RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 BOD1L2Q8IYS8 172 aa4.35□□□□□ -1.71
LINC00517-202ENST00000554257 DLEU1O43261 78 aa4.35□□□□□ -1.71
LINC00517-202ENST00000554257 SCGB1D1O95968 90 aa4.35□□□□□ -1.71
LINC00517-202ENST00000554257 TLX1NBP0CAT3 122 aa4.35□□□□□ -1.71
LINC00517-202ENST00000554257 TMEM170BQ5T4T1 132 aa4.35□□□□□ -1.71
LINC00517-202ENST00000554257 ORAOV1Q8WV07 137 aa4.35□□□□□ -1.71
LINC00517-202ENST00000554257 GEMIN7Q9H840 131 aaKnown RBP4.35□□□□□ -1.71
LINC00517-202ENST00000554257 AKR1D1P51857 326 aa4.34□□□□□ -1.71
LINC00517-202ENST00000554257 CIRBPQ14011 172 aaKnown RBP4.34□□□□□ -1.71
LINC00517-202ENST00000554257 LCE2DQ5TA82 110 aaPredicted RBP4.34□□□□□ -1.71
LINC00517-202ENST00000554257 C2orf82Q6UX34 121 aa4.34□□□□□ -1.71
LINC00517-202ENST00000554257 Q6ZRU5 148 aa4.34□□□□□ -1.71
LINC00517-202ENST00000554257 PLEKHB2Q96CS7 222 aa4.34□□□□□ -1.71
LINC00517-202ENST00000554257 LINC00526Q96FQ7 95 aa4.34□□□□□ -1.71
LINC00517-202ENST00000554257 LOC107984156A0A0G2JMH3 177 aa4.34□□□□□ -1.71
LINC00517-202ENST00000554257 C20orf202A1L168 122 aa4.34□□□□□ -1.71
LINC00517-202ENST00000554257 J3QQQ9 107 aa4.34□□□□□ -1.71
LINC00517-202ENST00000554257 COX8AP10176 69 aa4.34□□□□□ -1.71
LINC00517-202ENST00000554257 ARL17AQ8IVW1 177 aa4.34□□□□□ -1.71
LINC00517-202ENST00000554257 Q8NDZ9 215 aa4.34□□□□□ -1.71
LINC00517-202ENST00000554257 H3BRM9 83 aa4.34□□□□□ -1.72
LINC00517-202ENST00000554257 LECT2O14960 151 aa4.34□□□□□ -1.72
LINC00517-202ENST00000554257 HIGD2BQ4VC39 106 aa4.34□□□□□ -1.72
LINC00517-202ENST00000554257 SPAG11BQ08648 103 aa4.33□□□□□ -1.72
LINC00517-202ENST00000554257 UNQ6190/PRO20217Q6UXQ8 127 aa4.33□□□□□ -1.72
LINC00517-202ENST00000554257 Q6ZSA8 131 aa4.33□□□□□ -1.72
LINC00517-202ENST00000554257 EIF4EBP3O60516 100 aaPredicted RBP4.33□□□□□ -1.72
LINC00517-202ENST00000554257 NMUP48645 174 aa4.33□□□□□ -1.72
LINC00517-202ENST00000554257 PPDPFQ9H3Y8 114 aa4.33□□□□□ -1.72
LINC00517-202ENST00000554257 A0A0J9YXY3 114 aa4.33□□□□□ -1.72
LINC00517-202ENST00000554257 FUSP35637 526 aaKnown RBP eCLIP4.33□□□□□ -1.72
LINC00517-202ENST00000554257 SPATA45Q537H7 98 aa4.33□□□□□ -1.72
LINC00517-202ENST00000554257 TRBV30A0A0K0K1B3 111 aa4.32□□□□□ -1.72
LINC00517-202ENST00000554257 PANO1I0J062 215 aa4.32□□□□□ -1.72
LINC00517-202ENST00000554257 ADAMTSL4-AS1Q5T5F5 129 aa4.32□□□□□ -1.72
LINC00517-202ENST00000554257 LINC00336Q6ZUF6 198 aa4.32□□□□□ -1.72
LINC00517-202ENST00000554257 C9orf163Q8N9P6 203 aa4.32□□□□□ -1.72
LINC00517-202ENST00000554257 CXCL5P42830 114 aa4.32□□□□□ -1.72
LINC00517-202ENST00000554257 C9orf116Q5BN46 136 aaPredicted RBP4.32□□□□□ -1.72
LINC00517-202ENST00000554257 SDIM1Q6ZPB5 146 aa4.32□□□□□ -1.72
LINC00517-202ENST00000554257 MYMXA0A1B0GTQ4 84 aa4.31□□□□□ -1.72
LINC00517-202ENST00000554257 TIMM17BO60830 172 aa4.31□□□□□ -1.72
LINC00517-202ENST00000554257 PAM16Q9Y3D7 125 aa4.31□□□□□ -1.72
LINC00517-202ENST00000554257 APOMO95445 188 aa4.31□□□□□ -1.72
LINC00517-202ENST00000554257 SOSTDC1Q6X4U4 206 aa4.31□□□□□ -1.72
LINC00517-202ENST00000554257 Q6ZRP5 223 aa4.31□□□□□ -1.72
LINC00517-202ENST00000554257 C12orf57Q99622 126 aa4.31□□□□□ -1.72
LINC00517-202ENST00000554257 KRTAP17-1Q9BYP8 105 aa4.31□□□□□ -1.72
LINC00517-202ENST00000554257 BIRC6Q9NR09 4857 aa4.31□□□□□ -1.72
LINC00517-202ENST00000554257 FAT3Q8TDW7 4589 aa4.31□□□□□ -1.72
LINC00517-202ENST00000554257 PTTG1IPP53801 180 aa4.31□□□□□ -1.72
LINC00517-202ENST00000554257 C9orf129Q5T035 196 aaKnown RBP4.31□□□□□ -1.72
LINC00517-202ENST00000554257 CFAP161Q6P656 301 aa4.31□□□□□ -1.72
LINC00517-202ENST00000554257 VAMP8Q9BV40 100 aa4.31□□□□□ -1.72
LINC00517-202ENST00000554257 MALP21145 153 aa4.3□□□□□ -1.72
LINC00517-202ENST00000554257 SPANXDQ9BXN6 97 aa4.3□□□□□ -1.72
LINC00517-202ENST00000554257 SPANXB1Q9NS25 103 aaPredicted RBP4.3□□□□□ -1.72
LINC00517-202ENST00000554257 SPANXCQ9NY87 97 aa4.3□□□□□ -1.72
LINC00517-202ENST00000554257 NDUFA12Q9UI09 145 aa4.3□□□□□ -1.72
LINC00517-202ENST00000554257 COX17Q14061 63 aa4.3□□□□□ -1.72
LINC00517-202ENST00000554257 HIGD1BQ9P298 99 aa4.3□□□□□ -1.72
LINC00517-202ENST00000554257 HERVK_113P61574 105 aa4.3□□□□□ -1.72
LINC00517-202ENST00000554257 SYCNQ0VAF6 134 aa4.3□□□□□ -1.72
LINC00517-202ENST00000554257 C14orf177Q52M58 125 aa4.3□□□□□ -1.72
LINC00517-202ENST00000554257 SFTA2Q6UW10 78 aa4.3□□□□□ -1.72
LINC00517-202ENST00000554257 KRTAP10-1P60331 282 aa4.29□□□□□ -1.72
LINC00517-202ENST00000554257 HERV-K104P63124 156 aa4.29□□□□□ -1.72
LINC00517-202ENST00000554257 SPACA4Q8TDM5 124 aa4.29□□□□□ -1.72
LINC00517-202ENST00000554257 CARD19Q96LW7 228 aa4.29□□□□□ -1.72
LINC00517-202ENST00000554257 C14orf144Q96I85 54 aa4.29□□□□□ -1.72
LINC00517-202ENST00000554257 ERG28Q9UKR5 140 aa4.29□□□□□ -1.72
LINC00517-202ENST00000554257 A0A096LNI7 61 aa4.28□□□□□ -1.72
LINC00517-202ENST00000554257 ZNF815PA8K554 130 aa4.28□□□□□ -1.72
LINC00517-202ENST00000554257 PSCAO43653 123 aa4.28□□□□□ -1.72
LINC00517-202ENST00000554257 S100A12P80511 92 aa4.28□□□□□ -1.72
LINC00517-202ENST00000554257 PLA2G2DQ9UNK4 145 aa4.28□□□□□ -1.72
LINC00517-202ENST00000554257 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.28□□□□□ -1.72
LINC00517-202ENST00000554257 IGLV5-37A0A075B6J1 123 aa4.28□□□□□ -1.72
LINC00517-202ENST00000554257 NDUFC2-KCTD14E9PQ53 114 aa4.28□□□□□ -1.72
LINC00517-202ENST00000554257 LINC01620Q4KN68 170 aa4.28□□□□□ -1.72
LINC00517-202ENST00000554257 FAM30AQ9NZY2 134 aa4.28□□□□□ -1.72
LINC00517-202ENST00000554257 PRSS2P07478 247 aa4.27□□□□□ -1.73
LINC00517-202ENST00000554257 SMIM13P0DJ93 91 aa4.27□□□□□ -1.73
LINC00517-202ENST00000554257 LGALS3P17931 250 aaKnown RBP4.27□□□□□ -1.73
LINC00517-202ENST00000554257 CAMK2N2Q96S95 79 aa4.27□□□□□ -1.73
LINC00517-202ENST00000554257 HERC2O95714 4834 aa4.27□□□□□ -1.73
LINC00517-202ENST00000554257 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.27□□□□□ -1.73
LINC00517-202ENST00000554257 C16orf90A8MZG2 172 aa4.27□□□□□ -1.73
LINC00517-202ENST00000554257 ZNF561-AS1K7EIQ3 104 aa4.27□□□□□ -1.73
LINC00517-202ENST00000554257 C6orf226Q5I0X4 101 aa4.27□□□□□ -1.73
LINC00517-202ENST00000554257 MIEN1Q9BRT3 115 aa4.27□□□□□ -1.73
LINC00517-202ENST00000554257 TOMM7Q9P0U1 55 aa4.27□□□□□ -1.73
LINC00517-202ENST00000554257 FAT1Q14517 4588 aa4.27□□□□□ -1.73
LINC00517-202ENST00000554257 SND1-IT1Q9HBX3 110 aa4.27□□□□□ -1.73
LINC00517-202ENST00000554257 PGPEP1Q9NXJ5 209 aa4.26□□□□□ -1.73
LINC00517-202ENST00000554257 KRTAP11-1Q8IUC1 163 aa4.26□□□□□ -1.73
LINC00517-202ENST00000554257 KIAA1109Q2LD37 5005 aa4.26□□□□□ -1.73
LINC00517-202ENST00000554257 IGKV2-28A0A075B6P5 120 aa4.26□□□□□ -1.73
LINC00517-202ENST00000554257 FAM168BA1KXE4 195 aa4.26□□□□□ -1.73
LINC00517-202ENST00000554257 IGKV2D-28P01615 120 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms