RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 URB1-AS1Q96HZ7 61 aa3.94□□□□□ -1.78
TMEM260-209ENST00000556079 AMELXQ99217 191 aa3.94□□□□□ -1.78
TMEM260-209ENST00000556079 ALKBH7Q9BT30 221 aaPredicted RBP3.94□□□□□ -1.78
TMEM260-209ENST00000556079 SEC11CQ9BY50 192 aa3.94□□□□□ -1.78
TMEM260-209ENST00000556079 RPS10P5Q9NQ39 176 aa3.94□□□□□ -1.78
TMEM260-209ENST00000556079 GAGE2DQ9UEU5 116 aa3.94□□□□□ -1.78
TMEM260-209ENST00000556079 CYSLTR1Q9Y271 337 aa3.94□□□□□ -1.78
TMEM260-209ENST00000556079 MUC2Q02817 5179 aa3.93□□□□□ -1.78
TMEM260-209ENST00000556079 A0A087WZ39 114 aa3.93□□□□□ -1.78
TMEM260-209ENST00000556079 PMCHL1Q16048 86 aa3.93□□□□□ -1.78
TMEM260-209ENST00000556079 TEX43Q6ZNM6 134 aa3.93□□□□□ -1.78
TMEM260-209ENST00000556079 LINC00469Q8N7U9 141 aa3.93□□□□□ -1.78
TMEM260-209ENST00000556079 OR10D4PQ8NGN7 298 aa3.93□□□□□ -1.78
TMEM260-209ENST00000556079 C7orf33Q8WU49 177 aa3.93□□□□□ -1.78
TMEM260-209ENST00000556079 C2orf48Q96LS8 159 aa3.93□□□□□ -1.78
TMEM260-209ENST00000556079 TOMM7Q9P0U1 55 aa3.93□□□□□ -1.78
TMEM260-209ENST00000556079 LAMTOR2Q9Y2Q5 125 aa3.93□□□□□ -1.78
TMEM260-209ENST00000556079 CARHSP1Q9Y2V2 147 aaKnown RBP3.93□□□□□ -1.78
TMEM260-209ENST00000556079 PYGO1Q9Y3Y4 419 aa3.93□□□□□ -1.78
TMEM260-209ENST00000556079 A0A096LNJ9 63 aa3.92□□□□□ -1.78
TMEM260-209ENST00000556079 NDUFA1O15239 70 aa3.92□□□□□ -1.78
TMEM260-209ENST00000556079 SMAGPQ0VAQ4 97 aa3.92□□□□□ -1.78
TMEM260-209ENST00000556079 FABP9Q0Z7S8 132 aa3.92□□□□□ -1.78
TMEM260-209ENST00000556079 C9orf129Q5T035 196 aaKnown RBP3.92□□□□□ -1.78
TMEM260-209ENST00000556079 TOMM6Q96B49 74 aa3.92□□□□□ -1.78
TMEM260-209ENST00000556079 CDKN2A-AS1Q9UH64 79 aa3.92□□□□□ -1.78
TMEM260-209ENST00000556079 PSORS1C2Q9UIG4 136 aa3.92□□□□□ -1.78
TMEM260-209ENST00000556079 APOC3P02656 99 aa3.91□□□□□ -1.78
TMEM260-209ENST00000556079 SPINK8P0C7L1 97 aa3.91□□□□□ -1.78
TMEM260-209ENST00000556079 PCP4P48539 62 aa3.91□□□□□ -1.78
TMEM260-209ENST00000556079 ORMDL2Q53FV1 153 aa3.91□□□□□ -1.78
TMEM260-209ENST00000556079 SCGB3A1Q96QR1 104 aa3.91□□□□□ -1.78
TMEM260-209ENST00000556079 GNB1LQ9BYB4 327 aa3.91□□□□□ -1.78
TMEM260-209ENST00000556079 VCX2Q9H322 139 aa3.91□□□□□ -1.78
TMEM260-209ENST00000556079 NXT2Q9NPJ8 142 aaKnown RBP3.91□□□□□ -1.78
TMEM260-209ENST00000556079 MRPL35Q9NZE8 188 aaKnown RBP3.91□□□□□ -1.78
TMEM260-209ENST00000556079 TRAV9-1A0A075B6T8 112 aa3.9□□□□□ -1.79
TMEM260-209ENST00000556079 LINC01546A6NGU7 62 aa3.9□□□□□ -1.79
TMEM260-209ENST00000556079 SMIM1B2RUZ4 78 aa3.9□□□□□ -1.79
TMEM260-209ENST00000556079 S100PP25815 95 aa3.9□□□□□ -1.79
TMEM260-209ENST00000556079 SRSF9Q13242 221 aaKnown RBP eCLIP3.9□□□□□ -1.79
TMEM260-209ENST00000556079 RNF151Q2KHN1 245 aa3.9□□□□□ -1.79
TMEM260-209ENST00000556079 Q6ZN92 141 aa3.9□□□□□ -1.79
TMEM260-209ENST00000556079 CBLN2Q8IUK8 224 aa3.9□□□□□ -1.79
TMEM260-209ENST00000556079 YPEL4Q96NS1 127 aa3.9□□□□□ -1.79
TMEM260-209ENST00000556079 C2orf88Q9BSF0 95 aa3.9□□□□□ -1.79
TMEM260-209ENST00000556079 XAGE1AQ9HD64 81 aa3.9□□□□□ -1.79
TMEM260-209ENST00000556079 SCO1O75880 301 aa3.89□□□□□ -1.79
TMEM260-209ENST00000556079 MT-ND6P03923 174 aa3.89□□□□□ -1.79
TMEM260-209ENST00000556079 RHEBQ15382 184 aa3.89□□□□□ -1.79
TMEM260-209ENST00000556079 C1orf137Q5JT78 98 aa3.89□□□□□ -1.79
TMEM260-209ENST00000556079 FA2HQ7L5A8 372 aa3.89□□□□□ -1.79
TMEM260-209ENST00000556079 FAM19A3Q7Z5A8 133 aa3.89□□□□□ -1.79
TMEM260-209ENST00000556079 SLC7A5P1Q8MH63 180 aa3.89□□□□□ -1.79
TMEM260-209ENST00000556079 C18orf32Q8TCD1 76 aa3.89□□□□□ -1.79
TMEM260-209ENST00000556079 TIMM17AQ99595 171 aa3.89□□□□□ -1.79
TMEM260-209ENST00000556079 CST9LQ9H4G1 147 aa3.89□□□□□ -1.79
TMEM260-209ENST00000556079 LINC00474Q9P2X8 69 aa3.89□□□□□ -1.79
TMEM260-209ENST00000556079 TRAPPC1Q9Y5R8 145 aa3.89□□□□□ -1.79
TMEM260-209ENST00000556079 M0QXV9 152 aa3.88□□□□□ -1.79
TMEM260-209ENST00000556079 TLX1NBP0CAT3 122 aa3.88□□□□□ -1.79
TMEM260-209ENST00000556079 NDUFA6P56556 154 aa3.88□□□□□ -1.79
TMEM260-209ENST00000556079 ERASQ7Z444 233 aa3.88□□□□□ -1.79
TMEM260-209ENST00000556079 GEMIN7Q9H840 131 aaKnown RBP3.88□□□□□ -1.79
TMEM260-209ENST00000556079 NDUFC2-KCTD14E9PQ53 114 aa3.87□□□□□ -1.79
TMEM260-209ENST00000556079 PRSS2P07478 247 aa3.87□□□□□ -1.79
TMEM260-209ENST00000556079 KRTAP10-8P60410 259 aa3.87□□□□□ -1.79
TMEM260-209ENST00000556079 RAB5BP61020 215 aa3.87□□□□□ -1.79
TMEM260-209ENST00000556079 C6orf226Q5I0X4 101 aa3.87□□□□□ -1.79
TMEM260-209ENST00000556079 Q8IZM0 81 aa3.87□□□□□ -1.79
TMEM260-209ENST00000556079 Q8NDZ9 215 aa3.87□□□□□ -1.79
TMEM260-209ENST00000556079 COX7B2Q8TF08 81 aa3.87□□□□□ -1.79
TMEM260-209ENST00000556079 PACRGQ96M98 296 aaPredicted RBP3.87□□□□□ -1.79
TMEM260-209ENST00000556079 LINC01600Q96MT4 127 aa3.87□□□□□ -1.79
TMEM260-209ENST00000556079 SMCO4Q9NRQ5 59 aa3.87□□□□□ -1.79
TMEM260-209ENST00000556079 FAT4Q6V0I7 4981 aa3.87□□□□□ -1.79
TMEM260-209ENST00000556079 IGLV5-45A0A087WSX0 123 aa3.86□□□□□ -1.79
TMEM260-209ENST00000556079 TRBV30A0A0K0K1B3 111 aa3.86□□□□□ -1.79
TMEM260-209ENST00000556079 TINCRA0A1B0GVN0 87 aa3.86□□□□□ -1.79
TMEM260-209ENST00000556079 C11orf86A6NJI1 115 aa3.86□□□□□ -1.79
TMEM260-209ENST00000556079 K7EMI3 77 aa3.86□□□□□ -1.79
TMEM260-209ENST00000556079 IGLV7-43P04211 117 aa3.86□□□□□ -1.79
TMEM260-209ENST00000556079 ZNF22P17026 224 aaPredicted RBP3.86□□□□□ -1.79
TMEM260-209ENST00000556079 CKS1BP61024 79 aa3.86□□□□□ -1.79
TMEM260-209ENST00000556079 HERVK_113P63121 156 aa3.86□□□□□ -1.79
TMEM260-209ENST00000556079 PDZD11Q5EBL8 140 aa3.86□□□□□ -1.79
TMEM260-209ENST00000556079 SPINK6Q6UWN8 80 aa3.86□□□□□ -1.79
TMEM260-209ENST00000556079 PET117Q6UWS5 81 aa3.86□□□□□ -1.79
TMEM260-209ENST00000556079 LINC01561Q8N1V8 128 aa3.86□□□□□ -1.79
TMEM260-209ENST00000556079 PRR26Q8N8Z3 221 aa3.86□□□□□ -1.79
TMEM260-209ENST00000556079 A4D1N5 150 aa3.85□□□□□ -1.79
TMEM260-209ENST00000556079 RPL37AP8A6NKH3 93 aa3.85□□□□□ -1.79
TMEM260-209ENST00000556079 F8VRH5 84 aa3.85□□□□□ -1.79
TMEM260-209ENST00000556079 F8WDY8 70 aa3.85□□□□□ -1.79
TMEM260-209ENST00000556079 NPSP0C0P6 89 aa3.85□□□□□ -1.79
TMEM260-209ENST00000556079 LINC00614P0C842 121 aa3.85□□□□□ -1.79
TMEM260-209ENST00000556079 IGLC3P0DOY3 106 aa3.85□□□□□ -1.79
TMEM260-209ENST00000556079 UBE2BP63146 152 aa3.85□□□□□ -1.79
TMEM260-209ENST00000556079 PMVKQ15126 192 aa3.85□□□□□ -1.79
TMEM260-209ENST00000556079 FAM19A2Q8N3H0 131 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms