RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 XCL1P47992 114 aa6.42□□□□□ -1.38
AL049839.2-201ENST00000553947 BEAN1Q3B7T3 259 aa6.42□□□□□ -1.38
AL049839.2-201ENST00000553947 COPS9Q8WXC6 57 aa6.42□□□□□ -1.38
AL049839.2-201ENST00000553947 UBE2D4Q9Y2X8 147 aa6.42□□□□□ -1.38
AL049839.2-201ENST00000553947 C22orf24Q9Y442 160 aa6.42□□□□□ -1.38
AL049839.2-201ENST00000553947 TIMM17BO60830 172 aa6.42□□□□□ -1.38
AL049839.2-201ENST00000553947 PIK3CD-AS1Q5SR53 167 aa6.42□□□□□ -1.38
AL049839.2-201ENST00000553947 NCR3O14931 201 aa6.41□□□□□ -1.38
AL049839.2-201ENST00000553947 GIG44P09565 113 aaPredicted RBP6.41□□□□□ -1.38
AL049839.2-201ENST00000553947 C9orf129Q5T035 196 aaKnown RBP6.41□□□□□ -1.38
AL049839.2-201ENST00000553947 CDKN2A-AS1Q9UH64 79 aa6.41□□□□□ -1.38
AL049839.2-201ENST00000553947 JMJD1CQ15652 2540 aa6.41□□□□□ -1.38
AL049839.2-201ENST00000553947 IGHV3-53P01767 116 aa6.41□□□□□ -1.38
AL049839.2-201ENST00000553947 RBM3P98179 157 aaKnown RBP6.41□□□□□ -1.38
AL049839.2-201ENST00000553947 DGAT2L7PQ6IED9 249 aa6.41□□□□□ -1.38
AL049839.2-201ENST00000553947 CHCHD7Q9BUK0 85 aa6.41□□□□□ -1.38
AL049839.2-201ENST00000553947 SMIM26A0A096LP01 95 aa6.41□□□□□ -1.38
AL049839.2-201ENST00000553947 RPL28P46779 137 aaKnown RBP6.41□□□□□ -1.38
AL049839.2-201ENST00000553947 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.4□□□□□ -1.38
AL049839.2-201ENST00000553947 IGKV2-29A2NJV5 120 aaPredicted RBP6.4□□□□□ -1.38
AL049839.2-201ENST00000553947 IL17DQ8TAD2 202 aa6.4□□□□□ -1.38
AL049839.2-201ENST00000553947 TRGV1A0A0A0MS02 117 aa6.4□□□□□ -1.39
AL049839.2-201ENST00000553947 CRPP02741 224 aa6.4□□□□□ -1.39
AL049839.2-201ENST00000553947 KRTAP10-3P60369 221 aa6.4□□□□□ -1.39
AL049839.2-201ENST00000553947 ENHOQ6UWT2 76 aa6.4□□□□□ -1.39
AL049839.2-201ENST00000553947 Q6ZTI0 123 aa6.4□□□□□ -1.39
AL049839.2-201ENST00000553947 FAM19A1Q7Z5A9 133 aa6.4□□□□□ -1.39
AL049839.2-201ENST00000553947 C19orf73Q9NVV2 129 aa6.4□□□□□ -1.39
AL049839.2-201ENST00000553947 NDUFA1O15239 70 aa6.39□□□□□ -1.39
AL049839.2-201ENST00000553947 IGLV1-51P01701 117 aa6.39□□□□□ -1.39
AL049839.2-201ENST00000553947 GCN1Q92616 2671 aaKnown RBP6.39□□□□□ -1.39
AL049839.2-201ENST00000553947 SOSTDC1Q6X4U4 206 aa6.39□□□□□ -1.39
AL049839.2-201ENST00000553947 SNURFQ9Y675 71 aa6.39□□□□□ -1.39
AL049839.2-201ENST00000553947 NOTCH3Q9UM47 2321 aa6.38□□□□□ -1.39
AL049839.2-201ENST00000553947 HECTD1Q9ULT8 2610 aa6.38□□□□□ -1.39
AL049839.2-201ENST00000553947 A0A087WYN8 130 aa6.38□□□□□ -1.39
AL049839.2-201ENST00000553947 LECT2O14960 151 aa6.38□□□□□ -1.39
AL049839.2-201ENST00000553947 SLPIP03973 132 aa6.38□□□□□ -1.39
AL049839.2-201ENST00000553947 S100A7L2Q5SY68 101 aa6.38□□□□□ -1.39
AL049839.2-201ENST00000553947 LINC00474Q9P2X8 69 aa6.38□□□□□ -1.39
AL049839.2-201ENST00000553947 OVOL2Q9BRP0 275 aa6.37□□□□□ -1.39
AL049839.2-201ENST00000553947 PLAC8L1A1L4L8 177 aa6.37□□□□□ -1.39
AL049839.2-201ENST00000553947 LY6G6DO95868 133 aa6.37□□□□□ -1.39
AL049839.2-201ENST00000553947 NOP10Q9NPE3 64 aaKnown RBP6.37□□□□□ -1.39
AL049839.2-201ENST00000553947 HIVEP2P31629 2446 aa6.37□□□□□ -1.39
AL049839.2-201ENST00000553947 TRAV13-2A0A0B4J235 113 aa6.36□□□□□ -1.39
AL049839.2-201ENST00000553947 H7BZZ5 65 aa6.36□□□□□ -1.39
AL049839.2-201ENST00000553947 FP248Q71RG6 208 aaPredicted RBP6.36□□□□□ -1.39
AL049839.2-201ENST00000553947 MPLKIPQ8TAP9 179 aa6.36□□□□□ -1.39
AL049839.2-201ENST00000553947 CSNK1G2-AS1Q8NCQ2 148 aa6.36□□□□□ -1.39
AL049839.2-201ENST00000553947 C2CD3Q4AC94 2353 aa6.36□□□□□ -1.39
AL049839.2-201ENST00000553947 OTOGQ6ZRI0 2925 aa6.35□□□□□ -1.39
AL049839.2-201ENST00000553947 F8WEM9 126 aa6.35□□□□□ -1.39
AL049839.2-201ENST00000553947 RPL36AP83881 106 aaKnown RBP6.35□□□□□ -1.39
AL049839.2-201ENST00000553947 RPL36ALQ969Q0 106 aaKnown RBP6.35□□□□□ -1.39
AL049839.2-201ENST00000553947 NTM-AS1Q6ZSK4 140 aa6.35□□□□□ -1.39
AL049839.2-201ENST00000553947 SPATA3Q8NHX4 192 aa6.35□□□□□ -1.39
AL049839.2-201ENST00000553947 MIR7-3HGQ8N6C7 128 aa6.34□□□□□ -1.39
AL049839.2-201ENST00000553947 RMI2Q96E14 147 aa6.34□□□□□ -1.39
AL049839.2-201ENST00000553947 UBL5Q9BZL1 73 aa6.34□□□□□ -1.39
AL049839.2-201ENST00000553947 K7EQD1 137 aa6.34□□□□□ -1.39
AL049839.2-201ENST00000553947 SS18Q15532 418 aa6.34□□□□□ -1.39
AL049839.2-201ENST00000553947 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.34□□□□□ -1.39
AL049839.2-201ENST00000553947 TRBV7-6A0A0J9YX20 115 aa6.34□□□□□ -1.4
AL049839.2-201ENST00000553947 CMC4P56277 68 aaPredicted RBP6.34□□□□□ -1.4
AL049839.2-201ENST00000553947 COX6A2Q02221 97 aa6.34□□□□□ -1.4
AL049839.2-201ENST00000553947 SMIM11BQ8TCY0 68 aa6.34□□□□□ -1.4
AL049839.2-201ENST00000553947 NOTCH2Q04721 2471 aa6.34□□□□□ -1.4
AL049839.2-201ENST00000553947 LOC100131303A0A0U1RQF7 123 aa6.33□□□□□ -1.4
AL049839.2-201ENST00000553947 LYPD5Q6UWN5 251 aa6.33□□□□□ -1.4
AL049839.2-201ENST00000553947 SND1-IT1Q9HBX3 110 aa6.33□□□□□ -1.4
AL049839.2-201ENST00000553947 H0YGX0 51 aa6.33□□□□□ -1.4
AL049839.2-201ENST00000553947 CCKP06307 115 aa6.33□□□□□ -1.4
AL049839.2-201ENST00000553947 VWFP04275 2813 aa6.32□□□□□ -1.4
AL049839.2-201ENST00000553947 INAFM1C9JVW0 142 aa6.32□□□□□ -1.4
AL049839.2-201ENST00000553947 PF4P02776 101 aa6.32□□□□□ -1.4
AL049839.2-201ENST00000553947 LINC00337Q8N6G1 96 aa6.32□□□□□ -1.4
AL049839.2-201ENST00000553947 LINC00482Q8N8I6 264 aa6.32□□□□□ -1.4
AL049839.2-201ENST00000553947 C16orf74Q96GX8 76 aa6.32□□□□□ -1.4
AL049839.2-201ENST00000553947 ORMDL1Q9P0S3 153 aa6.32□□□□□ -1.4
AL049839.2-201ENST00000553947 TRAV7A0A075B6U4 112 aa6.32□□□□□ -1.4
AL049839.2-201ENST00000553947 ATP5EP2Q5VTU8 51 aa6.32□□□□□ -1.4
AL049839.2-201ENST00000553947 TOMM7Q9P0U1 55 aa6.32□□□□□ -1.4
AL049839.2-201ENST00000553947 TRGV2A0A075B6R0 118 aa6.31□□□□□ -1.4
AL049839.2-201ENST00000553947 TRBV10-1A0A0K0K1A3 114 aa6.31□□□□□ -1.4
AL049839.2-201ENST00000553947 LINC00158P58513 81 aa6.31□□□□□ -1.4
AL049839.2-201ENST00000553947 HAMPP81172 84 aa6.31□□□□□ -1.4
AL049839.2-201ENST00000553947 FN1P02751 2386 aaKnown RBP6.31□□□□□ -1.4
AL049839.2-201ENST00000553947 EPM2AB3EWF7 344 aa6.31□□□□□ -1.4
AL049839.2-201ENST00000553947 PAX4O43316 350 aa6.3□□□□□ -1.4
AL049839.2-201ENST00000553947 LINC00242Q5T6M2 205 aa6.3□□□□□ -1.4
AL049839.2-201ENST00000553947 IGLV5-45A0A087WSX0 123 aa6.29□□□□□ -1.4
AL049839.2-201ENST00000553947 SMIM1B2RUZ4 78 aa6.29□□□□□ -1.4
AL049839.2-201ENST00000553947 OBSCN-AS1Q96MR7 158 aa6.29□□□□□ -1.4
AL049839.2-201ENST00000553947 TENM1Q9UKZ4 2725 aa6.28□□□□□ -1.4
AL049839.2-201ENST00000553947 IGLV5-39A0A0G2JS06 123 aa6.28□□□□□ -1.4
AL049839.2-201ENST00000553947 NSD1Q96L73 2696 aaPredicted RBP6.28□□□□□ -1.4
AL049839.2-201ENST00000553947 TRGV4A0A0C4DH28 118 aa6.28□□□□□ -1.4
AL049839.2-201ENST00000553947 JMJD7-PLA2G4BH0Y9G9 81 aa6.28□□□□□ -1.4
AL049839.2-201ENST00000553947 KLKP1Q107X0 134 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms