RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 CDKN2A-AS1Q9UH64 79 aa4.21□□□□□ -1.74
LINC00643-203ENST00000555518 IGHV3OR16-9A0A0B4J2B5 98 aa4.2□□□□□ -1.74
LINC00643-203ENST00000555518 IGKV3OR2-268A0A0C4DH90 116 aa4.2□□□□□ -1.74
LINC00643-203ENST00000555518 E9PLD3 99 aa4.2□□□□□ -1.74
LINC00643-203ENST00000555518 ANGP03950 147 aaKnown RBP4.2□□□□□ -1.74
LINC00643-203ENST00000555518 CCL18P55774 89 aa4.2□□□□□ -1.74
LINC00643-203ENST00000555518 TCTAP57738 103 aa4.2□□□□□ -1.74
LINC00643-203ENST00000555518 HERVK_113P63121 156 aa4.2□□□□□ -1.74
LINC00643-203ENST00000555518 S100A12P80511 92 aa4.2□□□□□ -1.74
LINC00643-203ENST00000555518 ZFAND6Q6FIF0 208 aa4.2□□□□□ -1.74
LINC00643-203ENST00000555518 PCP2Q8IVA1 136 aa4.2□□□□□ -1.74
LINC00643-203ENST00000555518 MUC7Q8TAX7 377 aa4.2□□□□□ -1.74
LINC00643-203ENST00000555518 KLK12Q9UKR0 248 aa4.2□□□□□ -1.74
LINC00643-203ENST00000555518 TRAV8-3A0A0A6YYJ7 113 aa4.19□□□□□ -1.74
LINC00643-203ENST00000555518 SMIM1B2RUZ4 78 aa4.19□□□□□ -1.74
LINC00643-203ENST00000555518 CCL25O15444 150 aa4.19□□□□□ -1.74
LINC00643-203ENST00000555518 PRSS2P07478 247 aa4.19□□□□□ -1.74
LINC00643-203ENST00000555518 COX8AP10176 69 aa4.19□□□□□ -1.74
LINC00643-203ENST00000555518 TMEM170BQ5T4T1 132 aa4.19□□□□□ -1.74
LINC00643-203ENST00000555518 BOD1L2Q8IYS8 172 aa4.19□□□□□ -1.74
LINC00643-203ENST00000555518 LINC00469Q8N7U9 141 aa4.19□□□□□ -1.74
LINC00643-203ENST00000555518 CHCHD10Q8WYQ3 142 aaPredicted RBP4.19□□□□□ -1.74
LINC00643-203ENST00000555518 C14orf144Q96I85 54 aa4.19□□□□□ -1.74
LINC00643-203ENST00000555518 KLK5Q9Y337 293 aaPredicted RBP4.19□□□□□ -1.74
LINC00643-203ENST00000555518 HYDINQ4G0P3 5121 aa4.19□□□□□ -1.74
LINC00643-203ENST00000555518 A0A087WZ39 114 aa4.18□□□□□ -1.74
LINC00643-203ENST00000555518 IGHV1-58A0A0C4DH39 117 aa4.18□□□□□ -1.74
LINC00643-203ENST00000555518 HSBP1L1C9JCN9 74 aa4.18□□□□□ -1.74
LINC00643-203ENST00000555518 LEPROTO15243 131 aa4.18□□□□□ -1.74
LINC00643-203ENST00000555518 SIVA1O15304 175 aa4.18□□□□□ -1.74
LINC00643-203ENST00000555518 SPINK8P0C7L1 97 aa4.18□□□□□ -1.74
LINC00643-203ENST00000555518 SEC11AP67812 179 aa4.18□□□□□ -1.74
LINC00643-203ENST00000555518 CD164L2Q6UWJ8 174 aa4.18□□□□□ -1.74
LINC00643-203ENST00000555518 C2orf91Q6ZV80 131 aa4.18□□□□□ -1.74
LINC00643-203ENST00000555518 MAPKAPK5-AS1Q8N8E1 139 aa4.18□□□□□ -1.74
LINC00643-203ENST00000555518 GEMIN7Q9H840 131 aaKnown RBP4.18□□□□□ -1.74
LINC00643-203ENST00000555518 DNAH10Q8IVF4 4471 aa4.17□□□□□ -1.74
LINC00643-203ENST00000555518 IGLV10-54A0A075B6I4 117 aa4.17□□□□□ -1.74
LINC00643-203ENST00000555518 IGHV3-64A0A075B6Q5 118 aa4.17□□□□□ -1.74
LINC00643-203ENST00000555518 IBA57-AS1B1ANH7 110 aa4.17□□□□□ -1.74
LINC00643-203ENST00000555518 DLEU1O43261 78 aa4.17□□□□□ -1.74
LINC00643-203ENST00000555518 XCL1P47992 114 aa4.17□□□□□ -1.74
LINC00643-203ENST00000555518 NMUP48645 174 aa4.17□□□□□ -1.74
LINC00643-203ENST00000555518 SS18Q15532 418 aa4.17□□□□□ -1.74
LINC00643-203ENST00000555518 MIAQ16674 131 aa4.17□□□□□ -1.74
LINC00643-203ENST00000555518 LINC01561Q8N1V8 128 aa4.17□□□□□ -1.74
LINC00643-203ENST00000555518 UBE2WQ96B02 151 aa4.17□□□□□ -1.74
LINC00643-203ENST00000555518 MIEN1Q9BRT3 115 aa4.17□□□□□ -1.74
LINC00643-203ENST00000555518 Q9H8V8 135 aa4.17□□□□□ -1.74
LINC00643-203ENST00000555518 UQCR10Q9UDW1 63 aa4.17□□□□□ -1.74
LINC00643-203ENST00000555518 IGLV5-37A0A075B6J1 123 aa4.16□□□□□ -1.74
LINC00643-203ENST00000555518 TRAV8-4A0A0B4J246 113 aa4.16□□□□□ -1.74
LINC00643-203ENST00000555518 TSTD3H0UI37 97 aa4.16□□□□□ -1.74
LINC00643-203ENST00000555518 H3BRM9 83 aa4.16□□□□□ -1.74
LINC00643-203ENST00000555518 J3QQQ9 107 aa4.16□□□□□ -1.74
LINC00643-203ENST00000555518 HERVK_113P61574 105 aa4.16□□□□□ -1.74
LINC00643-203ENST00000555518 UBE2V1Q13404 147 aa4.16□□□□□ -1.74
LINC00643-203ENST00000555518 KIAA0087Q14695 138 aa4.16□□□□□ -1.74
LINC00643-203ENST00000555518 CASC10Q5T4H9 136 aa4.16□□□□□ -1.74
LINC00643-203ENST00000555518 SLC25A34Q6PIV7 304 aa4.16□□□□□ -1.74
LINC00643-203ENST00000555518 Q75L30 129 aa4.16□□□□□ -1.74
LINC00643-203ENST00000555518 C5orf38Q86SI9 138 aa4.16□□□□□ -1.74
LINC00643-203ENST00000555518 C10orf126Q8N4M7 172 aa4.16□□□□□ -1.74
LINC00643-203ENST00000555518 PLEKHB2Q96CS7 222 aa4.16□□□□□ -1.74
LINC00643-203ENST00000555518 RYR2Q92736 4967 aa4.15□□□□□ -1.74
LINC00643-203ENST00000555518 MYMXA0A1B0GTQ4 84 aa4.15□□□□□ -1.75
LINC00643-203ENST00000555518 LINC00587B1AMM8 73 aa4.15□□□□□ -1.75
LINC00643-203ENST00000555518 CRPP02741 224 aa4.15□□□□□ -1.75
LINC00643-203ENST00000555518 DDTP30046 118 aa4.15□□□□□ -1.75
LINC00643-203ENST00000555518 UBE2DNLQ8IWF7 75 aa4.15□□□□□ -1.75
LINC00643-203ENST00000555518 ZNF625Q96I27 306 aaPredicted RBP4.15□□□□□ -1.75
LINC00643-203ENST00000555518 PCP4L1A6NKN8 68 aa4.14□□□□□ -1.75
LINC00643-203ENST00000555518 ZNF815PA8K554 130 aa4.14□□□□□ -1.75
LINC00643-203ENST00000555518 K7EP13 123 aa4.14□□□□□ -1.75
LINC00643-203ENST00000555518 COX7A2LO14548 114 aa4.14□□□□□ -1.75
LINC00643-203ENST00000555518 NDUFA1O15239 70 aa4.14□□□□□ -1.75
LINC00643-203ENST00000555518 Q8IZM0 81 aa4.14□□□□□ -1.75
LINC00643-203ENST00000555518 C15orf56Q8N910 161 aa4.14□□□□□ -1.75
LINC00643-203ENST00000555518 LITAFQ99732 161 aa4.14□□□□□ -1.75
LINC00643-203ENST00000555518 HECTD4Q9Y4D8 3996 aa4.14□□□□□ -1.75
LINC00643-203ENST00000555518 FRAS1Q86XX4 4008 aa4.14□□□□□ -1.75
LINC00643-203ENST00000555518 A0A0J9YXY3 114 aa4.13□□□□□ -1.75
LINC00643-203ENST00000555518 NBDYA0A0U1RRE5 68 aa4.13□□□□□ -1.75
LINC00643-203ENST00000555518 C3orf84H3BNL1 204 aa4.13□□□□□ -1.75
LINC00643-203ENST00000555518 LGALS3P17931 250 aaKnown RBP4.13□□□□□ -1.75
LINC00643-203ENST00000555518 HNRNPA3P51991 378 aaKnown RBP4.13□□□□□ -1.75
LINC00643-203ENST00000555518 KRTAP10-12P60413 245 aa4.13□□□□□ -1.75
LINC00643-203ENST00000555518 Q6ZR54 194 aa4.13□□□□□ -1.75
LINC00643-203ENST00000555518 Q6ZRN7 208 aaPredicted RBP4.13□□□□□ -1.75
LINC00643-203ENST00000555518 COX7B2Q8TF08 81 aa4.13□□□□□ -1.75
LINC00643-203ENST00000555518 Q9HAA7 133 aa4.13□□□□□ -1.75
LINC00643-203ENST00000555518 HIGD1BQ9P298 99 aa4.13□□□□□ -1.75
LINC00643-203ENST00000555518 NDUFA12Q9UI09 145 aa4.13□□□□□ -1.75
LINC00643-203ENST00000555518 DNAH2Q9P225 4427 aa4.13□□□□□ -1.75
LINC00643-203ENST00000555518 SACSQ9NZJ4 4579 aa4.12□□□□□ -1.75
LINC00643-203ENST00000555518 IGKV2D-24A0A075B6R9 120 aa4.12□□□□□ -1.75
LINC00643-203ENST00000555518 VPREB1P12018 145 aa4.12□□□□□ -1.75
LINC00643-203ENST00000555518 CTAG1AP78358 180 aa4.12□□□□□ -1.75
LINC00643-203ENST00000555518 WFDC2Q14508 124 aa4.12□□□□□ -1.75
LINC00643-203ENST00000555518 ORAOV1Q8WV07 137 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms