RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	TRBV20OR9-2	A0A075B6H5	130 aa		3.02	□□□□□ -1.93
PSMC6-208	ENST00000554956	IGHV3-64	A0A075B6Q5	118 aa		3.02	□□□□□ -1.93
PSMC6-208	ENST00000554956		A0A096LNI7	61 aa		3.02	□□□□□ -1.93
PSMC6-208	ENST00000554956	IGHV6-1	A0A0B4J1U7	121 aa		3.02	□□□□□ -1.93
PSMC6-208	ENST00000554956	TRAV26-2	A0A0B4J265	109 aa		3.02	□□□□□ -1.93
PSMC6-208	ENST00000554956	IGKV2-24	A0A0C4DH68	120 aa		3.02	□□□□□ -1.93
PSMC6-208	ENST00000554956	IGKV3OR2-268	A0A0C4DH90	116 aa		3.02	□□□□□ -1.93
PSMC6-208	ENST00000554956		A0A0U1RQV1	116 aa		3.02	□□□□□ -1.93
PSMC6-208	ENST00000554956	C19orf71	A6NCJ1	209 aa		3.02	□□□□□ -1.93
PSMC6-208	ENST00000554956	LYZL1	Q6UWQ5	148 aa		3.02	□□□□□ -1.93
PSMC6-208	ENST00000554956	KCNRG	Q8N5I3	272 aa		3.02	□□□□□ -1.93
PSMC6-208	ENST00000554956	FER1L6-AS1	Q8NA97	138 aa		3.02	□□□□□ -1.93
PSMC6-208	ENST00000554956	OR2D3	Q8NGH3	330 aa		3.02	□□□□□ -1.93
PSMC6-208	ENST00000554956	AP1S3	Q96PC3	154 aa		3.02	□□□□□ -1.93
PSMC6-208	ENST00000554956	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	3.01	□□□□□ -1.93
PSMC6-208	ENST00000554956		A0A096LNJ9	63 aa		3.01	□□□□□ -1.93
PSMC6-208	ENST00000554956	IGKV2-29	A2NJV5	120 aa	Predicted RBP	3.01	□□□□□ -1.93
PSMC6-208	ENST00000554956	SMIM17	P0DL12	118 aa		3.01	□□□□□ -1.93
PSMC6-208	ENST00000554956	NTF3	P20783	257 aa		3.01	□□□□□ -1.93
PSMC6-208	ENST00000554956	PKIA	P61925	76 aa		3.01	□□□□□ -1.93
PSMC6-208	ENST00000554956	TMEM97	Q5BJF2	176 aa		3.01	□□□□□ -1.93
PSMC6-208	ENST00000554956	CENPW	Q5EE01	88 aa		3.01	□□□□□ -1.93
PSMC6-208	ENST00000554956	RASL11A	Q6T310	242 aa		3.01	□□□□□ -1.93
PSMC6-208	ENST00000554956	LINC01551	Q86U37	167 aa		3.01	□□□□□ -1.93
PSMC6-208	ENST00000554956	GATD1	Q8NB37	220 aa		3.01	□□□□□ -1.93
PSMC6-208	ENST00000554956	RPL39L	Q96EH5	51 aa	Known RBP	3.01	□□□□□ -1.93
PSMC6-208	ENST00000554956	NIT2	Q9NQR4	276 aa		3.01	□□□□□ -1.93
PSMC6-208	ENST00000554956	GVQW2	A0A096LPI5	108 aa	Predicted RBP	3	□□□□□ -1.93
PSMC6-208	ENST00000554956	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	3	□□□□□ -1.93
PSMC6-208	ENST00000554956	APCS	P02743	223 aa		3	□□□□□ -1.93
PSMC6-208	ENST00000554956	SULT1A2	P50226	295 aa		3	□□□□□ -1.93
PSMC6-208	ENST00000554956	C9orf62	Q8N4C0	152 aa		3	□□□□□ -1.93
PSMC6-208	ENST00000554956	C8orf17	Q9NRJ1	99 aa		3	□□□□□ -1.93
PSMC6-208	ENST00000554956	GNG13	Q9P2W3	67 aa		3	□□□□□ -1.93
PSMC6-208	ENST00000554956	TRAV1-1	A0A0B4J248	108 aa		2.99	□□□□□ -1.93
PSMC6-208	ENST00000554956		A0A1W2PNN7	141 aa		2.99	□□□□□ -1.93
PSMC6-208	ENST00000554956	UMAD1	C9J7I0	102 aa		2.99	□□□□□ -1.93
PSMC6-208	ENST00000554956	BPY2	O14599	106 aa		2.99	□□□□□ -1.93
PSMC6-208	ENST00000554956	PFDN1	O60925	122 aa		2.99	□□□□□ -1.93
PSMC6-208	ENST00000554956	FGF6	P10767	208 aa		2.99	□□□□□ -1.93
PSMC6-208	ENST00000554956	ZNF345	Q14585	488 aa		2.99	□□□□□ -1.93
PSMC6-208	ENST00000554956	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	2.99	□□□□□ -1.93
PSMC6-208	ENST00000554956	CNFN	Q9BYD5	112 aa		2.99	□□□□□ -1.93
PSMC6-208	ENST00000554956	DPH3P1	Q9H4G8	78 aa		2.99	□□□□□ -1.93
PSMC6-208	ENST00000554956	CBY1	Q9Y3M2	126 aa		2.99	□□□□□ -1.93
PSMC6-208	ENST00000554956	LPA	P08519	4548 aa		2.98	□□□□□ -1.93
PSMC6-208	ENST00000554956	IGLV4-69	A0A075B6H9	119 aa		2.98	□□□□□ -1.93
PSMC6-208	ENST00000554956		A0A1B0GXF2	115 aa		2.98	□□□□□ -1.93
PSMC6-208	ENST00000554956	HMSD	A8MTL9	139 aa		2.98	□□□□□ -1.93
PSMC6-208	ENST00000554956		F2Z2F3	143 aa		2.98	□□□□□ -1.93
PSMC6-208	ENST00000554956	IFNA1	P01562	189 aa		2.98	□□□□□ -1.93
PSMC6-208	ENST00000554956	ESD	P10768	282 aa		2.98	□□□□□ -1.93
PSMC6-208	ENST00000554956	XCL1	P47992	114 aa		2.98	□□□□□ -1.93
PSMC6-208	ENST00000554956	GNG4	P50150	75 aa		2.98	□□□□□ -1.93
PSMC6-208	ENST00000554956	RPS20	P60866	119 aa	Known RBP	2.98	□□□□□ -1.93
PSMC6-208	ENST00000554956	SYCN	Q0VAF6	134 aa		2.98	□□□□□ -1.93
PSMC6-208	ENST00000554956	LINC00337	Q8N6G1	96 aa		2.98	□□□□□ -1.93
PSMC6-208	ENST00000554956	RNASE7	Q9H1E1	156 aa	Known RBP	2.98	□□□□□ -1.93
PSMC6-208	ENST00000554956	LINC00959	A0A1B0GUT2	108 aa		2.97	□□□□□ -1.93
PSMC6-208	ENST00000554956	SDHAF1	A6NFY7	115 aa		2.97	□□□□□ -1.93
PSMC6-208	ENST00000554956	UBE2L6	O14933	153 aa		2.97	□□□□□ -1.93
PSMC6-208	ENST00000554956	CCL25	O15444	150 aa		2.97	□□□□□ -1.93
PSMC6-208	ENST00000554956	TRGC1	P0CF51	173 aa		2.97	□□□□□ -1.93
PSMC6-208	ENST00000554956	RNASE13	Q5GAN3	156 aa	Known RBP	2.97	□□□□□ -1.93
PSMC6-208	ENST00000554956	SPINK6	Q6UWN8	80 aa		2.97	□□□□□ -1.93
PSMC6-208	ENST00000554956	MANBAL	Q9NQG1	85 aa		2.97	□□□□□ -1.93
PSMC6-208	ENST00000554956	BATF3	Q9NR55	127 aa		2.97	□□□□□ -1.93
PSMC6-208	ENST00000554956	MED9	Q9NWA0	146 aa		2.97	□□□□□ -1.93
PSMC6-208	ENST00000554956	LOC389332	A0A1B0GUA5	103 aa		2.96	□□□□□ -1.94
PSMC6-208	ENST00000554956	KANTR	A0A1W2PQU2	76 aa		2.96	□□□□□ -1.94
PSMC6-208	ENST00000554956	TMEM223	A0PJW6	202 aa		2.96	□□□□□ -1.94
PSMC6-208	ENST00000554956	BCL2	P10415	239 aa		2.96	□□□□□ -1.94
PSMC6-208	ENST00000554956	MEF2B	Q02080	365 aa	Predicted RBP	2.96	□□□□□ -1.94
PSMC6-208	ENST00000554956	RGS21	Q2M5E4	152 aa		2.96	□□□□□ -1.94
PSMC6-208	ENST00000554956	DEFB116	Q30KQ4	102 aa		2.96	□□□□□ -1.94
PSMC6-208	ENST00000554956	AMMECR1L	Q6DCA0	310 aa		2.96	□□□□□ -1.94
PSMC6-208	ENST00000554956	OR5A1	Q8NGJ0	315 aa		2.96	□□□□□ -1.94
PSMC6-208	ENST00000554956	ORAOV1	Q8WV07	137 aa		2.96	□□□□□ -1.94
PSMC6-208	ENST00000554956	SMIM12	Q96EX1	92 aa		2.96	□□□□□ -1.94
PSMC6-208	ENST00000554956	CARD19	Q96LW7	228 aa		2.96	□□□□□ -1.94
PSMC6-208	ENST00000554956	CDC42SE2	Q9NRR3	84 aa		2.96	□□□□□ -1.94
PSMC6-208	ENST00000554956	TMEM242	Q9NWH2	141 aa		2.96	□□□□□ -1.94
PSMC6-208	ENST00000554956	IGHV1-58	A0A0C4DH39	117 aa		2.95	□□□□□ -1.94
PSMC6-208	ENST00000554956	TRBV6-5	A0A0K0K1A5	114 aa		2.95	□□□□□ -1.94
PSMC6-208	ENST00000554956	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	2.95	□□□□□ -1.94
PSMC6-208	ENST00000554956		I3L3M4	83 aa		2.95	□□□□□ -1.94
PSMC6-208	ENST00000554956	PDE6D	O43924	150 aa		2.95	□□□□□ -1.94
PSMC6-208	ENST00000554956	NCR2	O95944	276 aa		2.95	□□□□□ -1.94
PSMC6-208	ENST00000554956	POLR2K	P53803	58 aa	Known RBP	2.95	□□□□□ -1.94
PSMC6-208	ENST00000554956	CTAG1A	P78358	180 aa		2.95	□□□□□ -1.94
PSMC6-208	ENST00000554956	C9orf116	Q5BN46	136 aa	Predicted RBP	2.95	□□□□□ -1.94
PSMC6-208	ENST00000554956	FAM231D	Q6ZW35	169 aa		2.95	□□□□□ -1.94
PSMC6-208	ENST00000554956	PHF5A	Q7RTV0	110 aa	Known RBP	2.95	□□□□□ -1.94
PSMC6-208	ENST00000554956	RBM12B-AS1	Q9P1G2	102 aa		2.95	□□□□□ -1.94
PSMC6-208	ENST00000554956	PSORS1C2	Q9UIG4	136 aa		2.95	□□□□□ -1.94
PSMC6-208	ENST00000554956	SCO1	O75880	301 aa		2.94	□□□□□ -1.94
PSMC6-208	ENST00000554956	ZNF25	P17030	456 aa	Predicted RBP	2.94	□□□□□ -1.94
PSMC6-208	ENST00000554956	C5orf38	Q86SI9	138 aa		2.94	□□□□□ -1.94
PSMC6-208	ENST00000554956	AMN1	Q8IY45	258 aa		2.94	□□□□□ -1.94
PSMC6-208	ENST00000554956	ZNF664	Q8N3J9	261 aa		2.94	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms