RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 F8WDY8 70 aa6.95□□□□□ -1.3
TMEM55B-205ENST00000554028 CIRBPQ14011 172 aaKnown RBP6.95□□□□□ -1.3
TMEM55B-205ENST00000554028 C14orf177Q52M58 125 aa6.95□□□□□ -1.3
TMEM55B-205ENST00000554028 C1orf134Q5TEV5 83 aa6.95□□□□□ -1.3
TMEM55B-205ENST00000554028 Q6ZR54 194 aa6.95□□□□□ -1.3
TMEM55B-205ENST00000554028 BOD1L2Q8IYS8 172 aa6.95□□□□□ -1.3
TMEM55B-205ENST00000554028 MIEN1Q9BRT3 115 aa6.95□□□□□ -1.3
TMEM55B-205ENST00000554028 USP17L23D6RBM5 183 aa6.94□□□□□ -1.3
TMEM55B-205ENST00000554028 NDUFA1O15239 70 aa6.94□□□□□ -1.3
TMEM55B-205ENST00000554028 TSPEAR-AS2P59090 65 aa6.94□□□□□ -1.3
TMEM55B-205ENST00000554028 TENM2Q9NT68 2774 aa6.93□□□□□ -1.3
TMEM55B-205ENST00000554028 HIGD2BQ4VC39 106 aa6.93□□□□□ -1.3
TMEM55B-205ENST00000554028 MAPKAPK5-AS1Q8N8E1 139 aa6.93□□□□□ -1.3
TMEM55B-205ENST00000554028 C2orf48Q96LS8 159 aa6.93□□□□□ -1.3
TMEM55B-205ENST00000554028 CAMK2N2Q96S95 79 aa6.93□□□□□ -1.3
TMEM55B-205ENST00000554028 KRTAP4-7Q9BYR0 210 aa6.93□□□□□ -1.3
TMEM55B-205ENST00000554028 TTTY13Q9BZ97 58 aa6.93□□□□□ -1.3
TMEM55B-205ENST00000554028 DYNC2H1Q8NCM8 4307 aaKnown RBP6.92□□□□□ -1.3
TMEM55B-205ENST00000554028 GVQW2A0A096LPI5 108 aaPredicted RBP6.92□□□□□ -1.3
TMEM55B-205ENST00000554028 LCE6AA0A183 80 aa6.92□□□□□ -1.3
TMEM55B-205ENST00000554028 HNRNPA3P51991 378 aaKnown RBP6.92□□□□□ -1.3
TMEM55B-205ENST00000554028 KIAA0087Q14695 138 aa6.92□□□□□ -1.3
TMEM55B-205ENST00000554028 MEIG1Q5JSS6 88 aa6.92□□□□□ -1.3
TMEM55B-205ENST00000554028 C15orf56Q8N910 161 aa6.92□□□□□ -1.3
TMEM55B-205ENST00000554028 NTN5Q8WTR8 489 aaPredicted RBP6.92□□□□□ -1.3
TMEM55B-205ENST00000554028 DNAH7Q8WXX0 4024 aa6.92□□□□□ -1.3
TMEM55B-205ENST00000554028 EREGO14944 169 aa6.91□□□□□ -1.3
TMEM55B-205ENST00000554028 LECT2O14960 151 aa6.91□□□□□ -1.3
TMEM55B-205ENST00000554028 ZNF625Q96I27 306 aaPredicted RBP6.91□□□□□ -1.3
TMEM55B-205ENST00000554028 A0A0J9YXY3 114 aa6.9□□□□□ -1.3
TMEM55B-205ENST00000554028 TMEM238C9JI98 176 aa6.9□□□□□ -1.3
TMEM55B-205ENST00000554028 GCSHP23434 173 aa6.9□□□□□ -1.3
TMEM55B-205ENST00000554028 SYCNQ0VAF6 134 aa6.9□□□□□ -1.3
TMEM55B-205ENST00000554028 C2orf82Q6UX34 121 aa6.9□□□□□ -1.3
TMEM55B-205ENST00000554028 HIGD1BQ9P298 99 aa6.9□□□□□ -1.3
TMEM55B-205ENST00000554028 CSMD3Q7Z407 3707 aa6.9□□□□□ -1.31
TMEM55B-205ENST00000554028 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.89□□□□□ -1.31
TMEM55B-205ENST00000554028 TRBV30A0A0K0K1B3 111 aa6.89□□□□□ -1.31
TMEM55B-205ENST00000554028 PCP4L1A6NKN8 68 aa6.89□□□□□ -1.31
TMEM55B-205ENST00000554028 TIMM17BO60830 172 aa6.89□□□□□ -1.31
TMEM55B-205ENST00000554028 DDTP30046 118 aa6.89□□□□□ -1.31
TMEM55B-205ENST00000554028 LINC00158P58513 81 aa6.89□□□□□ -1.31
TMEM55B-205ENST00000554028 SRSF9Q13242 221 aaKnown RBP eCLIP6.89□□□□□ -1.31
TMEM55B-205ENST00000554028 UNQ6190/PRO20217Q6UXQ8 127 aa6.89□□□□□ -1.31
TMEM55B-205ENST00000554028 Q6ZRN7 208 aaPredicted RBP6.89□□□□□ -1.31
TMEM55B-205ENST00000554028 COPS9Q8WXC6 57 aa6.89□□□□□ -1.31
TMEM55B-205ENST00000554028 LINC00526Q96FQ7 95 aa6.89□□□□□ -1.31
TMEM55B-205ENST00000554028 COX17Q14061 63 aa6.88□□□□□ -1.31
TMEM55B-205ENST00000554028 Q6ZVH6 145 aa6.88□□□□□ -1.31
TMEM55B-205ENST00000554028 HIST1H4GQ99525 98 aa6.88□□□□□ -1.31
TMEM55B-205ENST00000554028 ERG28Q9UKR5 140 aa6.88□□□□□ -1.31
TMEM55B-205ENST00000554028 STARD9Q9P2P6 4700 aa6.88□□□□□ -1.31
TMEM55B-205ENST00000554028 PFN2P35080 140 aa6.87□□□□□ -1.31
TMEM55B-205ENST00000554028 RNF151Q2KHN1 245 aa6.87□□□□□ -1.31
TMEM55B-205ENST00000554028 LCE1DQ5T752 114 aa6.87□□□□□ -1.31
TMEM55B-205ENST00000554028 CARD19Q96LW7 228 aa6.87□□□□□ -1.31
TMEM55B-205ENST00000554028 A0A087WTM6 91 aa6.86□□□□□ -1.31
TMEM55B-205ENST00000554028 A0A0U1RRA0 63 aa6.86□□□□□ -1.31
TMEM55B-205ENST00000554028 LRCOL1A6NCL2 159 aa6.86□□□□□ -1.31
TMEM55B-205ENST00000554028 SMIM13P0DJ93 91 aa6.86□□□□□ -1.31
TMEM55B-205ENST00000554028 TAL2Q16559 108 aa6.86□□□□□ -1.31
TMEM55B-205ENST00000554028 Q6ZRU5 148 aa6.86□□□□□ -1.31
TMEM55B-205ENST00000554028 C2orf91Q6ZV80 131 aa6.86□□□□□ -1.31
TMEM55B-205ENST00000554028 SPANXB1Q9NS25 103 aaPredicted RBP6.86□□□□□ -1.31
TMEM55B-205ENST00000554028 PKIGQ9Y2B9 76 aa6.86□□□□□ -1.31
TMEM55B-205ENST00000554028 PLECQ15149 4684 aaKnown RBP6.86□□□□□ -1.31
TMEM55B-205ENST00000554028 IFITM1P13164 125 aa6.85□□□□□ -1.31
TMEM55B-205ENST00000554028 CTAG1AP78358 180 aa6.85□□□□□ -1.31
TMEM55B-205ENST00000554028 HSD52Q0P140 79 aa6.85□□□□□ -1.31
TMEM55B-205ENST00000554028 C10orf25Q5T742 122 aa6.85□□□□□ -1.31
TMEM55B-205ENST00000554028 Q8N814 137 aa6.85□□□□□ -1.31
TMEM55B-205ENST00000554028 C6orf48Q9UBA6 75 aa6.85□□□□□ -1.31
TMEM55B-205ENST00000554028 TP73-AS1Q9UF72 201 aa6.85□□□□□ -1.31
TMEM55B-205ENST00000554028 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.84□□□□□ -1.31
TMEM55B-205ENST00000554028 M0R143 59 aa6.84□□□□□ -1.31
TMEM55B-205ENST00000554028 CNBPP62633 177 aaKnown RBP6.84□□□□□ -1.31
TMEM55B-205ENST00000554028 WFDC2Q14508 124 aa6.84□□□□□ -1.31
TMEM55B-205ENST00000554028 SPANXDQ9BXN6 97 aa6.84□□□□□ -1.31
TMEM55B-205ENST00000554028 SPANXCQ9NY87 97 aa6.84□□□□□ -1.31
TMEM55B-205ENST00000554028 PTTG1IPP53801 180 aa6.83□□□□□ -1.32
TMEM55B-205ENST00000554028 RPL24P83731 157 aaKnown RBP6.83□□□□□ -1.32
TMEM55B-205ENST00000554028 C9orf116Q5BN46 136 aaPredicted RBP6.83□□□□□ -1.32
TMEM55B-205ENST00000554028 MIR7-3HGQ8N6C7 128 aa6.83□□□□□ -1.32
TMEM55B-205ENST00000554028 TMEM238LA0A1B0GVL6 79 aa6.82□□□□□ -1.32
TMEM55B-205ENST00000554028 A6NJY4 79 aa6.82□□□□□ -1.32
TMEM55B-205ENST00000554028 NDUFC2-KCTD14E9PQ53 114 aa6.82□□□□□ -1.32
TMEM55B-205ENST00000554028 ADAMTSL4-AS1Q5T5F5 129 aa6.82□□□□□ -1.32
TMEM55B-205ENST00000554028 CEND1Q8N111 149 aa6.82□□□□□ -1.32
TMEM55B-205ENST00000554028 LITAFQ99732 161 aa6.82□□□□□ -1.32
TMEM55B-205ENST00000554028 LOC107984640A0A0U1RRK4 108 aa6.81□□□□□ -1.32
TMEM55B-205ENST00000554028 RTL8CO15255 209 aa6.81□□□□□ -1.32
TMEM55B-205ENST00000554028 SLPIP03973 132 aa6.81□□□□□ -1.32
TMEM55B-205ENST00000554028 LINC00336Q6ZUF6 198 aa6.81□□□□□ -1.32
TMEM55B-205ENST00000554028 MUSTN1Q8IVN3 82 aa6.81□□□□□ -1.32
TMEM55B-205ENST00000554028 DAND5Q8N907 189 aa6.81□□□□□ -1.32
TMEM55B-205ENST00000554028 LINC00308Q8TCZ7 52 aa6.81□□□□□ -1.32
TMEM55B-205ENST00000554028 BIRC6Q9NR09 4857 aa6.81□□□□□ -1.32
TMEM55B-205ENST00000554028 TLX1NBP0CAT3 122 aa6.8□□□□□ -1.32
TMEM55B-205ENST00000554028 HINT1P49773 126 aaPredicted RBP6.8□□□□□ -1.32
TMEM55B-205ENST00000554028 NPC2P61916 151 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms