RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 FAM223BA6NKX1 122 aa-0.7□□□□□ -2.52
SRP54-207ENST00000555535 SSSCA1O60232 199 aa-0.7□□□□□ -2.52
SRP54-207ENST00000555535 TRAPPC2P0DI81 140 aa-0.7□□□□□ -2.52
SRP54-207ENST00000555535 TRAPPC2BP0DI82 140 aa-0.7□□□□□ -2.52
SRP54-207ENST00000555535 WHAMMP3Q1A5X7 153 aa-0.7□□□□□ -2.52
SRP54-207ENST00000555535 C5orf38Q86SI9 138 aa-0.7□□□□□ -2.52
SRP54-207ENST00000555535 C8orf59Q8N0T1 100 aaPredicted RBP-0.7□□□□□ -2.52
SRP54-207ENST00000555535 FAM167A-AS1Q96KT0 104 aa-0.7□□□□□ -2.52
SRP54-207ENST00000555535 SPRR4Q96PI1 79 aa-0.7□□□□□ -2.52
SRP54-207ENST00000555535 MBD5Q9P267 1494 aa-0.7□□□□□ -2.52
SRP54-207ENST00000555535 QRICH2Q9H0J4 1663 aa-0.7□□□□□ -2.52
SRP54-207ENST00000555535 EHBP1L1Q8N3D4 1523 aa-0.7□□□□□ -2.52
SRP54-207ENST00000555535 EPG5Q9HCE0 2579 aa-0.71□□□□□ -2.52
SRP54-207ENST00000555535 MON2Q7Z3U7 1717 aa-0.71□□□□□ -2.52
SRP54-207ENST00000555535 OOSP1A8MZH6 123 aa-0.71□□□□□ -2.52
SRP54-207ENST00000555535 C9orf153Q5TBE3 101 aa-0.71□□□□□ -2.52
SRP54-207ENST00000555535 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.71□□□□□ -2.52
SRP54-207ENST00000555535 CDC42SE2Q9NRR3 84 aa-0.71□□□□□ -2.52
SRP54-207ENST00000555535 BCORQ6W2J9 1755 aa-0.71□□□□□ -2.52
SRP54-207ENST00000555535 SMG6Q86US8 1419 aaKnown RBP-0.72□□□□□ -2.52
SRP54-207ENST00000555535 NBPF19A0A087WUL8 3843 aa-0.72□□□□□ -2.52
SRP54-207ENST00000555535 PLEKHH2Q8IVE3 1493 aa-0.72□□□□□ -2.52
SRP54-207ENST00000555535 A0A1B0GU69 56 aa-0.72□□□□□ -2.52
SRP54-207ENST00000555535 SNAPC5O75971 98 aa-0.72□□□□□ -2.52
SRP54-207ENST00000555535 SNCAP37840 140 aa-0.72□□□□□ -2.52
SRP54-207ENST00000555535 Q0VG73 95 aa-0.72□□□□□ -2.52
SRP54-207ENST00000555535 HEPN1Q6WQI6 88 aa-0.72□□□□□ -2.52
SRP54-207ENST00000555535 FAM107BQ9H098 131 aa-0.72□□□□□ -2.52
SRP54-207ENST00000555535 CC2D2AQ9P2K1 1620 aa-0.72□□□□□ -2.52
SRP54-207ENST00000555535 COL4A6Q14031 1691 aa-0.72□□□□□ -2.53
SRP54-207ENST00000555535 KTN1Q86UP2 1357 aaKnown RBP-0.72□□□□□ -2.53
SRP54-207ENST00000555535 NAIPQ13075 1403 aa-0.72□□□□□ -2.53
SRP54-207ENST00000555535 A0A087WVE0 104 aa-0.73□□□□□ -2.53
SRP54-207ENST00000555535 H0YGG7 62 aa-0.73□□□□□ -2.53
SRP54-207ENST00000555535 I3L3M4 83 aa-0.73□□□□□ -2.53
SRP54-207ENST00000555535 SELENOWP63302 87 aa-0.73□□□□□ -2.53
SRP54-207ENST00000555535 CCDC58Q4VC31 144 aa-0.73□□□□□ -2.53
SRP54-207ENST00000555535 C12orf57Q99622 126 aa-0.73□□□□□ -2.53
SRP54-207ENST00000555535 EPPK1P58107 5090 aaKnown RBP-0.73□□□□□ -2.53
SRP54-207ENST00000555535 CHD1O14646 1710 aa-0.73□□□□□ -2.53
SRP54-207ENST00000555535 ABCA3Q99758 1704 aa-0.73□□□□□ -2.53
SRP54-207ENST00000555535 ADGRL2O95490 1459 aa-0.73□□□□□ -2.53
SRP54-207ENST00000555535 SLIT1O75093 1534 aa-0.74□□□□□ -2.53
SRP54-207ENST00000555535 SONP18583 2426 aaKnown RBP-0.74□□□□□ -2.53
SRP54-207ENST00000555535 TRAV30A0A087WSZ9 112 aa-0.74□□□□□ -2.53
SRP54-207ENST00000555535 UBE2L5PA0A1B0GUS4 154 aa-0.74□□□□□ -2.53
SRP54-207ENST00000555535 F6UZH7 168 aa-0.74□□□□□ -2.53
SRP54-207ENST00000555535 AKAIN1P0CW23 69 aa-0.74□□□□□ -2.53
SRP54-207ENST00000555535 UBE2D3P61077 147 aa-0.74□□□□□ -2.53
SRP54-207ENST00000555535 UBE2D2P62837 147 aa-0.74□□□□□ -2.53
SRP54-207ENST00000555535 UBE2L3P68036 154 aaKnown RBP-0.74□□□□□ -2.53
SRP54-207ENST00000555535 C9orf62Q8N4C0 152 aa-0.74□□□□□ -2.53
SRP54-207ENST00000555535 LYSTQ99698 3801 aa-0.74□□□□□ -2.53
SRP54-207ENST00000555535 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.74□□□□□ -2.532e-14■■■■■ 29.1
SRP54-207ENST00000555535 NKTRP30414 1462 aaKnown RBP-0.74□□□□□ -2.53
SRP54-207ENST00000555535 PDE4DIPQ5VU43 2346 aa-0.75□□□□□ -2.53
SRP54-207ENST00000555535 KIAA1551Q9HCM1 1747 aa-0.75□□□□□ -2.53
SRP54-207ENST00000555535 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.75□□□□□ -2.53
SRP54-207ENST00000555535 DNAH6Q9C0G6 4158 aa-0.75□□□□□ -2.53
SRP54-207ENST00000555535 HSD52Q0P140 79 aa-0.75□□□□□ -2.53
SRP54-207ENST00000555535 TSC22D3Q99576 134 aa-0.75□□□□□ -2.53
SRP54-207ENST00000555535 PAIP2BQ9ULR5 123 aaKnown RBP-0.75□□□□□ -2.53
SRP54-207ENST00000555535 SCAPERQ9BY12 1400 aa-0.75□□□□□ -2.53
SRP54-207ENST00000555535 CCDC141Q6ZP82 1450 aa-0.75□□□□□ -2.53
SRP54-207ENST00000555535 ITPR3Q14573 2671 aa-0.75□□□□□ -2.53
SRP54-207ENST00000555535 NALCNQ8IZF0 1738 aa-0.75□□□□□ -2.53
SRP54-207ENST00000555535 FAM24AA6NFZ4 105 aa-0.76□□□□□ -2.53
SRP54-207ENST00000555535 CRYM-AS1A6NIL9 109 aa-0.76□□□□□ -2.53
SRP54-207ENST00000555535 COX6CP09669 75 aa-0.76□□□□□ -2.53
SRP54-207ENST00000555535 FGF7P21781 194 aa-0.76□□□□□ -2.53
SRP54-207ENST00000555535 LELP1Q5T871 98 aa-0.76□□□□□ -2.53
SRP54-207ENST00000555535 C6orf201Q7Z4U5 140 aa-0.76□□□□□ -2.53
SRP54-207ENST00000555535 DEFB107AQ8IZN7 70 aa-0.76□□□□□ -2.53
SRP54-207ENST00000555535 PRO1854Q9UHT4 67 aa-0.76□□□□□ -2.53
SRP54-207ENST00000555535 TARBP1Q13395 1621 aaKnown RBP-0.76□□□□□ -2.53
SRP54-207ENST00000555535 C5P01031 1676 aa-0.76□□□□□ -2.53
SRP54-207ENST00000555535 FASNP49327 2511 aaKnown RBP-0.76□□□□□ -2.53
SRP54-207ENST00000555535 BIRC6Q9NR09 4857 aa-0.76□□□□□ -2.53
SRP54-207ENST00000555535 LRRC37AA6NMS7 1700 aa-0.77□□□□□ -2.53
SRP54-207ENST00000555535 DIP2CQ9Y2E4 1556 aa-0.77□□□□□ -2.53
SRP54-207ENST00000555535 NAP1L6A6NFF2 107 aa-0.77□□□□□ -2.53
SRP54-207ENST00000555535 NDUFA2O43678 99 aa-0.77□□□□□ -2.53
SRP54-207ENST00000555535 ASIPP42127 132 aa-0.77□□□□□ -2.53
SRP54-207ENST00000555535 ATP5EP56381 51 aaPredicted RBP-0.77□□□□□ -2.53
SRP54-207ENST00000555535 GNGT1P63211 74 aa-0.77□□□□□ -2.53
SRP54-207ENST00000555535 BTG2P78543 158 aa-0.77□□□□□ -2.53
SRP54-207ENST00000555535 DPH3P1Q9H4G8 78 aa-0.77□□□□□ -2.53
SRP54-207ENST00000555535 NIPBLQ6KC79 2804 aaeCLIP-0.77□□□□□ -2.53
SRP54-207ENST00000555535 PKD1P98161 4303 aa-0.77□□□□□ -2.53
SRP54-207ENST00000555535 UBR3Q6ZT12 1888 aa-0.78□□□□□ -2.53
SRP54-207ENST00000555535 SHPRHQ149N8 1683 aa-0.78□□□□□ -2.53
SRP54-207ENST00000555535 A2ML1A8K2U0 1454 aa-0.78□□□□□ -2.53
SRP54-207ENST00000555535 K7EP13 123 aa-0.78□□□□□ -2.53
SRP54-207ENST00000555535 SAA2P0DJI9 122 aaPredicted RBP-0.78□□□□□ -2.53
SRP54-207ENST00000555535 PP6455Q8WZ26 134 aa-0.78□□□□□ -2.53
SRP54-207ENST00000555535 MRPL34Q9BQ48 92 aaKnown RBP-0.78□□□□□ -2.53
SRP54-207ENST00000555535 VAMP8Q9BV40 100 aa-0.78□□□□□ -2.53
SRP54-207ENST00000555535 TOPAZ1Q8N9V7 1692 aa-0.78□□□□□ -2.53
SRP54-207ENST00000555535 ACACAQ13085 2346 aa-0.78□□□□□ -2.53
SRP54-207ENST00000555535 ADAMTS12P58397 1594 aa-0.79□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms