RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 CKS1BP61024 79 aa5.06□□□□□ -1.6
TDP1-209ENST00000554180 C14orf177Q52M58 125 aa5.06□□□□□ -1.6
TDP1-209ENST00000554180 SCGB1D4Q6XE38 83 aa5.06□□□□□ -1.6
TDP1-209ENST00000554180 C2orf91Q6ZV80 131 aa5.06□□□□□ -1.6
TDP1-209ENST00000554180 C6orf223Q8N319 242 aa5.06□□□□□ -1.6
TDP1-209ENST00000554180 MAPKAPK5-AS1Q8N8E1 139 aa5.06□□□□□ -1.6
TDP1-209ENST00000554180 A0A0J9YXY3 114 aa5.05□□□□□ -1.6
TDP1-209ENST00000554180 TMEM238C9JI98 176 aa5.05□□□□□ -1.6
TDP1-209ENST00000554180 USP17L23D6RBM5 183 aa5.05□□□□□ -1.6
TDP1-209ENST00000554180 TIMM17BO60830 172 aa5.05□□□□□ -1.6
TDP1-209ENST00000554180 NTN5Q8WTR8 489 aaPredicted RBP5.05□□□□□ -1.6
TDP1-209ENST00000554180 TP73-AS1Q9UF72 201 aa5.05□□□□□ -1.6
TDP1-209ENST00000554180 DNAH6Q9C0G6 4158 aa5.04□□□□□ -1.6
TDP1-209ENST00000554180 TRBV30A0A0K0K1B3 111 aa5.04□□□□□ -1.6
TDP1-209ENST00000554180 M0R2N4 97 aa5.04□□□□□ -1.6
TDP1-209ENST00000554180 CIRBPQ14011 172 aaKnown RBP5.04□□□□□ -1.6
TDP1-209ENST00000554180 C1orf134Q5TEV5 83 aa5.04□□□□□ -1.6
TDP1-209ENST00000554180 Q6ZVH6 145 aa5.04□□□□□ -1.6
TDP1-209ENST00000554180 SPANXB1Q9NS25 103 aaPredicted RBP5.04□□□□□ -1.6
TDP1-209ENST00000554180 LCE6AA0A183 80 aa5.03□□□□□ -1.6
TDP1-209ENST00000554180 GCSHP23434 173 aa5.03□□□□□ -1.6
TDP1-209ENST00000554180 HSD52Q0P140 79 aa5.03□□□□□ -1.6
TDP1-209ENST00000554180 COX17Q14061 63 aa5.03□□□□□ -1.6
TDP1-209ENST00000554180 TAL2Q16559 108 aa5.03□□□□□ -1.6
TDP1-209ENST00000554180 HIGD2BQ4VC39 106 aa5.03□□□□□ -1.6
TDP1-209ENST00000554180 MEIG1Q5JSS6 88 aa5.03□□□□□ -1.6
TDP1-209ENST00000554180 C2orf82Q6UX34 121 aa5.03□□□□□ -1.6
TDP1-209ENST00000554180 CAMK2N2Q96S95 79 aa5.03□□□□□ -1.6
TDP1-209ENST00000554180 LITAFQ99732 161 aa5.03□□□□□ -1.6
TDP1-209ENST00000554180 KMT2AQ03164 3969 aa5.03□□□□□ -1.6
TDP1-209ENST00000554180 LRCOL1A6NCL2 159 aa5.02□□□□□ -1.61
TDP1-209ENST00000554180 PCP4L1A6NKN8 68 aa5.02□□□□□ -1.61
TDP1-209ENST00000554180 CNBPP62633 177 aaKnown RBP5.02□□□□□ -1.61
TDP1-209ENST00000554180 SYCNQ0VAF6 134 aa5.02□□□□□ -1.61
TDP1-209ENST00000554180 RNF151Q2KHN1 245 aa5.02□□□□□ -1.61
TDP1-209ENST00000554180 COPS9Q8WXC6 57 aa5.02□□□□□ -1.61
TDP1-209ENST00000554180 SPANXDQ9BXN6 97 aa5.02□□□□□ -1.61
TDP1-209ENST00000554180 PPDPFQ9H3Y8 114 aa5.02□□□□□ -1.61
TDP1-209ENST00000554180 SPANXCQ9NY87 97 aa5.02□□□□□ -1.61
TDP1-209ENST00000554180 ERG28Q9UKR5 140 aa5.02□□□□□ -1.61
TDP1-209ENST00000554180 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.01□□□□□ -1.61
TDP1-209ENST00000554180 M0R143 59 aa5.01□□□□□ -1.61
TDP1-209ENST00000554180 IFITM1P13164 125 aa5.01□□□□□ -1.61
TDP1-209ENST00000554180 PTTG1IPP53801 180 aa5.01□□□□□ -1.61
TDP1-209ENST00000554180 CTAG1AP78358 180 aa5.01□□□□□ -1.61
TDP1-209ENST00000554180 SRSF9Q13242 221 aaKnown RBP eCLIP5.01□□□□□ -1.61
TDP1-209ENST00000554180 WFDC2Q14508 124 aa5.01□□□□□ -1.61
TDP1-209ENST00000554180 C10orf25Q5T742 122 aa5.01□□□□□ -1.61
TDP1-209ENST00000554180 UNQ6190/PRO20217Q6UXQ8 127 aa5.01□□□□□ -1.61
TDP1-209ENST00000554180 Q6ZRU5 148 aa5.01□□□□□ -1.61
TDP1-209ENST00000554180 LINC00526Q96FQ7 95 aa5.01□□□□□ -1.61
TDP1-209ENST00000554180 CARD19Q96LW7 228 aa5.01□□□□□ -1.61
TDP1-209ENST00000554180 HIST1H4GQ99525 98 aa5.01□□□□□ -1.61
TDP1-209ENST00000554180 C6orf48Q9UBA6 75 aa5.01□□□□□ -1.61
TDP1-209ENST00000554180 A0A087WTM6 91 aa5□□□□□ -1.61
TDP1-209ENST00000554180 LECT2O14960 151 aa5□□□□□ -1.61
TDP1-209ENST00000554180 SMIM13P0DJ93 91 aa5□□□□□ -1.61
TDP1-209ENST00000554180 ADAMTSL4-AS1Q5T5F5 129 aa5□□□□□ -1.61
TDP1-209ENST00000554180 TMEM238LA0A1B0GVL6 79 aa4.99□□□□□ -1.61
TDP1-209ENST00000554180 NDUFC2-KCTD14E9PQ53 114 aa4.99□□□□□ -1.61
TDP1-209ENST00000554180 TLX1NBP0CAT3 122 aa4.99□□□□□ -1.61
TDP1-209ENST00000554180 PFN2P35080 140 aa4.99□□□□□ -1.61
TDP1-209ENST00000554180 LINC00158P58513 81 aa4.99□□□□□ -1.61
TDP1-209ENST00000554180 CEND1Q8N111 149 aa4.99□□□□□ -1.61
TDP1-209ENST00000554180 MIR7-3HGQ8N6C7 128 aa4.99□□□□□ -1.61
TDP1-209ENST00000554180 Q8N814 137 aa4.99□□□□□ -1.61
TDP1-209ENST00000554180 PKIGQ9Y2B9 76 aa4.99□□□□□ -1.61
TDP1-209ENST00000554180 LOC107984156A0A0G2JMH3 177 aa4.98□□□□□ -1.61
TDP1-209ENST00000554180 EREGO14944 169 aa4.98□□□□□ -1.61
TDP1-209ENST00000554180 SLPIP03973 132 aa4.98□□□□□ -1.61
TDP1-209ENST00000554180 RPL24P83731 157 aaKnown RBP4.98□□□□□ -1.61
TDP1-209ENST00000554180 C9orf116Q5BN46 136 aaPredicted RBP4.98□□□□□ -1.61
TDP1-209ENST00000554180 BVES-AS1Q5T3Y7 98 aa4.98□□□□□ -1.61
TDP1-209ENST00000554180 ARL17AQ8IVW1 177 aa4.98□□□□□ -1.61
TDP1-209ENST00000554180 LINC00308Q8TCZ7 52 aa4.98□□□□□ -1.61
TDP1-209ENST00000554180 A0A0U1RRA0 63 aa4.97□□□□□ -1.61
TDP1-209ENST00000554180 RTL8CO15255 209 aa4.97□□□□□ -1.61
TDP1-209ENST00000554180 HINT1P49773 126 aaPredicted RBP4.97□□□□□ -1.61
TDP1-209ENST00000554180 DAND5Q8N907 189 aa4.97□□□□□ -1.61
TDP1-209ENST00000554180 LOC107984640A0A0U1RRK4 108 aa4.96□□□□□ -1.62
TDP1-209ENST00000554180 FXYD2P54710 66 aa4.96□□□□□ -1.62
TDP1-209ENST00000554180 MUSTN1Q8IVN3 82 aa4.96□□□□□ -1.62
TDP1-209ENST00000554180 SND1-IT1Q9HBX3 110 aa4.96□□□□□ -1.62
TDP1-209ENST00000554180 DNAH10Q8IVF4 4471 aa4.95□□□□□ -1.62
TDP1-209ENST00000554180 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.95□□□□□ -1.62
TDP1-209ENST00000554180 A0A1B0GWB2 263 aa4.95□□□□□ -1.62
TDP1-209ENST00000554180 A4D1N5 150 aa4.95□□□□□ -1.62
TDP1-209ENST00000554180 A6NDN8 102 aa4.95□□□□□ -1.62
TDP1-209ENST00000554180 NDUFC2O95298 119 aa4.95□□□□□ -1.62
TDP1-209ENST00000554180 SOSTDC1Q6X4U4 206 aa4.95□□□□□ -1.62
TDP1-209ENST00000554180 Q6ZRP5 223 aa4.95□□□□□ -1.62
TDP1-209ENST00000554180 LINC00336Q6ZUF6 198 aa4.95□□□□□ -1.62
TDP1-209ENST00000554180 C9orf163Q8N9P6 203 aa4.95□□□□□ -1.62
TDP1-209ENST00000554180 SNHG12Q9BXW3 62 aa4.95□□□□□ -1.62
TDP1-209ENST00000554180 A0A0B4J2C4 111 aa4.94□□□□□ -1.62
TDP1-209ENST00000554180 EIF4EBP3O60516 100 aaPredicted RBP4.94□□□□□ -1.62
TDP1-209ENST00000554180 NPC2P61916 151 aa4.94□□□□□ -1.62
TDP1-209ENST00000554180 RPL18AQ02543 176 aaKnown RBP4.94□□□□□ -1.62
TDP1-209ENST00000554180 TNP2Q05952 138 aa4.94□□□□□ -1.62
TDP1-209ENST00000554180 LBHQ53QV2 105 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms