ENST00000556164 C6orf99Q4VX62 202 aa3.58□□□□□ -1.84
PRKCH-220ENST00000556164 AMMECR1LQ6DCA0 310 aa3.58□□□□□ -1.84
PRKCH-220ENST00000556164 FER1L6-AS1Q8NA97 138 aa3.58□□□□□ -1.84
PRKCH-220ENST00000556164 LINC00526Q96FQ7 95 aa3.58□□□□□ -1.84
PRKCH-220ENST00000556164 CARD19Q96LW7 228 aa3.58□□□□□ -1.84
PRKCH-220ENST00000556164 MED28Q9H204 178 aa3.58□□□□□ -1.84
PRKCH-220ENST00000556164 MED9Q9NWA0 146 aa3.58□□□□□ -1.84
PRKCH-220ENST00000556164 ERG28Q9UKR5 140 aa3.58□□□□□ -1.84
PRKCH-220ENST00000556164 C8orf87E5RJ46 101 aa3.57□□□□□ -1.84
PRKCH-220ENST00000556164 TRGC1P0CF51 173 aa3.57□□□□□ -1.84
PRKCH-220ENST00000556164 IGLC6P0CF74 106 aa3.57□□□□□ -1.84
PRKCH-220ENST00000556164 XCL1P47992 114 aa3.57□□□□□ -1.84
PRKCH-220ENST00000556164 SCGB1D4Q6XE38 83 aa3.57□□□□□ -1.84
PRKCH-220ENST00000556164 FAM104AQ969W3 186 aa3.57□□□□□ -1.84
PRKCH-220ENST00000556164 CST9LQ9H4G1 147 aa3.57□□□□□ -1.84
PRKCH-220ENST00000556164 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.56□□□□□ -1.84
PRKCH-220ENST00000556164 SMIM26A0A096LP01 95 aa3.56□□□□□ -1.84
PRKCH-220ENST00000556164 TRAV26-2A0A0B4J265 109 aa3.56□□□□□ -1.84
PRKCH-220ENST00000556164 IGHV1-58A0A0C4DH39 117 aa3.56□□□□□ -1.84
PRKCH-220ENST00000556164 IGKV2-29A2NJV5 120 aaPredicted RBP3.56□□□□□ -1.84
PRKCH-220ENST00000556164 TMEM218A2RU14 115 aa3.56□□□□□ -1.84
PRKCH-220ENST00000556164 APCSP02743 223 aa3.56□□□□□ -1.84
PRKCH-220ENST00000556164 MT-ND6P03923 174 aa3.56□□□□□ -1.84
PRKCH-220ENST00000556164 RHEBQ15382 184 aa3.56□□□□□ -1.84
PRKCH-220ENST00000556164 ZNF664Q8N3J9 261 aa3.56□□□□□ -1.84
PRKCH-220ENST00000556164 FAM213BQ8TBF2 198 aa3.56□□□□□ -1.84
PRKCH-220ENST00000556164 NAT8BQ9UHF3 227 aa3.56□□□□□ -1.84
PRKCH-220ENST00000556164 LOC107984640A0A0U1RRK4 108 aa3.55□□□□□ -1.84
PRKCH-220ENST00000556164 F2Z2F3 143 aa3.55□□□□□ -1.84
PRKCH-220ENST00000556164 J3KT08 172 aa3.55□□□□□ -1.84
PRKCH-220ENST00000556164 CCL25O15444 150 aa3.55□□□□□ -1.84
PRKCH-220ENST00000556164 FGF6P10767 208 aa3.55□□□□□ -1.84
PRKCH-220ENST00000556164 NTF3P20783 257 aa3.55□□□□□ -1.84
PRKCH-220ENST00000556164 SYCNQ0VAF6 134 aa3.55□□□□□ -1.84
PRKCH-220ENST00000556164 CENPWQ5EE01 88 aa3.55□□□□□ -1.84
PRKCH-220ENST00000556164 C1orf137Q5JT78 98 aa3.55□□□□□ -1.84
PRKCH-220ENST00000556164 COL5A1-AS1Q5SY13 56 aa3.55□□□□□ -1.84
PRKCH-220ENST00000556164 LYZL1Q6UWQ5 148 aa3.55□□□□□ -1.84
PRKCH-220ENST00000556164 KCNRGQ8N5I3 272 aa3.55□□□□□ -1.84
PRKCH-220ENST00000556164 LINC00337Q8N6G1 96 aa3.55□□□□□ -1.84
PRKCH-220ENST00000556164 MBD3L1Q8WWY6 194 aa3.55□□□□□ -1.84
PRKCH-220ENST00000556164 CYTL1Q9NRR1 136 aa3.55□□□□□ -1.84
PRKCH-220ENST00000556164 PSORS1C2Q9UIG4 136 aa3.55□□□□□ -1.84
PRKCH-220ENST00000556164 LOC389332A0A1B0GUA5 103 aa3.54□□□□□ -1.84
PRKCH-220ENST00000556164 LINC00959A0A1B0GUT2 108 aa3.54□□□□□ -1.84
PRKCH-220ENST00000556164 A0A1W2PNN7 141 aa3.54□□□□□ -1.84
PRKCH-220ENST00000556164 H7C423 109 aa3.54□□□□□ -1.84
PRKCH-220ENST00000556164 SCO1O75880 301 aa3.54□□□□□ -1.84
PRKCH-220ENST00000556164 NCR2O95944 276 aa3.54□□□□□ -1.84
PRKCH-220ENST00000556164 BCL2P10415 239 aa3.54□□□□□ -1.84
PRKCH-220ENST00000556164 TMEM241Q24JQ0 296 aa3.54□□□□□ -1.84
PRKCH-220ENST00000556164 ORMDL2Q53FV1 153 aa3.54□□□□□ -1.84
PRKCH-220ENST00000556164 RPL39LQ96EH5 51 aaKnown RBP3.54□□□□□ -1.84
PRKCH-220ENST00000556164 TMEM101Q96IK0 257 aa3.54□□□□□ -1.84
PRKCH-220ENST00000556164 LAMTOR2Q9Y2Q5 125 aa3.54□□□□□ -1.84
PRKCH-220ENST00000556164 IGLV4-69A0A075B6H9 119 aa3.53□□□□□ -1.84
PRKCH-220ENST00000556164 C19orf71A6NCJ1 209 aa3.53□□□□□ -1.84
PRKCH-220ENST00000556164 C1orf196B1AJZ1 125 aa3.53□□□□□ -1.84
PRKCH-220ENST00000556164 TMEM250H0YL14 139 aa3.53□□□□□ -1.84
PRKCH-220ENST00000556164 GNG4P50150 75 aa3.53□□□□□ -1.84
PRKCH-220ENST00000556164 RPL23P62829 140 aaKnown RBP3.53□□□□□ -1.84
PRKCH-220ENST00000556164 PMAIP1Q13794 54 aa3.53□□□□□ -1.84
PRKCH-220ENST00000556164 SS18Q15532 418 aa3.53□□□□□ -1.84
PRKCH-220ENST00000556164 KRTAP15-1Q3LI76 137 aa3.53□□□□□ -1.84
PRKCH-220ENST00000556164 C9orf116Q5BN46 136 aaPredicted RBP3.53□□□□□ -1.84
PRKCH-220ENST00000556164 CLLU1Q5K131 121 aa3.53□□□□□ -1.84
PRKCH-220ENST00000556164 PHF5AQ7RTV0 110 aaKnown RBP3.53□□□□□ -1.84
PRKCH-220ENST00000556164 DIRC1Q969H9 104 aa3.53□□□□□ -1.84
PRKCH-220ENST00000556164 PLEKHB2Q96CS7 222 aa3.53□□□□□ -1.84
PRKCH-220ENST00000556164 LITAFQ99732 161 aa3.53□□□□□ -1.84
PRKCH-220ENST00000556164 SNHG12Q9BXW3 62 aa3.53□□□□□ -1.84
PRKCH-220ENST00000556164 SDHAF1A6NFY7 115 aa3.52□□□□□ -1.85
PRKCH-220ENST00000556164 UMAD1C9J7I0 102 aa3.52□□□□□ -1.85
PRKCH-220ENST00000556164 G3V3Q6 166 aa3.52□□□□□ -1.85
PRKCH-220ENST00000556164 NDUFC2O95298 119 aa3.52□□□□□ -1.85
PRKCH-220ENST00000556164 APOMO95445 188 aa3.52□□□□□ -1.85
PRKCH-220ENST00000556164 IGLV7-43P04211 117 aa3.52□□□□□ -1.85
PRKCH-220ENST00000556164 EIF5AP63241 154 aaKnown RBP3.52□□□□□ -1.85
PRKCH-220ENST00000556164 LCE4AQ5TA78 99 aa3.52□□□□□ -1.85
PRKCH-220ENST00000556164 EIF5AL1Q6IS14 154 aaKnown RBP3.52□□□□□ -1.85
PRKCH-220ENST00000556164 Q8N377 158 aa3.52□□□□□ -1.85
PRKCH-220ENST00000556164 CAMK2N2Q96S95 79 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms