RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 HIST1H2BDP58876 126 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 HIST1H2BCP62807 126 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 HERVK_113P63121 156 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 PMVKQ15126 192 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 HIST2H2BEQ16778 126 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 RNF151Q2KHN1 245 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 COA6Q5JTJ3 125 aaKnown RBP4.12□□□□□ -1.75
SLIRP-203ENST00000554074 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.12□□□□□ -1.75
SLIRP-203ENST00000554074 Q6ZRP5 223 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 HIST1H2BHQ93079 126 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 FAM104AQ969W3 186 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 LINC00526Q96FQ7 95 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 C2orf48Q96LS8 159 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 HIST1H2BNQ99877 126 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 HIST1H2BMQ99879 126 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 HSPB8Q9UJY1 196 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 A0A096LNJ9 63 aa4.11□□□□□ -1.75
SLIRP-203ENST00000554074 TRAV12-1A0A0B4J245 112 aa4.11□□□□□ -1.75
SLIRP-203ENST00000554074 IGHV3OR16-9A0A0B4J2B5 98 aa4.11□□□□□ -1.75
SLIRP-203ENST00000554074 A0A0J9YXV3 536 aa4.11□□□□□ -1.75
SLIRP-203ENST00000554074 TINCRA0A1B0GVN0 87 aa4.11□□□□□ -1.75
SLIRP-203ENST00000554074 SERF1AO75920 110 aa4.11□□□□□ -1.75
SLIRP-203ENST00000554074 UBE2D1P51668 147 aa4.11□□□□□ -1.75
SLIRP-203ENST00000554074 SRSF9Q13242 221 aaKnown RBP eCLIP4.11□□□□□ -1.75
SLIRP-203ENST00000554074 REG3GQ6UW15 175 aa4.11□□□□□ -1.75
SLIRP-203ENST00000554074 OR10D4PQ8NGN7 298 aa4.11□□□□□ -1.75
SLIRP-203ENST00000554074 CST9LQ9H4G1 147 aa4.11□□□□□ -1.75
SLIRP-203ENST00000554074 A0A087WZ39 114 aa4.1□□□□□ -1.75
SLIRP-203ENST00000554074 LEPROTL1O95214 131 aa4.1□□□□□ -1.75
SLIRP-203ENST00000554074 LINC00242Q5T6M2 205 aa4.1□□□□□ -1.75
SLIRP-203ENST00000554074 LINC00173Q6ZV60 143 aa4.1□□□□□ -1.75
SLIRP-203ENST00000554074 IFI27L1Q96BM0 104 aa4.1□□□□□ -1.75
SLIRP-203ENST00000554074 CAMK2N2Q96S95 79 aa4.1□□□□□ -1.75
SLIRP-203ENST00000554074 OPRPNQ99935 248 aaPredicted RBP4.1□□□□□ -1.75
SLIRP-203ENST00000554074 GEMIN7Q9H840 131 aaKnown RBP4.1□□□□□ -1.75
SLIRP-203ENST00000554074 TNXBP22105 4242 aa4.1□□□□□ -1.75
SLIRP-203ENST00000554074 IGLV5-45A0A087WSX0 123 aa4.09□□□□□ -1.75
SLIRP-203ENST00000554074 H3BRM9 83 aa4.09□□□□□ -1.75
SLIRP-203ENST00000554074 AKR1D1P51857 326 aa4.09□□□□□ -1.75
SLIRP-203ENST00000554074 LINC00310P59036 64 aa4.09□□□□□ -1.75
SLIRP-203ENST00000554074 KRTAP10-8P60410 259 aa4.09□□□□□ -1.75
SLIRP-203ENST00000554074 GAGE2BQ13066 116 aa4.09□□□□□ -1.75
SLIRP-203ENST00000554074 RNASE13Q5GAN3 156 aaKnown RBP4.09□□□□□ -1.75
SLIRP-203ENST00000554074 C5orf38Q86SI9 138 aa4.09□□□□□ -1.75
SLIRP-203ENST00000554074 MRPL35Q9NZE8 188 aaKnown RBP4.09□□□□□ -1.75
SLIRP-203ENST00000554074 TLX1NBP0CAT3 122 aa4.08□□□□□ -1.76
SLIRP-203ENST00000554074 IGLC3P0DOY3 106 aa4.08□□□□□ -1.76
SLIRP-203ENST00000554074 SPAG11BQ08648 103 aa4.08□□□□□ -1.76
SLIRP-203ENST00000554074 PMCHL1Q16048 86 aa4.08□□□□□ -1.76
SLIRP-203ENST00000554074 A0A1W2PNN7 141 aa4.07□□□□□ -1.76
SLIRP-203ENST00000554074 F8VRH5 84 aa4.07□□□□□ -1.76
SLIRP-203ENST00000554074 NDUFA1O15239 70 aa4.07□□□□□ -1.76
SLIRP-203ENST00000554074 S100A6P06703 90 aa4.07□□□□□ -1.76
SLIRP-203ENST00000554074 PLNP26678 52 aa4.07□□□□□ -1.76
SLIRP-203ENST00000554074 CXCL5P42830 114 aa4.07□□□□□ -1.76
SLIRP-203ENST00000554074 NDUFA6P56556 154 aa4.07□□□□□ -1.76
SLIRP-203ENST00000554074 RPL18AQ02543 176 aaKnown RBP4.07□□□□□ -1.76
SLIRP-203ENST00000554074 C9orf116Q5BN46 136 aaPredicted RBP4.07□□□□□ -1.76
SLIRP-203ENST00000554074 SFTA2Q6UW10 78 aa4.07□□□□□ -1.76
SLIRP-203ENST00000554074 FAM19A2Q8N3H0 131 aa4.07□□□□□ -1.76
SLIRP-203ENST00000554074 MAP1LC3CQ9BXW4 147 aa4.07□□□□□ -1.76
SLIRP-203ENST00000554074 CHTOPQ9Y3Y2 248 aaKnown RBP4.07□□□□□ -1.76
SLIRP-203ENST00000554074 RNF213Q63HN8 5207 aa4.07□□□□□ -1.76
SLIRP-203ENST00000554074 NUPR1O60356 82 aa4.06□□□□□ -1.76
SLIRP-203ENST00000554074 XP32Q5T750 250 aa4.06□□□□□ -1.76
SLIRP-203ENST00000554074 Q8IZM0 81 aa4.06□□□□□ -1.76
SLIRP-203ENST00000554074 LINC00469Q8N7U9 141 aa4.06□□□□□ -1.76
SLIRP-203ENST00000554074 ORAOV1Q8WV07 137 aa4.06□□□□□ -1.76
SLIRP-203ENST00000554074 PSORS1C2Q9UIG4 136 aa4.06□□□□□ -1.76
SLIRP-203ENST00000554074 TRBV30A0A0K0K1B3 111 aa4.05□□□□□ -1.76
SLIRP-203ENST00000554074 PRSS2P07478 247 aa4.05□□□□□ -1.76
SLIRP-203ENST00000554074 ODF1Q14990 250 aa4.05□□□□□ -1.76
SLIRP-203ENST00000554074 ZC2HC1BQ5TFG8 222 aa4.05□□□□□ -1.76
SLIRP-203ENST00000554074 PET117Q6UWS5 81 aa4.05□□□□□ -1.76
SLIRP-203ENST00000554074 CDKN2A-AS1Q9UH64 79 aa4.05□□□□□ -1.76
SLIRP-203ENST00000554074 IGLV5-39A0A0G2JS06 123 aa4.04□□□□□ -1.76
SLIRP-203ENST00000554074 C20orf202A1L168 122 aa4.04□□□□□ -1.76
SLIRP-203ENST00000554074 C11orf86A6NJI1 115 aa4.04□□□□□ -1.76
SLIRP-203ENST00000554074 SMIM1B2RUZ4 78 aa4.04□□□□□ -1.76
SLIRP-203ENST00000554074 SYS1-DBNDD2H3BUS1 97 aa4.04□□□□□ -1.76
SLIRP-203ENST00000554074 DPM2O94777 84 aa4.04□□□□□ -1.76
SLIRP-203ENST00000554074 FABP4P15090 132 aa4.04□□□□□ -1.76
SLIRP-203ENST00000554074 ZNF22P17026 224 aaPredicted RBP4.04□□□□□ -1.76
SLIRP-203ENST00000554074 S100A2P29034 98 aa4.04□□□□□ -1.76
SLIRP-203ENST00000554074 KIAA0087Q14695 138 aa4.04□□□□□ -1.76
SLIRP-203ENST00000554074 C6orf226Q5I0X4 101 aa4.04□□□□□ -1.76
SLIRP-203ENST00000554074 C1orf137Q5JT78 98 aa4.04□□□□□ -1.76
SLIRP-203ENST00000554074 C10orf25Q5T742 122 aa4.04□□□□□ -1.76
SLIRP-203ENST00000554074 UNQ6190/PRO20217Q6UXQ8 127 aa4.04□□□□□ -1.76
SLIRP-203ENST00000554074 PHF5AQ7RTV0 110 aaKnown RBP4.04□□□□□ -1.76
SLIRP-203ENST00000554074 C6orf48Q9UBA6 75 aa4.04□□□□□ -1.76
SLIRP-203ENST00000554074 LRP2P98164 4655 aa4.04□□□□□ -1.76
SLIRP-203ENST00000554074 NDUFC2-KCTD14E9PQ53 114 aa4.03□□□□□ -1.76
SLIRP-203ENST00000554074 IGKCP01834 107 aa4.03□□□□□ -1.76
SLIRP-203ENST00000554074 IGLV7-43P04211 117 aa4.03□□□□□ -1.76
SLIRP-203ENST00000554074 CKS1BP61024 79 aa4.03□□□□□ -1.76
SLIRP-203ENST00000554074 HERVK_113P61574 105 aa4.03□□□□□ -1.76
SLIRP-203ENST00000554074 TMEM170BQ5T4T1 132 aa4.03□□□□□ -1.76
SLIRP-203ENST00000554074 LINC01545Q5VT33 79 aa4.03□□□□□ -1.76
SLIRP-203ENST00000554074 HIST3H2BBQ8N257 126 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms