RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 Q8IZM0 81 aa7.62□□□□□ -1.19
XRCC3-212ENST00000555231 TP73-AS1Q9UF72 201 aa7.62□□□□□ -1.19
XRCC3-212ENST00000555231 GAGE10A6NGK3 116 aa7.61□□□□□ -1.19
XRCC3-212ENST00000555231 C2orf66Q6UXQ4 117 aa7.61□□□□□ -1.19
XRCC3-212ENST00000555231 LINC00304Q8N9R0 145 aa7.61□□□□□ -1.19
XRCC3-212ENST00000555231 AMELXQ99217 191 aa7.61□□□□□ -1.19
XRCC3-212ENST00000555231 VCX2Q9H322 139 aa7.61□□□□□ -1.19
XRCC3-212ENST00000555231 IGLV7-46A0A075B6I9 117 aa7.6□□□□□ -1.19
XRCC3-212ENST00000555231 CYSLTR1Q9Y271 337 aa7.6□□□□□ -1.19
XRCC3-212ENST00000555231 F8VRH5 84 aa7.59□□□□□ -1.19
XRCC3-212ENST00000555231 SRSF3P84103 164 aaKnown RBP7.59□□□□□ -1.19
XRCC3-212ENST00000555231 TPRXLQ17RH7 258 aa7.59□□□□□ -1.19
XRCC3-212ENST00000555231 AKAP14Q86UN6 197 aa7.59□□□□□ -1.19
XRCC3-212ENST00000555231 CDKN2A-AS1Q9UH64 79 aa7.59□□□□□ -1.19
XRCC3-212ENST00000555231 UBE2AP49459 152 aa7.58□□□□□ -1.2
XRCC3-212ENST00000555231 KRTAP13-1Q8IUC0 172 aa7.58□□□□□ -1.2
XRCC3-212ENST00000555231 MAP1LC3AQ9H492 121 aa7.58□□□□□ -1.2
XRCC3-212ENST00000555231 PRSS47A8MTI9 375 aa7.57□□□□□ -1.2
XRCC3-212ENST00000555231 FAM19A3Q7Z5A8 133 aa7.57□□□□□ -1.2
XRCC3-212ENST00000555231 Q8N8P6 123 aa7.57□□□□□ -1.2
XRCC3-212ENST00000555231 IGKV2D-26A0A0A0MRZ7 120 aa7.56□□□□□ -1.2
XRCC3-212ENST00000555231 IGIPA6NJ69 53 aa7.56□□□□□ -1.2
XRCC3-212ENST00000555231 SCO1O75880 301 aa7.56□□□□□ -1.2
XRCC3-212ENST00000555231 HERVK_113P63121 156 aa7.56□□□□□ -1.2
XRCC3-212ENST00000555231 FAM229BQ4G0N7 80 aa7.56□□□□□ -1.2
XRCC3-212ENST00000555231 hCG_2014768A0A024R1R8 64 aa7.55□□□□□ -1.2
XRCC3-212ENST00000555231 RAB5BP61020 215 aa7.55□□□□□ -1.2
XRCC3-212ENST00000555231 PNRC1Q12796 327 aaPredicted RBP7.55□□□□□ -1.2
XRCC3-212ENST00000555231 ATP5L2Q7Z4Y8 100 aa7.55□□□□□ -1.2
XRCC3-212ENST00000555231 GEMIN7Q9H840 131 aaKnown RBP7.55□□□□□ -1.2
XRCC3-212ENST00000555231 IGKV2-28A0A075B6P5 120 aa7.54□□□□□ -1.2
XRCC3-212ENST00000555231 IGKV2D-28P01615 120 aa7.54□□□□□ -1.2
XRCC3-212ENST00000555231 CXCL5P42830 114 aa7.54□□□□□ -1.2
XRCC3-212ENST00000555231 PRLHP81277 87 aa7.54□□□□□ -1.2
XRCC3-212ENST00000555231 ORMDL2Q53FV1 153 aa7.54□□□□□ -1.2
XRCC3-212ENST00000555231 NKAPP1Q8N9T2 125 aa7.54□□□□□ -1.2
XRCC3-212ENST00000555231 PPDPFQ9H3Y8 114 aa7.54□□□□□ -1.2
XRCC3-212ENST00000555231 LAMTOR2Q9Y2Q5 125 aa7.54□□□□□ -1.2
XRCC3-212ENST00000555231 SEC11AP67812 179 aa7.53□□□□□ -1.2
XRCC3-212ENST00000555231 PEA15Q15121 130 aa7.53□□□□□ -1.2
XRCC3-212ENST00000555231 LCE2DQ5TA82 110 aaPredicted RBP7.53□□□□□ -1.2
XRCC3-212ENST00000555231 COX7B2Q8TF08 81 aa7.53□□□□□ -1.2
XRCC3-212ENST00000555231 IGLV5-37A0A075B6J1 123 aa7.52□□□□□ -1.21
XRCC3-212ENST00000555231 SMIM1B2RUZ4 78 aa7.52□□□□□ -1.21
XRCC3-212ENST00000555231 NPSP0C0P6 89 aa7.52□□□□□ -1.21
XRCC3-212ENST00000555231 C3orf22Q8N5N4 141 aa7.52□□□□□ -1.21
XRCC3-212ENST00000555231 FAM19A1Q7Z5A9 133 aa7.51□□□□□ -1.21
XRCC3-212ENST00000555231 PDZD11Q5EBL8 140 aa7.5□□□□□ -1.21
XRCC3-212ENST00000555231 PAPPA-AS1Q5QFB9 102 aa7.5□□□□□ -1.21
XRCC3-212ENST00000555231 TMEM238C9JI98 176 aa7.49□□□□□ -1.21
XRCC3-212ENST00000555231 SPINK8P0C7L1 97 aa7.49□□□□□ -1.21
XRCC3-212ENST00000555231 TIMM17AQ99595 171 aa7.49□□□□□ -1.21
XRCC3-212ENST00000555231 K7EMI3 77 aa7.48□□□□□ -1.21
XRCC3-212ENST00000555231 TOMM6Q96B49 74 aa7.48□□□□□ -1.21
XRCC3-212ENST00000555231 NXT2Q9NPJ8 142 aaKnown RBP7.48□□□□□ -1.21
XRCC3-212ENST00000555231 ADCYAP1P18509 176 aa7.47□□□□□ -1.21
XRCC3-212ENST00000555231 TMEM126AQ9H061 195 aa7.47□□□□□ -1.21
XRCC3-212ENST00000555231 TINCRA0A1B0GVN0 87 aa7.46□□□□□ -1.22
XRCC3-212ENST00000555231 PFN2P35080 140 aa7.46□□□□□ -1.22
XRCC3-212ENST00000555231 LINC01547P58512 204 aaPredicted RBP7.46□□□□□ -1.22
XRCC3-212ENST00000555231 CTAG1AP78358 180 aa7.46□□□□□ -1.22
XRCC3-212ENST00000555231 PLEKHB2Q96CS7 222 aa7.46□□□□□ -1.22
XRCC3-212ENST00000555231 SCGB3A1Q96QR1 104 aa7.46□□□□□ -1.22
XRCC3-212ENST00000555231 IGLV5-45A0A087WSX0 123 aa7.45□□□□□ -1.22
XRCC3-212ENST00000555231 VPREB1P12018 145 aa7.45□□□□□ -1.22
XRCC3-212ENST00000555231 ERASQ7Z444 233 aa7.45□□□□□ -1.22
XRCC3-212ENST00000555231 LINC00337Q8N6G1 96 aa7.45□□□□□ -1.22
XRCC3-212ENST00000555231 KRTAP4-1Q9BYQ7 146 aa7.45□□□□□ -1.22
XRCC3-212ENST00000555231 M0R378 163 aa7.44□□□□□ -1.22
XRCC3-212ENST00000555231 G0S2P27469 103 aa7.44□□□□□ -1.22
XRCC3-212ENST00000555231 KIAA1644Q3SXP7 199 aa7.44□□□□□ -1.22
XRCC3-212ENST00000555231 CBLN2Q8IUK8 224 aa7.44□□□□□ -1.22
XRCC3-212ENST00000555231 HIGD2AQ9BW72 106 aa7.44□□□□□ -1.22
XRCC3-212ENST00000555231 ATP5LO75964 103 aa7.43□□□□□ -1.22
XRCC3-212ENST00000555231 KRTAP13-3Q3SY46 172 aa7.43□□□□□ -1.22
XRCC3-212ENST00000555231 SPAG11AQ6PDA7 123 aa7.43□□□□□ -1.22
XRCC3-212ENST00000555231 ASB16-AS1Q495Z4 193 aa7.42□□□□□ -1.22
XRCC3-212ENST00000555231 FP248Q71RG6 208 aaPredicted RBP7.42□□□□□ -1.22
XRCC3-212ENST00000555231 DAND5Q8N907 189 aa7.42□□□□□ -1.22
XRCC3-212ENST00000555231 Q8NDZ9 215 aa7.42□□□□□ -1.22
XRCC3-212ENST00000555231 CST9LQ9H4G1 147 aa7.42□□□□□ -1.22
XRCC3-212ENST00000555231 SND1-IT1Q9HBX3 110 aa7.42□□□□□ -1.22
XRCC3-212ENST00000555231 CRCT1Q9UGL9 99 aa7.42□□□□□ -1.22
XRCC3-212ENST00000555231 MT-ND4LP03901 98 aa7.41□□□□□ -1.22
XRCC3-212ENST00000555231 RAB14P61106 215 aa7.41□□□□□ -1.22
XRCC3-212ENST00000555231 C4orf48Q5BLP8 95 aa7.41□□□□□ -1.22
XRCC3-212ENST00000555231 ANAPC16Q96DE5 110 aa7.41□□□□□ -1.22
XRCC3-212ENST00000555231 RPL24P83731 157 aaKnown RBP7.4□□□□□ -1.22
XRCC3-212ENST00000555231 SPRR4Q96PI1 79 aa7.4□□□□□ -1.22
XRCC3-212ENST00000555231 ERG28Q9UKR5 140 aa7.4□□□□□ -1.22
XRCC3-212ENST00000555231 FSIP2Q5CZC0 6907 aa7.39□□□□□ -1.23
XRCC3-212ENST00000555231 H3BRM9 83 aa7.39□□□□□ -1.23
XRCC3-212ENST00000555231 PMVKQ15126 192 aa7.39□□□□□ -1.23
XRCC3-212ENST00000555231 Q8NBF4 154 aa7.39□□□□□ -1.23
XRCC3-212ENST00000555231 ZNF625Q96I27 306 aaPredicted RBP7.39□□□□□ -1.23
XRCC3-212ENST00000555231 GNB1LQ9BYB4 327 aa7.39□□□□□ -1.23
XRCC3-212ENST00000555231 MRPL18Q9H0U6 180 aaKnown RBP7.39□□□□□ -1.23
XRCC3-212ENST00000555231 IGLV5-39A0A0G2JS06 123 aa7.36□□□□□ -1.23
XRCC3-212ENST00000555231 SEC61BP60468 96 aaKnown RBP7.36□□□□□ -1.23
XRCC3-212ENST00000555231 ZNF22P17026 224 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms