RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 ESRGQ1W209 222 aa3.75□□□□□ -1.81
ATXN3-226ENST00000554350 RRN3P1Q2M238 152 aa3.75□□□□□ -1.81
ATXN3-226ENST00000554350 ZNF876PQ49A33 203 aa3.75□□□□□ -1.81
ATXN3-226ENST00000554350 UFSP1Q6NVU6 142 aa3.75□□□□□ -1.81
ATXN3-226ENST00000554350 SCXQ7RTU7 201 aa3.75□□□□□ -1.81
ATXN3-226ENST00000554350 RPL39LQ96EH5 51 aaKnown RBP3.75□□□□□ -1.81
ATXN3-226ENST00000554350 TRAV8-6A0A0B4J262 113 aa3.74□□□□□ -1.81
ATXN3-226ENST00000554350 K7EP34 96 aa3.74□□□□□ -1.81
ATXN3-226ENST00000554350 ZNF415Q09FC8 603 aa3.74□□□□□ -1.81
ATXN3-226ENST00000554350 SPINK13Q1W4C9 94 aa3.74□□□□□ -1.81
ATXN3-226ENST00000554350 AMMECR1LQ6DCA0 310 aa3.74□□□□□ -1.81
ATXN3-226ENST00000554350 C20orf203Q8NBC4 194 aa3.74□□□□□ -1.81
ATXN3-226ENST00000554350 CST9LQ9H4G1 147 aa3.74□□□□□ -1.81
ATXN3-226ENST00000554350 SPANXB1Q9NS25 103 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-226ENST00000554350 TP73-AS1Q9UF72 201 aa3.74□□□□□ -1.81
ATXN3-226ENST00000554350 FAT3Q8TDW7 4589 aa3.73□□□□□ -1.81
ATXN3-226ENST00000554350 IGLV4-69A0A075B6H9 119 aa3.73□□□□□ -1.81
ATXN3-226ENST00000554350 TRBV7-3A0A075B6L6 115 aa3.73□□□□□ -1.81
ATXN3-226ENST00000554350 TRAV26-1A0A087WT03 109 aa3.73□□□□□ -1.81
ATXN3-226ENST00000554350 A0A1W2PPM0 123 aa3.73□□□□□ -1.81
ATXN3-226ENST00000554350 TSHBP01222 138 aa3.73□□□□□ -1.81
ATXN3-226ENST00000554350 FABP2P12104 132 aa3.73□□□□□ -1.81
ATXN3-226ENST00000554350 PRADC1Q9BSG0 188 aa3.73□□□□□ -1.81
ATXN3-226ENST00000554350 TNXBP22105 4242 aa3.72□□□□□ -1.81
ATXN3-226ENST00000554350 IGLV5-37A0A075B6J1 123 aa3.72□□□□□ -1.81
ATXN3-226ENST00000554350 TRAV12-2A0A075B6T6 113 aa3.72□□□□□ -1.81
ATXN3-226ENST00000554350 TRBV10-1A0A0K0K1A3 114 aa3.72□□□□□ -1.81
ATXN3-226ENST00000554350 LYRM9A8MSI8 78 aa3.72□□□□□ -1.81
ATXN3-226ENST00000554350 H3BUT2 72 aa3.72□□□□□ -1.81
ATXN3-226ENST00000554350 K7ERU9 68 aa3.72□□□□□ -1.81
ATXN3-226ENST00000554350 INSP01308 110 aa3.72□□□□□ -1.81
ATXN3-226ENST00000554350 IGHV3-53P01767 116 aa3.72□□□□□ -1.81
ATXN3-226ENST00000554350 FXYD2P54710 66 aa3.72□□□□□ -1.81
ATXN3-226ENST00000554350 SMAGPQ0VAQ4 97 aa3.72□□□□□ -1.81
ATXN3-226ENST00000554350 ZNF56Q15929 161 aa3.72□□□□□ -1.81
ATXN3-226ENST00000554350 Q6ZSA8 131 aa3.72□□□□□ -1.81
ATXN3-226ENST00000554350 Q6ZVH6 145 aa3.72□□□□□ -1.81
ATXN3-226ENST00000554350 Q8N814 137 aa3.72□□□□□ -1.81
ATXN3-226ENST00000554350 C11orf72Q8NBR9 251 aa3.72□□□□□ -1.81
ATXN3-226ENST00000554350 PLEKHB2Q96CS7 222 aa3.72□□□□□ -1.81
ATXN3-226ENST00000554350 AMELXQ99217 191 aa3.72□□□□□ -1.81
ATXN3-226ENST00000554350 HIST1H4GQ99525 98 aa3.72□□□□□ -1.81
ATXN3-226ENST00000554350 TIMM21Q9BVV7 248 aa3.72□□□□□ -1.81
ATXN3-226ENST00000554350 JPT2Q9H910 190 aa3.72□□□□□ -1.81
ATXN3-226ENST00000554350 SPANXA1Q9NS26 97 aa3.72□□□□□ -1.81
ATXN3-226ENST00000554350 TMEM223A0PJW6 202 aa3.71□□□□□ -1.82
ATXN3-226ENST00000554350 ZNF815PA8K554 130 aa3.71□□□□□ -1.82
ATXN3-226ENST00000554350 F8W1H4 67 aa3.71□□□□□ -1.82
ATXN3-226ENST00000554350 LEPROTO15243 131 aa3.71□□□□□ -1.82
ATXN3-226ENST00000554350 UBE2D1P51668 147 aa3.71□□□□□ -1.82
ATXN3-226ENST00000554350 MRPS36P82909 103 aaKnown RBP3.71□□□□□ -1.82
ATXN3-226ENST00000554350 OCIAD2Q56VL3 154 aa3.71□□□□□ -1.82
ATXN3-226ENST00000554350 FAM74A4Q5TZK3 123 aa3.71□□□□□ -1.82
ATXN3-226ENST00000554350 LYRM7Q5U5X0 104 aa3.71□□□□□ -1.82
ATXN3-226ENST00000554350 Q6ZRU5 148 aa3.71□□□□□ -1.82
ATXN3-226ENST00000554350 NEGR1Q7Z3B1 354 aa3.71□□□□□ -1.82
ATXN3-226ENST00000554350 SLC25A29Q8N8R3 303 aa3.71□□□□□ -1.82
ATXN3-226ENST00000554350 VCX2Q9H322 139 aa3.71□□□□□ -1.82
ATXN3-226ENST00000554350 CSDC2Q9Y534 153 aaKnown RBP3.71□□□□□ -1.82
ATXN3-226ENST00000554350 SPCS1Q9Y6A9 102 aa3.71□□□□□ -1.82
ATXN3-226ENST00000554350 IGLV4-3A0A075B6K6 122 aa3.7□□□□□ -1.82
ATXN3-226ENST00000554350 J3QQQ9 107 aa3.7□□□□□ -1.82
ATXN3-226ENST00000554350 RBX1P62877 108 aa3.7□□□□□ -1.82
ATXN3-226ENST00000554350 DAZ2Q13117 558 aaKnown RBP3.7□□□□□ -1.82
ATXN3-226ENST00000554350 LINC01620Q4KN68 170 aa3.7□□□□□ -1.82
ATXN3-226ENST00000554350 CFAP126Q5VTH2 177 aa3.7□□□□□ -1.82
ATXN3-226ENST00000554350 FAM19A3Q7Z5A8 133 aa3.7□□□□□ -1.82
ATXN3-226ENST00000554350 LINC01587Q99440 93 aa3.7□□□□□ -1.82
ATXN3-226ENST00000554350 TTTY13Q9BZ97 58 aa3.7□□□□□ -1.82
ATXN3-226ENST00000554350 PPDPFQ9H3Y8 114 aa3.7□□□□□ -1.82
ATXN3-226ENST00000554350 TRBV20-1A0A075B6N2 111 aa3.69□□□□□ -1.82
ATXN3-226ENST00000554350 TINCRA0A1B0GVN0 87 aa3.69□□□□□ -1.82
ATXN3-226ENST00000554350 LRCOL1A6NCL2 159 aa3.69□□□□□ -1.82
ATXN3-226ENST00000554350 H7C423 109 aa3.69□□□□□ -1.82
ATXN3-226ENST00000554350 PRM2P04554 102 aa3.69□□□□□ -1.82
ATXN3-226ENST00000554350 CFC1BP0CG36 223 aa3.69□□□□□ -1.82
ATXN3-226ENST00000554350 CFC1P0CG37 223 aa3.69□□□□□ -1.82
ATXN3-226ENST00000554350 ZNF22P17026 224 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-226ENST00000554350 LGALS3P17931 250 aaKnown RBP3.69□□□□□ -1.82
ATXN3-226ENST00000554350 RPL39P62891 51 aaKnown RBP3.69□□□□□ -1.82
ATXN3-226ENST00000554350 SRSF9Q13242 221 aaKnown RBP eCLIP3.69□□□□□ -1.82
ATXN3-226ENST00000554350 TMEM170BQ5T4T1 132 aa3.69□□□□□ -1.82
ATXN3-226ENST00000554350 LCE3CQ5T5A8 94 aa3.69□□□□□ -1.82
ATXN3-226ENST00000554350 SCGB1D4Q6XE38 83 aa3.69□□□□□ -1.82
ATXN3-226ENST00000554350 DAZ4Q86SG3 579 aaKnown RBP3.69□□□□□ -1.82
ATXN3-226ENST00000554350 C1orf158Q8N1D5 194 aa3.69□□□□□ -1.82
ATXN3-226ENST00000554350 CIRBP-AS1Q8TBR5 109 aa3.69□□□□□ -1.82
ATXN3-226ENST00000554350 RNASE8Q8TDE3 154 aaKnown RBP3.69□□□□□ -1.82
ATXN3-226ENST00000554350 TMEM263Q8WUH6 116 aaKnown RBP3.69□□□□□ -1.82
ATXN3-226ENST00000554350 DAZ3Q9NR90 486 aaKnown RBP3.69□□□□□ -1.82
ATXN3-226ENST00000554350 NHP2Q9NX24 153 aaKnown RBP3.69□□□□□ -1.82
ATXN3-226ENST00000554350 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-226ENST00000554350 IGLV5-45A0A087WSX0 123 aa3.68□□□□□ -1.82
ATXN3-226ENST00000554350 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-226ENST00000554350 TRAV4A0A0B4J268 109 aa3.68□□□□□ -1.82
ATXN3-226ENST00000554350 IGHV1-58A0A0C4DH39 117 aa3.68□□□□□ -1.82
ATXN3-226ENST00000554350 A0A0J9YXY3 114 aa3.68□□□□□ -1.82
ATXN3-226ENST00000554350 TMEM238C9JI98 176 aa3.68□□□□□ -1.82
ATXN3-226ENST00000554350 J3QR89 54 aa3.68□□□□□ -1.82
ATXN3-226ENST00000554350 M0QXV9 152 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms