RNA–Protein interactions for RNA: ENST00000555381.5

ATXN3-232, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-232ENST00000555381 IGHV3OR16-9A0A0B4J2B5 98 aa2.74□□□□□ -1.97
ATXN3-232ENST00000555381 TRBV30A0A0K0K1B3 111 aa2.74□□□□□ -1.97
ATXN3-232ENST00000555381 TRBV27A0A0K0K1C4 114 aa2.74□□□□□ -1.97
ATXN3-232ENST00000555381 RAB19A4D1S5 217 aa2.74□□□□□ -1.97
ATXN3-232ENST00000555381 NDUFC2-KCTD14E9PQ53 114 aa2.74□□□□□ -1.97
ATXN3-232ENST00000555381 BCE1O60756 84 aa2.74□□□□□ -1.97
ATXN3-232ENST00000555381 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
ATXN3-232ENST00000555381 GNG4P50150 75 aa2.74□□□□□ -1.97
ATXN3-232ENST00000555381 CCL20P78556 96 aa2.74□□□□□ -1.97
ATXN3-232ENST00000555381 IFITM3Q01628 133 aa2.74□□□□□ -1.97
ATXN3-232ENST00000555381 FAM229BQ4G0N7 80 aa2.74□□□□□ -1.97
ATXN3-232ENST00000555381 KRTAP13-2Q52LG2 175 aa2.74□□□□□ -1.97
ATXN3-232ENST00000555381 C9orf129Q5T035 196 aaKnown RBP2.74□□□□□ -1.97
ATXN3-232ENST00000555381 FP248Q71RG6 208 aaPredicted RBP2.74□□□□□ -1.97
ATXN3-232ENST00000555381 C11orf52Q96A22 123 aa2.74□□□□□ -1.97
ATXN3-232ENST00000555381 KRTAP4-1Q9BYQ7 146 aa2.74□□□□□ -1.97
ATXN3-232ENST00000555381 RNASE7Q9H1E1 156 aaKnown RBP2.74□□□□□ -1.97
ATXN3-232ENST00000555381 NDUFA13Q9P0J0 144 aa2.74□□□□□ -1.97
ATXN3-232ENST00000555381 UBE2D4Q9Y2X8 147 aa2.74□□□□□ -1.97
ATXN3-232ENST00000555381 A0A1B0GV50 99 aa2.73□□□□□ -1.97
ATXN3-232ENST00000555381 UMAD1C9J7I0 102 aa2.73□□□□□ -1.97
ATXN3-232ENST00000555381 FCER1GP30273 86 aa2.73□□□□□ -1.97
ATXN3-232ENST00000555381 KIAA0087Q14695 138 aa2.73□□□□□ -1.97
ATXN3-232ENST00000555381 RNASE13Q5GAN3 156 aaKnown RBP2.73□□□□□ -1.97
ATXN3-232ENST00000555381 LCE3AQ5TA76 89 aa2.73□□□□□ -1.97
ATXN3-232ENST00000555381 SPAG11AQ6PDA7 123 aa2.73□□□□□ -1.97
ATXN3-232ENST00000555381 FAM213BQ8TBF2 198 aa2.73□□□□□ -1.97
ATXN3-232ENST00000555381 PACRGQ96M98 296 aaPredicted RBP2.73□□□□□ -1.97
ATXN3-232ENST00000555381 TIMM21Q9BVV7 248 aa2.73□□□□□ -1.97
ATXN3-232ENST00000555381 FXYD6-FXYD2A0A087WZ82 144 aa2.72□□□□□ -1.97
ATXN3-232ENST00000555381 ZNF727A8MUV8 499 aa2.72□□□□□ -1.97
ATXN3-232ENST00000555381 GIPP09681 153 aaPredicted RBP2.72□□□□□ -1.97
ATXN3-232ENST00000555381 KRTAP13-3Q3SY46 172 aa2.72□□□□□ -1.97
ATXN3-232ENST00000555381 RPS10P5Q9NQ39 176 aa2.72□□□□□ -1.97
ATXN3-232ENST00000555381 MANBALQ9NQG1 85 aa2.72□□□□□ -1.97
ATXN3-232ENST00000555381 TP73-AS1Q9UF72 201 aa2.72□□□□□ -1.97
ATXN3-232ENST00000555381 A0A1B0GVG6 124 aa2.71□□□□□ -1.98
ATXN3-232ENST00000555381 PPP1R17O96001 155 aa2.71□□□□□ -1.98
ATXN3-232ENST00000555381 RAB4AP20338 218 aa2.71□□□□□ -1.98
ATXN3-232ENST00000555381 MT1HP80294 61 aa2.71□□□□□ -1.98
ATXN3-232ENST00000555381 Q6ZUT4 128 aa2.71□□□□□ -1.98
ATXN3-232ENST00000555381 MRPL55Q7Z7F7 128 aaKnown RBP2.71□□□□□ -1.98
ATXN3-232ENST00000555381 FAM218AQ96MZ4 157 aa2.71□□□□□ -1.98
ATXN3-232ENST00000555381 KIR2DL4Q99706 377 aa2.71□□□□□ -1.98
ATXN3-232ENST00000555381 TMEM191AQ9H0A3 160 aa2.71□□□□□ -1.98
ATXN3-232ENST00000555381 MED9Q9NWA0 146 aa2.71□□□□□ -1.98
ATXN3-232ENST00000555381 GNG13Q9P2W3 67 aa2.71□□□□□ -1.98
ATXN3-232ENST00000555381 TRBV20OR9-2A0A075B6H5 130 aa2.7□□□□□ -1.98
ATXN3-232ENST00000555381 TGIF2-C20orf24A0A0A6YYL0 155 aa2.7□□□□□ -1.98
ATXN3-232ENST00000555381 A8MWL6 223 aa2.7□□□□□ -1.98
ATXN3-232ENST00000555381 PDE6DO43924 150 aa2.7□□□□□ -1.98
ATXN3-232ENST00000555381 UBE2AP49459 152 aa2.7□□□□□ -1.98
ATXN3-232ENST00000555381 MRPS36P82909 103 aaKnown RBP2.7□□□□□ -1.98
ATXN3-232ENST00000555381 C2orf82Q6UX34 121 aa2.7□□□□□ -1.98
ATXN3-232ENST00000555381 KRTAP13-1Q8IUC0 172 aa2.7□□□□□ -1.98
ATXN3-232ENST00000555381 OCC1Q8TAD7 63 aa2.7□□□□□ -1.98
ATXN3-232ENST00000555381 FAM104AQ969W3 186 aa2.7□□□□□ -1.98
ATXN3-232ENST00000555381 BORCS7Q96B45 105 aa2.7□□□□□ -1.98
ATXN3-232ENST00000555381 LINC00167Q96N53 147 aa2.7□□□□□ -1.98
ATXN3-232ENST00000555381 XAGE1AQ9HD64 81 aa2.7□□□□□ -1.98
ATXN3-232ENST00000555381 RPL37AP8A6NKH3 93 aa2.69□□□□□ -1.98
ATXN3-232ENST00000555381 TEX46H3BTG2 121 aa2.69□□□□□ -1.98
ATXN3-232ENST00000555381 PPP1R2P9O14990 202 aa2.69□□□□□ -1.98
ATXN3-232ENST00000555381 TCAPO15273 167 aa2.69□□□□□ -1.98
ATXN3-232ENST00000555381 ARPC5O15511 151 aa2.69□□□□□ -1.98
ATXN3-232ENST00000555381 GATCO43716 136 aaKnown RBP2.69□□□□□ -1.98
ATXN3-232ENST00000555381 CKS1BP61024 79 aa2.69□□□□□ -1.98
ATXN3-232ENST00000555381 HBBP68871 147 aa2.69□□□□□ -1.98
ATXN3-232ENST00000555381 LINC01561Q8N1V8 128 aa2.69□□□□□ -1.98
ATXN3-232ENST00000555381 LINC00469Q8N7U9 141 aa2.69□□□□□ -1.98
ATXN3-232ENST00000555381 Q8NBF4 154 aa2.69□□□□□ -1.98
ATXN3-232ENST00000555381 SPANXA1Q9NS26 97 aa2.69□□□□□ -1.98
ATXN3-232ENST00000555381 A0A1B0GUT8 65 aa2.68□□□□□ -1.98
ATXN3-232ENST00000555381 SMKR1H3BMG3 65 aa2.68□□□□□ -1.98
ATXN3-232ENST00000555381 K7EN84 100 aa2.68□□□□□ -1.98
ATXN3-232ENST00000555381 RPL39P62891 51 aaKnown RBP2.68□□□□□ -1.98
ATXN3-232ENST00000555381 RPL32P62910 135 aaKnown RBP2.68□□□□□ -1.98
ATXN3-232ENST00000555381 KRTAP19-2Q3LHN2 52 aa2.68□□□□□ -1.98
ATXN3-232ENST00000555381 C6orf226Q5I0X4 101 aa2.68□□□□□ -1.98
ATXN3-232ENST00000555381 FAM231DQ6ZW35 169 aa2.68□□□□□ -1.98
ATXN3-232ENST00000555381 AMN1Q8IY45 258 aa2.68□□□□□ -1.98
ATXN3-232ENST00000555381 Q8N377 158 aa2.68□□□□□ -1.98
ATXN3-232ENST00000555381 DAND5Q8N907 189 aa2.68□□□□□ -1.98
ATXN3-232ENST00000555381 C20orf78Q9BR46 151 aa2.68□□□□□ -1.98
ATXN3-232ENST00000555381 LINC00862A6NCI5 91 aa2.67□□□□□ -1.98
ATXN3-232ENST00000555381 SPINK1P00995 79 aa2.67□□□□□ -1.98
ATXN3-232ENST00000555381 Q6ZN92 141 aa2.67□□□□□ -1.98
ATXN3-232ENST00000555381 C3orf22Q8N5N4 141 aa2.67□□□□□ -1.98
ATXN3-232ENST00000555381 PLEKHB2Q96CS7 222 aa2.67□□□□□ -1.98
ATXN3-232ENST00000555381 GNB1LQ9BYB4 327 aa2.67□□□□□ -1.98
ATXN3-232ENST00000555381 NDUFA12Q9UI09 145 aa2.67□□□□□ -1.98
ATXN3-232ENST00000555381 TRBV24-1A0A075B6N3 115 aa2.66□□□□□ -1.98
ATXN3-232ENST00000555381 KANTRA0A1W2PQU2 76 aa2.66□□□□□ -1.98
ATXN3-232ENST00000555381 HIGD1CA8MV81 97 aa2.66□□□□□ -1.98
ATXN3-232ENST00000555381 M0R2T5 61 aa2.66□□□□□ -1.98
ATXN3-232ENST00000555381 TAGLN2P37802 199 aaKnown RBP2.66□□□□□ -1.98
ATXN3-232ENST00000555381 IFI27P40305 119 aaPredicted RBP2.66□□□□□ -1.98
ATXN3-232ENST00000555381 RIGQ13278 110 aa2.66□□□□□ -1.98
ATXN3-232ENST00000555381 ZNF345Q14585 488 aa2.66□□□□□ -1.98
ATXN3-232ENST00000555381 Q8IZM0 81 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms