RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 ODF3Q96PU9 254 aa1.67□□□□□ -2.14
PRPF39-205ENST00000554081 SPANXDQ9BXN6 97 aa1.67□□□□□ -2.14
PRPF39-205ENST00000554081 PKIGQ9Y2B9 76 aa1.67□□□□□ -2.14
PRPF39-205ENST00000554081 LYSTQ99698 3801 aa1.67□□□□□ -2.14
PRPF39-205ENST00000554081 IGLV4-69A0A075B6H9 119 aa1.67□□□□□ -2.14
PRPF39-205ENST00000554081 IGKV2-28A0A075B6P5 120 aa1.67□□□□□ -2.14
PRPF39-205ENST00000554081 IGKV2D-28P01615 120 aa1.67□□□□□ -2.14
PRPF39-205ENST00000554081 RPL37AP61513 92 aaKnown RBP1.67□□□□□ -2.14
PRPF39-205ENST00000554081 HBBP68871 147 aa1.67□□□□□ -2.14
PRPF39-205ENST00000554081 SYCNQ0VAF6 134 aa1.67□□□□□ -2.14
PRPF39-205ENST00000554081 ZNF345Q14585 488 aa1.67□□□□□ -2.14
PRPF39-205ENST00000554081 MIAQ16674 131 aa1.67□□□□□ -2.14
PRPF39-205ENST00000554081 TDRG1Q3Y452 100 aa1.67□□□□□ -2.14
PRPF39-205ENST00000554081 C14orf177Q52M58 125 aa1.67□□□□□ -2.14
PRPF39-205ENST00000554081 Q6ZUT4 128 aa1.67□□□□□ -2.14
PRPF39-205ENST00000554081 Q6ZVH6 145 aa1.67□□□□□ -2.14
PRPF39-205ENST00000554081 GTF2H5Q6ZYL4 71 aa1.67□□□□□ -2.14
PRPF39-205ENST00000554081 MRPL55Q7Z7F7 128 aaKnown RBP1.67□□□□□ -2.14
PRPF39-205ENST00000554081 ORMDL3Q8N138 153 aa1.67□□□□□ -2.14
PRPF39-205ENST00000554081 CIRBP-AS1Q8TBR5 109 aa1.67□□□□□ -2.14
PRPF39-205ENST00000554081 HIGD2AQ9BW72 106 aa1.67□□□□□ -2.14
PRPF39-205ENST00000554081 GFRA4Q9GZZ7 299 aa1.67□□□□□ -2.14
PRPF39-205ENST00000554081 IBA57-AS1B1ANH7 110 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 C9JQL5 133 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 M0QY20 66 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 NPYP01303 97 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 SRP19P09132 144 aaKnown RBP1.66□□□□□ -2.14
PRPF39-205ENST00000554081 UBE2D3P61077 147 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 UBE2D2P62837 147 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 MRPL51Q4U2R6 128 aaKnown RBP1.66□□□□□ -2.14
PRPF39-205ENST00000554081 TEX43Q6ZNM6 134 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 Q6ZRU5 148 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 NTM-AS1Q6ZSK4 140 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 Q8N814 137 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 TSKUQ8WUA8 353 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 CARD19Q96LW7 228 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 SEC11CQ9BY50 192 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 TRAPPC1Q9Y5R8 145 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 SPINK8P0C7L1 97 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 UBE2D1P51668 147 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 COA6Q5JTJ3 125 aaKnown RBP1.66□□□□□ -2.14
PRPF39-205ENST00000554081 PIK3CD-AS1Q5SR53 167 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 ENHOQ6UWT2 76 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 UNQ6190/PRO20217Q6UXQ8 127 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 Q6ZR54 194 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 FAM19A2Q8N3H0 131 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 NKAPP1Q8N9T2 125 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 NAA38Q9BRA0 125 aaKnown RBP1.66□□□□□ -2.14
PRPF39-205ENST00000554081 RYR3Q15413 4870 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 RYR1P21817 5038 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 TMEM250H0YL14 139 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 UBE2AP49459 152 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 LINC00242Q5T6M2 205 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 C2orf66Q6UXQ4 117 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 C20orf203Q8NBC4 194 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 YPEL4Q96NS1 127 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 CHAC1Q9BUX1 264 aa1.66□□□□□ -2.14
PRPF39-205ENST00000554081 EPPK1P58107 5090 aaKnown RBP1.65□□□□□ -2.14
PRPF39-205ENST00000554081 CCDC179H3BU77 68 aa1.65□□□□□ -2.14
PRPF39-205ENST00000554081 DPM2O94777 84 aa1.65□□□□□ -2.14
PRPF39-205ENST00000554081 IGLC6P0CF74 106 aa1.65□□□□□ -2.14
PRPF39-205ENST00000554081 SRSF9Q13242 221 aaKnown RBP eCLIP1.65□□□□□ -2.14
PRPF39-205ENST00000554081 HRCT1Q6UXD1 115 aa1.65□□□□□ -2.14
PRPF39-205ENST00000554081 ZFP2Q6ZN57 461 aa1.65□□□□□ -2.14
PRPF39-205ENST00000554081 HIST1H2BLQ99880 126 aa1.65□□□□□ -2.14
PRPF39-205ENST00000554081 ANAPC11Q9NYG5 84 aa1.65□□□□□ -2.14
PRPF39-205ENST00000554081 LAMTOR3Q9UHA4 124 aa1.65□□□□□ -2.14
PRPF39-205ENST00000554081 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.65□□□□□ -2.14
PRPF39-205ENST00000554081 DNAH1Q9P2D7 4330 aa1.65□□□□□ -2.15
PRPF39-205ENST00000554081 LOC107984640A0A0U1RRK4 108 aa1.65□□□□□ -2.15
PRPF39-205ENST00000554081 LINC00959A0A1B0GUT2 108 aa1.65□□□□□ -2.15
PRPF39-205ENST00000554081 C8orf87E5RJ46 101 aa1.65□□□□□ -2.15
PRPF39-205ENST00000554081 J3QQQ9 107 aa1.65□□□□□ -2.15
PRPF39-205ENST00000554081 NDUFA1O15239 70 aa1.65□□□□□ -2.15
PRPF39-205ENST00000554081 KLK9Q2XQG4 91 aa1.65□□□□□ -2.15
PRPF39-205ENST00000554081 PHF5AQ7RTV0 110 aaKnown RBP1.65□□□□□ -2.15
PRPF39-205ENST00000554081 FAM19A4Q96LR4 140 aa1.65□□□□□ -2.15
PRPF39-205ENST00000554081 DNAH9Q9NYC9 4486 aa1.65□□□□□ -2.15
PRPF39-205ENST00000554081 A0A1B0GXF2 115 aa1.64□□□□□ -2.15
PRPF39-205ENST00000554081 H7C2G1 150 aa1.64□□□□□ -2.15
PRPF39-205ENST00000554081 NDUFV3P56181 108 aaKnown RBP1.64□□□□□ -2.15
PRPF39-205ENST00000554081 FAM104BQ5XKR9 115 aa1.64□□□□□ -2.15
PRPF39-205ENST00000554081 DAND5Q8N907 189 aa1.64□□□□□ -2.15
PRPF39-205ENST00000554081 GNB1LQ9BYB4 327 aa1.64□□□□□ -2.15
PRPF39-205ENST00000554081 MRPL18Q9H0U6 180 aaKnown RBP1.64□□□□□ -2.15
PRPF39-205ENST00000554081 STARD9Q9P2P6 4700 aa1.64□□□□□ -2.15
PRPF39-205ENST00000554081 HUWE1Q7Z6Z7 4374 aaKnown RBP1.64□□□□□ -2.15
PRPF39-205ENST00000554081 ADCYAP1P18509 176 aa1.64□□□□□ -2.15
PRPF39-205ENST00000554081 PRR15Q8IV56 129 aa1.64□□□□□ -2.15
PRPF39-205ENST00000554081 DEFB105AQ8NG35 78 aa1.64□□□□□ -2.15
PRPF39-205ENST00000554081 C2orf48Q96LS8 159 aa1.64□□□□□ -2.15
PRPF39-205ENST00000554081 SMIM2Q9BVW6 85 aa1.64□□□□□ -2.15
PRPF39-205ENST00000554081 OSTCQ9NRP0 149 aa1.64□□□□□ -2.15
PRPF39-205ENST00000554081 TRAV8-4A0A0B4J246 113 aa1.64□□□□□ -2.15
PRPF39-205ENST00000554081 FAM168BA1KXE4 195 aa1.64□□□□□ -2.15
PRPF39-205ENST00000554081 H3BNG1 76 aa1.64□□□□□ -2.15
PRPF39-205ENST00000554081 PANO1I0J062 215 aa1.64□□□□□ -2.15
PRPF39-205ENST00000554081 KRTDAPP60985 99 aa1.64□□□□□ -2.15
PRPF39-205ENST00000554081 SCGB1D4Q6XE38 83 aa1.64□□□□□ -2.15
PRPF39-205ENST00000554081 ATOH7Q8N100 152 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms