RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 KIAA0087Q14695 138 aa9.49□□□□□ -0.89
SHOX2-206ENST00000554685 SLC25A34Q6PIV7 304 aa9.49□□□□□ -0.89
SHOX2-206ENST00000554685 C2orf48Q96LS8 159 aa9.49□□□□□ -0.89
SHOX2-206ENST00000554685 DNAH1Q9P2D7 4330 aa9.49□□□□□ -0.89
SHOX2-206ENST00000554685 TSTD3H0UI37 97 aa9.48□□□□□ -0.89
SHOX2-206ENST00000554685 HIGD2BQ4VC39 106 aa9.48□□□□□ -0.89
SHOX2-206ENST00000554685 PCP2Q8IVA1 136 aa9.48□□□□□ -0.89
SHOX2-206ENST00000554685 C14orf144Q96I85 54 aa9.48□□□□□ -0.89
SHOX2-206ENST00000554685 LINC00587B1AMM8 73 aa9.47□□□□□ -0.89
SHOX2-206ENST00000554685 BOD1L2Q8IYS8 172 aa9.47□□□□□ -0.89
SHOX2-206ENST00000554685 NTN5Q8WTR8 489 aaPredicted RBP9.47□□□□□ -0.89
SHOX2-206ENST00000554685 ZNF625Q96I27 306 aaPredicted RBP9.47□□□□□ -0.89
SHOX2-206ENST00000554685 UQCR10Q9UDW1 63 aa9.47□□□□□ -0.89
SHOX2-206ENST00000554685 SCGB1D4Q6XE38 83 aa9.46□□□□□ -0.9
SHOX2-206ENST00000554685 CAMK2N2Q96S95 79 aa9.46□□□□□ -0.9
SHOX2-206ENST00000554685 DNAH6Q9C0G6 4158 aa9.46□□□□□ -0.9
SHOX2-206ENST00000554685 LRCOL1A6NCL2 159 aa9.45□□□□□ -0.9
SHOX2-206ENST00000554685 EREGO14944 169 aa9.45□□□□□ -0.9
SHOX2-206ENST00000554685 LECT2O14960 151 aa9.45□□□□□ -0.9
SHOX2-206ENST00000554685 TTTY13Q9BZ97 58 aa9.45□□□□□ -0.9
SHOX2-206ENST00000554685 CIRBPQ14011 172 aaKnown RBP9.44□□□□□ -0.9
SHOX2-206ENST00000554685 MIEN1Q9BRT3 115 aa9.44□□□□□ -0.9
SHOX2-206ENST00000554685 PRO1933Q9H354 126 aa9.44□□□□□ -0.9
SHOX2-206ENST00000554685 TRBV30A0A0K0K1B3 111 aa9.43□□□□□ -0.9
SHOX2-206ENST00000554685 SYCNQ0VAF6 134 aa9.43□□□□□ -0.9
SHOX2-206ENST00000554685 MEIG1Q5JSS6 88 aa9.43□□□□□ -0.9
SHOX2-206ENST00000554685 C2orf82Q6UX34 121 aa9.43□□□□□ -0.9
SHOX2-206ENST00000554685 A0A087WTM6 91 aa9.42□□□□□ -0.9
SHOX2-206ENST00000554685 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.42□□□□□ -0.9
SHOX2-206ENST00000554685 A0A0J9YXY3 114 aa9.42□□□□□ -0.9
SHOX2-206ENST00000554685 TIMM17BO60830 172 aa9.42□□□□□ -0.9
SHOX2-206ENST00000554685 WFDC2Q14508 124 aa9.42□□□□□ -0.9
SHOX2-206ENST00000554685 LINC00526Q96FQ7 95 aa9.42□□□□□ -0.9
SHOX2-206ENST00000554685 CARD19Q96LW7 228 aa9.42□□□□□ -0.9
SHOX2-206ENST00000554685 TMEM238C9JI98 176 aa9.41□□□□□ -0.9
SHOX2-206ENST00000554685 RNF151Q2KHN1 245 aa9.41□□□□□ -0.9
SHOX2-206ENST00000554685 UNQ6190/PRO20217Q6UXQ8 127 aa9.41□□□□□ -0.9
SHOX2-206ENST00000554685 HIGD1BQ9P298 99 aa9.41□□□□□ -0.9
SHOX2-206ENST00000554685 GCSHP23434 173 aa9.4□□□□□ -0.9
SHOX2-206ENST00000554685 HNRNPA3P51991 378 aaKnown RBP9.4□□□□□ -0.9
SHOX2-206ENST00000554685 CNBPP62633 177 aaKnown RBP9.4□□□□□ -0.9
SHOX2-206ENST00000554685 COX17Q14061 63 aa9.4□□□□□ -0.9
SHOX2-206ENST00000554685 Q6ZRU5 148 aa9.4□□□□□ -0.9
SHOX2-206ENST00000554685 Q8N814 137 aa9.4□□□□□ -0.9
SHOX2-206ENST00000554685 ERG28Q9UKR5 140 aa9.4□□□□□ -0.9
SHOX2-206ENST00000554685 PKIGQ9Y2B9 76 aa9.4□□□□□ -0.9
SHOX2-206ENST00000554685 RTL8CO15255 209 aa9.39□□□□□ -0.91
SHOX2-206ENST00000554685 C10orf25Q5T742 122 aa9.39□□□□□ -0.91
SHOX2-206ENST00000554685 LINC00336Q6ZUF6 198 aa9.38□□□□□ -0.91
SHOX2-206ENST00000554685 Q6ZVH6 145 aa9.38□□□□□ -0.91
SHOX2-206ENST00000554685 C6orf48Q9UBA6 75 aa9.38□□□□□ -0.91
SHOX2-206ENST00000554685 LINC00158P58513 81 aa9.37□□□□□ -0.91
SHOX2-206ENST00000554685 COPS9Q8WXC6 57 aa9.37□□□□□ -0.91
SHOX2-206ENST00000554685 SPANXB1Q9NS25 103 aaPredicted RBP9.37□□□□□ -0.91
SHOX2-206ENST00000554685 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.36□□□□□ -0.91
SHOX2-206ENST00000554685 SMIM13P0DJ93 91 aa9.36□□□□□ -0.91
SHOX2-206ENST00000554685 PFN2P35080 140 aa9.36□□□□□ -0.91
SHOX2-206ENST00000554685 C2orf91Q6ZV80 131 aa9.36□□□□□ -0.91
SHOX2-206ENST00000554685 SPANXDQ9BXN6 97 aa9.36□□□□□ -0.91
SHOX2-206ENST00000554685 SPANXCQ9NY87 97 aa9.36□□□□□ -0.91
SHOX2-206ENST00000554685 TP73-AS1Q9UF72 201 aa9.36□□□□□ -0.91
SHOX2-206ENST00000554685 KMT2AQ03164 3969 aa9.36□□□□□ -0.91
SHOX2-206ENST00000554685 SLPIP03973 132 aa9.35□□□□□ -0.91
SHOX2-206ENST00000554685 SRSF9Q13242 221 aaKnown RBP eCLIP9.35□□□□□ -0.91
SHOX2-206ENST00000554685 TAL2Q16559 108 aa9.35□□□□□ -0.91
SHOX2-206ENST00000554685 NDUFC2-KCTD14E9PQ53 114 aa9.34□□□□□ -0.91
SHOX2-206ENST00000554685 TLX1NBP0CAT3 122 aa9.34□□□□□ -0.91
SHOX2-206ENST00000554685 IFITM1P13164 125 aa9.34□□□□□ -0.91
SHOX2-206ENST00000554685 DDTP30046 118 aa9.34□□□□□ -0.91
SHOX2-206ENST00000554685 HIST1H4GQ99525 98 aa9.34□□□□□ -0.91
SHOX2-206ENST00000554685 LITAFQ99732 161 aa9.34□□□□□ -0.91
SHOX2-206ENST00000554685 A0A0U1RRA0 63 aa9.33□□□□□ -0.92
SHOX2-206ENST00000554685 LOC107984640A0A0U1RRK4 108 aa9.33□□□□□ -0.92
SHOX2-206ENST00000554685 HSD52Q0P140 79 aa9.33□□□□□ -0.92
SHOX2-206ENST00000554685 C9orf116Q5BN46 136 aaPredicted RBP9.33□□□□□ -0.92
SHOX2-206ENST00000554685 MIR7-3HGQ8N6C7 128 aa9.33□□□□□ -0.92
SHOX2-206ENST00000554685 C9orf163Q8N9P6 203 aa9.32□□□□□ -0.92
SHOX2-206ENST00000554685 PPDPFQ9H3Y8 114 aa9.32□□□□□ -0.92
SHOX2-206ENST00000554685 SACSQ9NZJ4 4579 aa9.31□□□□□ -0.92
SHOX2-206ENST00000554685 PTTG1IPP53801 180 aa9.31□□□□□ -0.92
SHOX2-206ENST00000554685 ADAMTSL4-AS1Q5T5F5 129 aa9.31□□□□□ -0.92
SHOX2-206ENST00000554685 HYDINQ4G0P3 5121 aa9.3□□□□□ -0.92
SHOX2-206ENST00000554685 IGLV5-52A0A0A0MRZ9 124 aa9.3□□□□□ -0.92
SHOX2-206ENST00000554685 GHRHP01286 108 aa9.3□□□□□ -0.92
SHOX2-206ENST00000554685 RPL18AQ02543 176 aaKnown RBP9.3□□□□□ -0.92
SHOX2-206ENST00000554685 M0R143 59 aa9.29□□□□□ -0.92
SHOX2-206ENST00000554685 CTAG1AP78358 180 aa9.29□□□□□ -0.92
SHOX2-206ENST00000554685 RPL24P83731 157 aaKnown RBP9.29□□□□□ -0.92
SHOX2-206ENST00000554685 DAND5Q8N907 189 aa9.29□□□□□ -0.92
SHOX2-206ENST00000554685 DNAH10Q8IVF4 4471 aa9.28□□□□□ -0.92
SHOX2-206ENST00000554685 TMEM238LA0A1B0GVL6 79 aa9.28□□□□□ -0.92
SHOX2-206ENST00000554685 PCP4L1A6NKN8 68 aa9.28□□□□□ -0.92
SHOX2-206ENST00000554685 CEND1Q8N111 149 aa9.28□□□□□ -0.92
SHOX2-206ENST00000554685 LINC00308Q8TCZ7 52 aa9.28□□□□□ -0.92
SHOX2-206ENST00000554685 SND1-IT1Q9HBX3 110 aa9.28□□□□□ -0.92
SHOX2-206ENST00000554685 RYR2Q92736 4967 aa9.27□□□□□ -0.93
SHOX2-206ENST00000554685 LOC107984156A0A0G2JMH3 177 aa9.27□□□□□ -0.93
SHOX2-206ENST00000554685 Q6ZRP5 223 aa9.27□□□□□ -0.93
SHOX2-206ENST00000554685 MUSTN1Q8IVN3 82 aa9.27□□□□□ -0.93
SHOX2-206ENST00000554685 ARL17AQ8IVW1 177 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms