RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 PEA15Q15121 130 aa11.38□□□□□ -0.59
FOXN3-211ENST00000555855 C9JQL5 133 aa11.37□□□□□ -0.59
FOXN3-211ENST00000555855 F8VRH5 84 aa11.37□□□□□ -0.59
FOXN3-211ENST00000555855 ATP5L2Q7Z4Y8 100 aa11.37□□□□□ -0.59
FOXN3-211ENST00000555855 LAMTOR2Q9Y2Q5 125 aa11.37□□□□□ -0.59
FOXN3-211ENST00000555855 RPL37AP8A6NKH3 93 aa11.36□□□□□ -0.59
FOXN3-211ENST00000555855 NPSP0C0P6 89 aa11.36□□□□□ -0.59
FOXN3-211ENST00000555855 HERVK_113P63121 156 aa11.36□□□□□ -0.59
FOXN3-211ENST00000555855 LINC00173Q6ZV60 143 aa11.36□□□□□ -0.59
FOXN3-211ENST00000555855 Q8N8P6 123 aa11.36□□□□□ -0.59
FOXN3-211ENST00000555855 LINC00167Q96N53 147 aa11.36□□□□□ -0.59
FOXN3-211ENST00000555855 CDIP1Q9H305 208 aa11.36□□□□□ -0.59
FOXN3-211ENST00000555855 ANAPC11Q9NYG5 84 aa11.36□□□□□ -0.59
FOXN3-211ENST00000555855 ORMDL2Q53FV1 153 aa11.35□□□□□ -0.59
FOXN3-211ENST00000555855 PAPPA-AS1Q5QFB9 102 aa11.35□□□□□ -0.59
FOXN3-211ENST00000555855 FAM19A3Q7Z5A8 133 aa11.35□□□□□ -0.59
FOXN3-211ENST00000555855 GEMIN7Q9H840 131 aaKnown RBP11.35□□□□□ -0.59
FOXN3-211ENST00000555855 KRTAP9-6A0A140TA67 174 aa11.34□□□□□ -0.59
FOXN3-211ENST00000555855 CXCL5P42830 114 aa11.34□□□□□ -0.59
FOXN3-211ENST00000555855 RETNLBQ9BQ08 111 aa11.34□□□□□ -0.59
FOXN3-211ENST00000555855 UBE2AP49459 152 aa11.33□□□□□ -0.6
FOXN3-211ENST00000555855 LINC00304Q8N9R0 145 aa11.33□□□□□ -0.6
FOXN3-211ENST00000555855 CDKN2A-AS1Q9UH64 79 aa11.33□□□□□ -0.6
FOXN3-211ENST00000555855 IGIPA6NJ69 53 aa11.32□□□□□ -0.6
FOXN3-211ENST00000555855 SRSF3P84103 164 aaKnown RBP11.32□□□□□ -0.6
FOXN3-211ENST00000555855 GAGE10A6NGK3 116 aa11.31□□□□□ -0.6
FOXN3-211ENST00000555855 K7EMI3 77 aa11.31□□□□□ -0.6
FOXN3-211ENST00000555855 G0S2P27469 103 aa11.31□□□□□ -0.6
FOXN3-211ENST00000555855 FAM229BQ4G0N7 80 aa11.31□□□□□ -0.6
FOXN3-211ENST00000555855 KRTAP13-2Q52LG2 175 aa11.31□□□□□ -0.6
FOXN3-211ENST00000555855 hCG_2014768A0A024R1R8 64 aa11.3□□□□□ -0.6
FOXN3-211ENST00000555855 IGKV2D-26A0A0A0MRZ7 120 aa11.3□□□□□ -0.6
FOXN3-211ENST00000555855 IGLV7-46A0A075B6I9 117 aa11.29□□□□□ -0.6
FOXN3-211ENST00000555855 TPRXLQ17RH7 258 aa11.29□□□□□ -0.6
FOXN3-211ENST00000555855 NKAPP1Q8N9T2 125 aa11.29□□□□□ -0.6
FOXN3-211ENST00000555855 CTAG1AP78358 180 aa11.27□□□□□ -0.61
FOXN3-211ENST00000555855 RAB5BP61020 215 aa11.26□□□□□ -0.61
FOXN3-211ENST00000555855 PDZD11Q5EBL8 140 aa11.26□□□□□ -0.61
FOXN3-211ENST00000555855 COX7B2Q8TF08 81 aa11.26□□□□□ -0.61
FOXN3-211ENST00000555855 NXT2Q9NPJ8 142 aaKnown RBP11.26□□□□□ -0.61
FOXN3-211ENST00000555855 MUC17Q685J3 4493 aa11.26□□□□□ -0.61
FOXN3-211ENST00000555855 IGLV5-37A0A075B6J1 123 aa11.25□□□□□ -0.61
FOXN3-211ENST00000555855 PNRC1Q12796 327 aaPredicted RBP11.25□□□□□ -0.61
FOXN3-211ENST00000555855 KRTAP13-1Q8IUC0 172 aa11.25□□□□□ -0.61
FOXN3-211ENST00000555855 TIMM17AQ99595 171 aa11.25□□□□□ -0.61
FOXN3-211ENST00000555855 SMIM1B2RUZ4 78 aa11.23□□□□□ -0.61
FOXN3-211ENST00000555855 TOMM6Q96B49 74 aa11.22□□□□□ -0.61
FOXN3-211ENST00000555855 IGKV2-28A0A075B6P5 120 aa11.21□□□□□ -0.61
FOXN3-211ENST00000555855 IGKV2D-28P01615 120 aa11.21□□□□□ -0.61
FOXN3-211ENST00000555855 ERASQ7Z444 233 aa11.21□□□□□ -0.61
FOXN3-211ENST00000555855 SCGB3A1Q96QR1 104 aa11.21□□□□□ -0.61
FOXN3-211ENST00000555855 TINCRA0A1B0GVN0 87 aa11.2□□□□□ -0.62
FOXN3-211ENST00000555855 ANAPC16Q96DE5 110 aa11.2□□□□□ -0.62
FOXN3-211ENST00000555855 PPDPFQ9H3Y8 114 aa11.2□□□□□ -0.62
FOXN3-211ENST00000555855 MT-ND4LP03901 98 aa11.19□□□□□ -0.62
FOXN3-211ENST00000555855 FAM19A1Q7Z5A9 133 aa11.19□□□□□ -0.62
FOXN3-211ENST00000555855 PRLHP81277 87 aa11.18□□□□□ -0.62
FOXN3-211ENST00000555855 IGLV5-45A0A087WSX0 123 aa11.16□□□□□ -0.62
FOXN3-211ENST00000555855 SCO1O75880 301 aa11.16□□□□□ -0.62
FOXN3-211ENST00000555855 ATP5LO75964 103 aa11.16□□□□□ -0.62
FOXN3-211ENST00000555855 SPINK8P0C7L1 97 aa11.16□□□□□ -0.62
FOXN3-211ENST00000555855 SPAG11AQ6PDA7 123 aa11.16□□□□□ -0.62
FOXN3-211ENST00000555855 LINC01549A6NIU2 74 aa11.15□□□□□ -0.62
FOXN3-211ENST00000555855 MRPL18Q9H0U6 180 aaKnown RBP11.15□□□□□ -0.62
FOXN3-211ENST00000555855 PFN2P35080 140 aa11.14□□□□□ -0.63
FOXN3-211ENST00000555855 LINC00337Q8N6G1 96 aa11.14□□□□□ -0.63
FOXN3-211ENST00000555855 TMEM126AQ9H061 195 aa11.14□□□□□ -0.63
FOXN3-211ENST00000555855 H3BRM9 83 aa11.13□□□□□ -0.63
FOXN3-211ENST00000555855 ADCYAP1P18509 176 aa11.13□□□□□ -0.63
FOXN3-211ENST00000555855 RPL24P83731 157 aaKnown RBP11.13□□□□□ -0.63
FOXN3-211ENST00000555855 C4orf48Q5BLP8 95 aa11.13□□□□□ -0.63
FOXN3-211ENST00000555855 CBLN2Q8IUK8 224 aa11.13□□□□□ -0.63
FOXN3-211ENST00000555855 PLEKHB2Q96CS7 222 aa11.13□□□□□ -0.63
FOXN3-211ENST00000555855 GNB1LQ9BYB4 327 aa11.13□□□□□ -0.63
FOXN3-211ENST00000555855 CST9LQ9H4G1 147 aa11.13□□□□□ -0.63
FOXN3-211ENST00000555855 TMEM238C9JI98 176 aa11.12□□□□□ -0.63
FOXN3-211ENST00000555855 KIAA1644Q3SXP7 199 aa11.11□□□□□ -0.63
FOXN3-211ENST00000555855 C3orf22Q8N5N4 141 aa11.11□□□□□ -0.63
FOXN3-211ENST00000555855 VPREB1P12018 145 aa11.1□□□□□ -0.63
FOXN3-211ENST00000555855 PMVKQ15126 192 aa11.1□□□□□ -0.63
FOXN3-211ENST00000555855 FP248Q71RG6 208 aaPredicted RBP11.1□□□□□ -0.63
FOXN3-211ENST00000555855 LINC01547P58512 204 aaPredicted RBP11.09□□□□□ -0.63
FOXN3-211ENST00000555855 M0R378 163 aa11.08□□□□□ -0.64
FOXN3-211ENST00000555855 HIGD2AQ9BW72 106 aa11.08□□□□□ -0.64
FOXN3-211ENST00000555855 SND1-IT1Q9HBX3 110 aa11.08□□□□□ -0.64
FOXN3-211ENST00000555855 RAB14P61106 215 aa11.07□□□□□ -0.64
FOXN3-211ENST00000555855 COX17Q14061 63 aa11.06□□□□□ -0.64
FOXN3-211ENST00000555855 ERG28Q9UKR5 140 aa11.06□□□□□ -0.64
FOXN3-211ENST00000555855 ASB16-AS1Q495Z4 193 aa11.03□□□□□ -0.64
FOXN3-211ENST00000555855 SPRR4Q96PI1 79 aa11.03□□□□□ -0.64
FOXN3-211ENST00000555855 ZNF706Q9Y5V0 76 aaPredicted RBP11.03□□□□□ -0.64
FOXN3-211ENST00000555855 IGLV5-39A0A0G2JS06 123 aa11.02□□□□□ -0.65
FOXN3-211ENST00000555855 LINC01546A6NGU7 62 aa11.02□□□□□ -0.65
FOXN3-211ENST00000555855 NDUFA6P56556 154 aa11.02□□□□□ -0.65
FOXN3-211ENST00000555855 FA2HQ7L5A8 372 aa11.01□□□□□ -0.65
FOXN3-211ENST00000555855 ZNF625Q96I27 306 aaPredicted RBP11.01□□□□□ -0.65
FOXN3-211ENST00000555855 SMCO4Q9NRQ5 59 aa11.01□□□□□ -0.65
FOXN3-211ENST00000555855 IGLC3P0DOY3 106 aa11□□□□□ -0.65
FOXN3-211ENST00000555855 SEC61BP60468 96 aaKnown RBP11□□□□□ -0.65
FOXN3-211ENST00000555855 KRTAP13-3Q3SY46 172 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms