RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 C12orf57Q99622 126 aa7.28□□□□□ -1.24
TMEM260-208ENST00000555905 SFTA2Q6UW10 78 aa7.27□□□□□ -1.25
TMEM260-208ENST00000555905 F8WDY8 70 aa7.26□□□□□ -1.25
TMEM260-208ENST00000555905 CXCL5P42830 114 aa7.26□□□□□ -1.25
TMEM260-208ENST00000555905 TSPEAR-AS2P59090 65 aa7.26□□□□□ -1.25
TMEM260-208ENST00000555905 KIAA0087Q14695 138 aa7.26□□□□□ -1.25
TMEM260-208ENST00000555905 LINC00518Q8N0U6 118 aa7.26□□□□□ -1.25
TMEM260-208ENST00000555905 NDUFA12Q9UI09 145 aa7.26□□□□□ -1.25
TMEM260-208ENST00000555905 MYMXA0A1B0GTQ4 84 aa7.25□□□□□ -1.25
TMEM260-208ENST00000555905 LRCOL1A6NCL2 159 aa7.25□□□□□ -1.25
TMEM260-208ENST00000555905 ZNF815PA8K554 130 aa7.25□□□□□ -1.25
TMEM260-208ENST00000555905 NDUFA1O15239 70 aa7.25□□□□□ -1.25
TMEM260-208ENST00000555905 WFDC2Q14508 124 aa7.25□□□□□ -1.25
TMEM260-208ENST00000555905 NTN5Q8WTR8 489 aaPredicted RBP7.25□□□□□ -1.25
TMEM260-208ENST00000555905 LINC00526Q96FQ7 95 aa7.25□□□□□ -1.25
TMEM260-208ENST00000555905 C2orf48Q96LS8 159 aa7.25□□□□□ -1.25
TMEM260-208ENST00000555905 CAMK2N2Q96S95 79 aa7.25□□□□□ -1.25
TMEM260-208ENST00000555905 HYDINQ4G0P3 5121 aa7.25□□□□□ -1.25
TMEM260-208ENST00000555905 SACSQ9NZJ4 4579 aa7.25□□□□□ -1.25
TMEM260-208ENST00000555905 A0A087WTM6 91 aa7.24□□□□□ -1.25
TMEM260-208ENST00000555905 RTL8CO15255 209 aa7.24□□□□□ -1.25
TMEM260-208ENST00000555905 COX8AP10176 69 aa7.24□□□□□ -1.25
TMEM260-208ENST00000555905 HERV-K104P63124 156 aa7.24□□□□□ -1.25
TMEM260-208ENST00000555905 C2orf82Q6UX34 121 aa7.24□□□□□ -1.25
TMEM260-208ENST00000555905 PCP2Q8IVA1 136 aa7.24□□□□□ -1.25
TMEM260-208ENST00000555905 ZNF625Q96I27 306 aaPredicted RBP7.24□□□□□ -1.25
TMEM260-208ENST00000555905 C14orf144Q96I85 54 aa7.24□□□□□ -1.25
TMEM260-208ENST00000555905 DNAH10Q8IVF4 4471 aa7.23□□□□□ -1.25
TMEM260-208ENST00000555905 SYCNQ0VAF6 134 aa7.23□□□□□ -1.25
TMEM260-208ENST00000555905 TTTY13Q9BZ97 58 aa7.23□□□□□ -1.25
TMEM260-208ENST00000555905 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.22□□□□□ -1.25
TMEM260-208ENST00000555905 SLC25A34Q6PIV7 304 aa7.22□□□□□ -1.25
TMEM260-208ENST00000555905 UNQ6190/PRO20217Q6UXQ8 127 aa7.22□□□□□ -1.25
TMEM260-208ENST00000555905 SCGB1D4Q6XE38 83 aa7.22□□□□□ -1.25
TMEM260-208ENST00000555905 BOD1L2Q8IYS8 172 aa7.22□□□□□ -1.25
TMEM260-208ENST00000555905 Q8N814 137 aa7.22□□□□□ -1.25
TMEM260-208ENST00000555905 DNAH2Q9P225 4427 aa7.21□□□□□ -1.25
TMEM260-208ENST00000555905 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.21□□□□□ -1.26
TMEM260-208ENST00000555905 TRBV30A0A0K0K1B3 111 aa7.21□□□□□ -1.26
TMEM260-208ENST00000555905 LINC00587B1AMM8 73 aa7.21□□□□□ -1.26
TMEM260-208ENST00000555905 DLEU1O43261 78 aa7.21□□□□□ -1.26
TMEM260-208ENST00000555905 CARD19Q96LW7 228 aa7.21□□□□□ -1.26
TMEM260-208ENST00000555905 A0A0J9YXY3 114 aa7.2□□□□□ -1.26
TMEM260-208ENST00000555905 TSTD3H0UI37 97 aa7.2□□□□□ -1.26
TMEM260-208ENST00000555905 CNBPP62633 177 aaKnown RBP7.2□□□□□ -1.26
TMEM260-208ENST00000555905 CIRBPQ14011 172 aaKnown RBP7.2□□□□□ -1.26
TMEM260-208ENST00000555905 MEIG1Q5JSS6 88 aa7.2□□□□□ -1.26
TMEM260-208ENST00000555905 C10orf25Q5T742 122 aa7.2□□□□□ -1.26
TMEM260-208ENST00000555905 Q6ZRU5 148 aa7.2□□□□□ -1.26
TMEM260-208ENST00000555905 LINC00336Q6ZUF6 198 aa7.2□□□□□ -1.26
TMEM260-208ENST00000555905 PRO1933Q9H354 126 aa7.2□□□□□ -1.26
TMEM260-208ENST00000555905 UQCR10Q9UDW1 63 aa7.2□□□□□ -1.26
TMEM260-208ENST00000555905 SLPIP03973 132 aa7.19□□□□□ -1.26
TMEM260-208ENST00000555905 RNF151Q2KHN1 245 aa7.19□□□□□ -1.26
TMEM260-208ENST00000555905 C6orf48Q9UBA6 75 aa7.19□□□□□ -1.26
TMEM260-208ENST00000555905 ERG28Q9UKR5 140 aa7.19□□□□□ -1.26
TMEM260-208ENST00000555905 FRAS1Q86XX4 4008 aa7.18□□□□□ -1.26
TMEM260-208ENST00000555905 COX17Q14061 63 aa7.18□□□□□ -1.26
TMEM260-208ENST00000555905 MIEN1Q9BRT3 115 aa7.18□□□□□ -1.26
TMEM260-208ENST00000555905 KMT2CQ8NEZ4 4911 aaKnown RBP7.18□□□□□ -1.26
TMEM260-208ENST00000555905 RYR2Q92736 4967 aa7.18□□□□□ -1.26
TMEM260-208ENST00000555905 DNAH17Q9UFH2 4485 aa7.17□□□□□ -1.26
TMEM260-208ENST00000555905 TMEM238C9JI98 176 aa7.17□□□□□ -1.26
TMEM260-208ENST00000555905 TIMM17BO60830 172 aa7.17□□□□□ -1.26
TMEM260-208ENST00000555905 SMIM13P0DJ93 91 aa7.17□□□□□ -1.26
TMEM260-208ENST00000555905 PFN2P35080 140 aa7.17□□□□□ -1.26
TMEM260-208ENST00000555905 LINC00158P58513 81 aa7.17□□□□□ -1.26
TMEM260-208ENST00000555905 C9orf116Q5BN46 136 aaPredicted RBP7.17□□□□□ -1.26
TMEM260-208ENST00000555905 TP73-AS1Q9UF72 201 aa7.17□□□□□ -1.26
TMEM260-208ENST00000555905 PKIGQ9Y2B9 76 aa7.17□□□□□ -1.26
TMEM260-208ENST00000555905 IGLV5-52A0A0A0MRZ9 124 aa7.15□□□□□ -1.26
TMEM260-208ENST00000555905 A0A0U1RRA0 63 aa7.15□□□□□ -1.26
TMEM260-208ENST00000555905 NDUFC2-KCTD14E9PQ53 114 aa7.15□□□□□ -1.26
TMEM260-208ENST00000555905 HNRNPA3P51991 378 aaKnown RBP7.15□□□□□ -1.26
TMEM260-208ENST00000555905 C9orf163Q8N9P6 203 aa7.15□□□□□ -1.26
TMEM260-208ENST00000555905 HIGD1BQ9P298 99 aa7.15□□□□□ -1.26
TMEM260-208ENST00000555905 LOC107984640A0A0U1RRK4 108 aa7.14□□□□□ -1.27
TMEM260-208ENST00000555905 TLX1NBP0CAT3 122 aa7.14□□□□□ -1.27
TMEM260-208ENST00000555905 RPL18AQ02543 176 aaKnown RBP7.14□□□□□ -1.27
TMEM260-208ENST00000555905 SRSF9Q13242 221 aaKnown RBP eCLIP7.14□□□□□ -1.27
TMEM260-208ENST00000555905 C2orf91Q6ZV80 131 aa7.14□□□□□ -1.27
TMEM260-208ENST00000555905 GCSHP23434 173 aa7.13□□□□□ -1.27
TMEM260-208ENST00000555905 ADAMTSL4-AS1Q5T5F5 129 aa7.13□□□□□ -1.27
TMEM260-208ENST00000555905 Q6ZVH6 145 aa7.13□□□□□ -1.27
TMEM260-208ENST00000555905 MIR7-3HGQ8N6C7 128 aa7.13□□□□□ -1.27
TMEM260-208ENST00000555905 DAND5Q8N907 189 aa7.13□□□□□ -1.27
TMEM260-208ENST00000555905 COPS9Q8WXC6 57 aa7.13□□□□□ -1.27
TMEM260-208ENST00000555905 HIST1H4GQ99525 98 aa7.13□□□□□ -1.27
TMEM260-208ENST00000555905 LITAFQ99732 161 aa7.13□□□□□ -1.27
TMEM260-208ENST00000555905 SPANXDQ9BXN6 97 aa7.13□□□□□ -1.27
TMEM260-208ENST00000555905 SPANXB1Q9NS25 103 aaPredicted RBP7.13□□□□□ -1.27
TMEM260-208ENST00000555905 SPANXCQ9NY87 97 aa7.13□□□□□ -1.27
TMEM260-208ENST00000555905 FUSP35637 526 aaKnown RBP eCLIP7.11□□□□□ -1.27
TMEM260-208ENST00000555905 KRTAP10-2P60368 255 aa7.11□□□□□ -1.27
TMEM260-208ENST00000555905 GAGE2BQ13066 116 aa7.11□□□□□ -1.27
TMEM260-208ENST00000555905 GAGE2EQ4V326 116 aa7.11□□□□□ -1.27
TMEM260-208ENST00000555905 Q6ZRP5 223 aa7.11□□□□□ -1.27
TMEM260-208ENST00000555905 SND1-IT1Q9HBX3 110 aa7.11□□□□□ -1.27
TMEM260-208ENST00000555905 GAGE2DQ9UEU5 116 aa7.11□□□□□ -1.27
TMEM260-208ENST00000555905 FAT2Q9NYQ8 4349 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms